RNA–Protein interactions for RNA: YCR030C

SYP1, Transcript of Negative regulator of WASP-Arp23 complex, yeast

Gene SYP1, Length 2,613 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYP1	YCR030C	AAH1	P53909	347 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	RVB1	Q03940	463 aa	Known RBP	4.11	□□□□□ -1.75
SYP1	YCR030C	EAF3	Q12432	401 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	URA6	P15700	204 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	CKS1	P20486	150 aa	Known RBP	4.11	□□□□□ -1.75
SYP1	YCR030C	RPS2	P25443	254 aa	Known RBP	4.11	□□□□□ -1.75
SYP1	YCR030C	EHD3	P28817	500 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	ECO1	P43605	281 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	YJR011C	P47086	261 aa	Predicted RBP	4.11	□□□□□ -1.75
SYP1	YCR030C	YLR152C	P54072	576 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	MRPL51	Q06090	140 aa	Predicted RBP	4.11	□□□□□ -1.75
SYP1	YCR030C	MCT1	Q12283	360 aa		4.11	□□□□□ -1.75
SYP1	YCR030C	APA2	P22108	325 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	MAG1	P22134	296 aa	Known RBP	4.1	□□□□□ -1.75
SYP1	YCR030C	MRP17	P28778	131 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	AGA2	P32781	87 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	MIA40	P36046	403 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	ERJ5	P43613	295 aa	Predicted RBP	4.1	□□□□□ -1.75
SYP1	YCR030C	LOH1	P47055	219 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	TAD2	P47058	250 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	GIM3	P53900	129 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	APM1	Q00776	475 aa	Predicted RBP	4.1	□□□□□ -1.75
SYP1	YCR030C	YML018C	Q03730	393 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	COX2	P00410	251 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	COX9	P07255	59 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	RPL18A	P0CX49	186 aa	Known RBP	4.1	□□□□□ -1.75
SYP1	YCR030C	RPL18B	P0CX50	186 aa	Known RBP	4.1	□□□□□ -1.75
SYP1	YCR030C	RPL12A	P0CX53	165 aa	Known RBP	4.1	□□□□□ -1.75
SYP1	YCR030C	RPL12B	P0CX54	165 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	UTR1	P21373	530 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	COQ2	P32378	372 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	MRPL3	P36516	390 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	IKS1	P47042	667 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	YPL039W	Q03080	316 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	RTR2	Q12378	196 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	SET6	Q12529	373 aa		4.1	□□□□□ -1.75
SYP1	YCR030C	IPP1	P00817	287 aa	Known RBP	4.09	□□□□□ -1.75
SYP1	YCR030C	CAM1	P29547	415 aa	Known RBP	4.09	□□□□□ -1.75
SYP1	YCR030C	VMA5	P31412	392 aa	Known RBP	4.09	□□□□□ -1.75
SYP1	YCR030C	YKL063C	P35725	167 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	POP8	P38208	133 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	SYS1	P41544	203 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	COQ11	Q05892	277 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SYP1	YCR030C	MES1	P00958	751 aa	Known RBP	4.09	□□□□□ -1.75
SYP1	YCR030C	GDH1	P07262	454 aa	Known RBP	4.09	□□□□□ -1.75
SYP1	YCR030C	MRS4	P23500	304 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	YJL118W	P47022	219 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	ALG9	P53868	555 aa	Known RBP	4.09	□□□□□ -1.75
SYP1	YCR030C	NRK1	P53915	240 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	RRT7	Q07829	113 aa		4.09	□□□□□ -1.75
SYP1	YCR030C	SCO1	P23833	295 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	TOA2	P32774	122 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	YKL162C	P36052	402 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	YND1	P40009	630 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	YIR035C	P40579	254 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	SMX3	P54999	86 aa	Predicted RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	YPL077C	Q02831	240 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	TSA2	Q04120	196 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	HNT1	Q04344	158 aa	Known RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	TMA10	Q06177	86 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	TPI1	P00942	248 aa	Known RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	MATALPHA1	P0CY06	175 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	HMLALPHA1	P0CY07	175 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	NHP6B	P11633	99 aa	Known RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	MSI1	P13712	422 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	ARC40	P38328	384 aa	Known RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	MRPS16	Q02608	121 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	YDR209C	Q03480	137 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	YDR248C	Q03786	193 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	MED4	Q12343	284 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	FSH3	Q99369	266 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	YCR016W	P25617	290 aa	Known RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	AVT4	P50944	713 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	UFD1	P53044	361 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	CWC25	P53854	179 aa	Known RBP	4.08	□□□□□ -1.76
SYP1	YCR030C	SAM50	P53969	484 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	MCH4	Q08268	501 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	HUT1	Q12520	339 aa		4.08	□□□□□ -1.76
SYP1	YCR030C	SEN2	P16658	377 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	DEG1	P31115	442 aa	Known RBP	4.07	□□□□□ -1.76
SYP1	YCR030C	MTC6	P38849	526 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	SMB1	P40018	196 aa	Known RBP	4.07	□□□□□ -1.76
SYP1	YCR030C	FLX1	P40464	311 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	SLM1	P40485	686 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	AVT7	P40501	490 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	MTM1	P53320	366 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	SCW4	P53334	386 aa	Known RBP	4.07	□□□□□ -1.76
SYP1	YCR030C	PRM15	Q03262	622 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	HAM1	P47119	197 aa	Known RBP	4.07	□□□□□ -1.76
SYP1	YCR030C	YGL159W	P53110	370 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	SRL2	Q12020	392 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	PRM4	Q12498	284 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	Q0144	Q9ZZW2	109 aa		4.07	□□□□□ -1.76
SYP1	YCR030C	QCR7	P00128	127 aa		4.06	□□□□□ -1.76
SYP1	YCR030C	RPL30	P14120	105 aa	Known RBP	4.06	□□□□□ -1.76
SYP1	YCR030C	FUS3	P16892	353 aa	Known RBP	4.06	□□□□□ -1.76
SYP1	YCR030C	MSK1	P32048	576 aa		4.06	□□□□□ -1.76
SYP1	YCR030C	AIM3	P38266	947 aa	Known RBP	4.06	□□□□□ -1.76
SYP1	YCR030C	YER079W	P40052	210 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms