RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C RMI1Q02685 241 aa3.52□□□□□ -1.85
CDC9YDL164C YMR244WQ04018 355 aa3.52□□□□□ -1.85
CDC9YDL164C EMI1Q04406 187 aa3.52□□□□□ -1.85
CDC9YDL164C SYC1Q08553 188 aaPredicted RBP3.52□□□□□ -1.85
CDC9YDL164C PRR2Q12310 699 aa3.52□□□□□ -1.85
CDC9YDL164C CDC25P04821 1589 aa3.52□□□□□ -1.85
CDC9YDL164C CDC7P06243 507 aa3.51□□□□□ -1.85
CDC9YDL164C CDC43P18898 376 aa3.51□□□□□ -1.85
CDC9YDL164C IDP1P21954 428 aaKnown RBP3.51□□□□□ -1.85
CDC9YDL164C EPT1P22140 391 aa3.51□□□□□ -1.85
CDC9YDL164C PEX2P32800 271 aa3.51□□□□□ -1.85
CDC9YDL164C RPS1AP33442 255 aaKnown RBP3.51□□□□□ -1.85
CDC9YDL164C CSG2P35206 410 aa3.51□□□□□ -1.85
CDC9YDL164C RRG9P40156 214 aa3.51□□□□□ -1.85
CDC9YDL164C PCI8P40512 444 aa3.51□□□□□ -1.85
CDC9YDL164C DIM1P41819 318 aaKnown RBP3.51□□□□□ -1.85
CDC9YDL164C APS3P47064 194 aa3.51□□□□□ -1.85
CDC9YDL164C CRH1P53301 507 aa3.51□□□□□ -1.85
CDC9YDL164C CSN9Q03981 162 aa3.51□□□□□ -1.85
CDC9YDL164C DTD1Q07648 150 aaKnown RBP3.51□□□□□ -1.85
CDC9YDL164C ERV2Q12284 196 aa3.51□□□□□ -1.85
CDC9YDL164C TIM22Q12328 207 aa3.51□□□□□ -1.85
CDC9YDL164C YER078W-AQ3E7A2 54 aa3.51□□□□□ -1.85
CDC9YDL164C YOR093CQ12275 1648 aa3.51□□□□□ -1.85
CDC9YDL164C KRE5P22023 1365 aa3.51□□□□□ -1.85
CDC9YDL164C URA10P30402 227 aa3.51□□□□□ -1.85
CDC9YDL164C VMA22P38784 181 aa3.51□□□□□ -1.85
CDC9YDL164C SNO3P43544 222 aa3.51□□□□□ -1.85
CDC9YDL164C ORM1P53224 222 aa3.51□□□□□ -1.85
CDC9YDL164C YPD1Q07688 167 aa3.51□□□□□ -1.85
CDC9YDL164C TFC7Q12415 435 aa3.51□□□□□ -1.85
CDC9YDL164C UGX2P32772 223 aa3.5□□□□□ -1.85
CDC9YDL164C YBL081WP38180 368 aaKnown RBP3.5□□□□□ -1.85
CDC9YDL164C PGU1P47180 361 aa3.5□□□□□ -1.85
CDC9YDL164C YDR415CQ04033 374 aaPredicted RBP3.5□□□□□ -1.85
CDC9YDL164C GPI17Q04080 534 aa3.5□□□□□ -1.85
CDC9YDL164C MRX8Q05473 314 aa3.5□□□□□ -1.85
CDC9YDL164C YOR342CQ12182 319 aa3.5□□□□□ -1.85
CDC9YDL164C PEX11Q12462 236 aa3.5□□□□□ -1.85
CDC9YDL164C LYS2P07702 1392 aa3.5□□□□□ -1.85
CDC9YDL164C TY1B-JR2P47100 1755 aaKnown RBP3.5□□□□□ -1.85
CDC9YDL164C TY1B-ER2Q03619 1755 aa3.5□□□□□ -1.85
CDC9YDL164C TY1B-MR1Q04214 1755 aa3.5□□□□□ -1.85
CDC9YDL164C TY1B-MR2Q04670 1755 aaKnown RBP3.5□□□□□ -1.85
CDC9YDL164C TY1B-LR1Q12088 1755 aaKnown RBP3.5□□□□□ -1.85
CDC9YDL164C TY1B-NL1Q12112 1755 aa3.5□□□□□ -1.85
CDC9YDL164C TY1B-GR1Q12141 1755 aa3.5□□□□□ -1.85
CDC9YDL164C TY1B-BLQ12490 1755 aa3.5□□□□□ -1.85
CDC9YDL164C MRPS28P21771 286 aa3.5□□□□□ -1.85
CDC9YDL164C PTM1P32857 523 aa3.5□□□□□ -1.85
CDC9YDL164C EDC2P40023 145 aaPredicted RBP3.5□□□□□ -1.85
CDC9YDL164C CAT5P41735 233 aa3.5□□□□□ -1.85
CDC9YDL164C INM2Q05533 292 aa3.5□□□□□ -1.85
CDC9YDL164C YLR030WQ07967 263 aa3.5□□□□□ -1.85
CDC9YDL164C MHT1Q12525 324 aa3.5□□□□□ -1.85
CDC9YDL164C MDS3P53094 1487 aa3.49□□□□□ -1.85
CDC9YDL164C RPL2AP0CX45 254 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C RPL2BP0CX46 254 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C YKL102CP34249 101 aa3.49□□□□□ -1.85
CDC9YDL164C YGP1P38616 354 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C SCS3P53012 380 aa3.49□□□□□ -1.85
CDC9YDL164C YNL010WP53981 241 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C YDR476CQ03362 224 aa3.49□□□□□ -1.85
CDC9YDL164C FSH2Q05015 223 aa3.49□□□□□ -1.85
CDC9YDL164C NEJ1Q06148 342 aa3.49□□□□□ -1.85
CDC9YDL164C NKP2Q06162 153 aa3.49□□□□□ -1.85
CDC9YDL164C BBP1Q12365 385 aa3.49□□□□□ -1.85
CDC9YDL164C ATG5Q12380 294 aa3.49□□□□□ -1.85
CDC9YDL164C IML1P47170 1584 aa3.49□□□□□ -1.85
CDC9YDL164C DUR1,2P32528 1835 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C TY1B-BRQ12193 1756 aa3.49□□□□□ -1.85
CDC9YDL164C TY1B-GR3Q12316 1755 aa3.49□□□□□ -1.85
CDC9YDL164C TY1B-ORQ92393 1755 aa3.49□□□□□ -1.85
CDC9YDL164C FCY2P17064 533 aa3.49□□□□□ -1.85
CDC9YDL164C SCO1P23833 295 aa3.49□□□□□ -1.85
CDC9YDL164C CPR4P25334 318 aa3.49□□□□□ -1.85
CDC9YDL164C LSM12P38828 187 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C SPL2P38839 148 aa3.49□□□□□ -1.85
CDC9YDL164C BAT1P38891 393 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C GLE2P40066 365 aa3.49□□□□□ -1.85
CDC9YDL164C CIN5P40917 295 aa3.49□□□□□ -1.85
CDC9YDL164C CWC25P53854 179 aaKnown RBP3.49□□□□□ -1.85
CDC9YDL164C YPL039WQ03080 316 aa3.49□□□□□ -1.85
CDC9YDL164C SHH4Q06236 168 aa3.49□□□□□ -1.85
CDC9YDL164C HRD1Q08109 551 aa3.49□□□□□ -1.85
CDC9YDL164C SPO14P36126 1683 aa3.49□□□□□ -1.85
CDC9YDL164C YMR316C-AI2HB70 103 aa3.48□□□□□ -1.85
CDC9YDL164C CPR1P14832 162 aaKnown RBP3.48□□□□□ -1.85
CDC9YDL164C MRPL39P36533 70 aa3.48□□□□□ -1.85
CDC9YDL164C YER186CP40101 306 aa3.48□□□□□ -1.85
CDC9YDL164C HAC1P41546 238 aa3.48□□□□□ -1.85
CDC9YDL164C VHS1Q03785 461 aa3.48□□□□□ -1.85
CDC9YDL164C YFR032C-BQ8TGU2 87 aa3.48□□□□□ -1.85
CDC9YDL164C YSP2Q06681 1438 aa3.48□□□□□ -1.85
CDC9YDL164C RPO41P13433 1351 aaKnown RBP3.48□□□□□ -1.85
CDC9YDL164C UTP30P36144 274 aaKnown RBP3.47□□□□□ -1.85
CDC9YDL164C COG7P53195 279 aa3.47□□□□□ -1.85
CDC9YDL164C RPB5P20434 215 aa3.47□□□□□ -1.85
CDC9YDL164C CPR5P35176 225 aa3.47□□□□□ -1.85
CDC9YDL164C TVP38P36164 337 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms