RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	NUM1	Q00402	2748 aa		0.68	□□□□□ -2.3
SEC1	YDR164C	URA2	P07259	2214 aa	Known RBP	0.68	□□□□□ -2.3
SEC1	YDR164C	YAL064W-B	O13512	126 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	COX5B	P00425	151 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	TPI1	P00942	248 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	YGL041W-A	P0C5N3	154 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MRP1	P10662	321 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	URA5	P13298	226 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	RPB5	P20434	215 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	UTR1	P21373	530 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SPO13	P23624	291 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	EXG1	P23776	448 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	TAH1	P25638	111 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	AHC2	P25649	128 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PMT2	P31382	759 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YPS1	P32329	569 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SPT14	P32363	452 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	ERG24	P32462	438 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	HSP150	P32478	413 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PDC2	P32896	925 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MRPS5	P33759	307 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	DOA1	P36037	715 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YKL162C	P36052	402 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PMU1	P36069	295 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SRX1	P36077	127 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YKL070W	P36087	169 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SRL3	P36167	246 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	DTR1	P38125	572 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	CHK1	P38147	527 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	UMP1	P38293	148 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	GOS1	P38736	223 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	LSM12	P38828	187 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	SOP4	P39543	234 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	FCY21	P40039	528 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PRE6	P40303	254 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	PHB1	P40961	287 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	CDC40	P40968	455 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	OST1	P41543	476 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	PFS2	P42841	465 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	BXI1	P48558	297 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	CGR1	P53188	120 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MPA43	P53583	542 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	CAF40	P53829	373 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	RNH201	P53942	307 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	HXT11	P54862	567 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SPP2	Q02521	185 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PET191	Q02772	108 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	ARL3	Q02804	198 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SNO1	Q03144	224 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MRPS17	Q03246	237 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	YDR248C	Q03786	193 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PKR1	Q03880	122 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	GMC1	Q04399	608 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	ELP6	Q04868	273 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MRX8	Q05473	314 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	NNT1	Q05874	261 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	RRG8	Q06109	277 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	ARR2	Q06597	130 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YPR174C	Q06616	221 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	MRPL35	Q06678	367 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YDL114W	Q07530	308 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	GAT3	Q07928	141 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	RRT8	Q08219	342 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SYC1	Q08553	188 aa	Predicted RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	YOR015W	Q12169	119 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	AYT1	Q12226	474 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	TPO4	Q12256	659 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YLR108C	Q12259	485 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	TPT1	Q12272	230 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	DGK1	Q12382	290 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YOP1	Q12402	180 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PAA1	Q12447	191 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	YOR192C-C	Q3E736	78 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PCC1	Q3E833	88 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SCS22	Q6Q595	175 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YCL021W-A	Q96VH3	125 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	YOR338W	Q99326	363 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	TOR1	P35169	2470 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MSB2	P32334	1306 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SEC16	P48415	2195 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
SEC1	YDR164C	RPL25	P04456	142 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	ARG80	P07249	177 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	RPL18A	P0CX49	186 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	RPL18B	P0CX50	186 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	PET54	P10834	293 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MSI1	P13712	422 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	URA6	P15700	204 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	RPB3	P16370	318 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	FUS3	P16892	353 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	CKS1	P20486	150 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	SEC22	P22214	214 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	MRP17	P28778	131 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	VMA5	P31412	392 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	ACP1	P32463	125 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	SRB6	P32570	121 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	PAU2	P32612	120 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	RAD23	P32628	398 aa	Known RBP	0.67	□□□□□ -2.3
SEC1	YDR164C	TIM12	P32830	109 aa		0.67	□□□□□ -2.3
SEC1	YDR164C	CLG1	P35190	452 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms