RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W SLX9P53251 210 aaPredicted RBP4.29□□□□□ -1.72
CDC28YBR160W HCH1P53834 153 aa4.29□□□□□ -1.72
CDC28YBR160W YMR082CQ04276 118 aa4.29□□□□□ -1.72
CDC28YBR160W GMC1Q04399 608 aa4.29□□□□□ -1.72
CDC28YBR160W SEN15Q04675 128 aa4.29□□□□□ -1.72
CDC28YBR160W ARR3Q06598 404 aa4.29□□□□□ -1.72
CDC28YBR160W BSC6Q08280 497 aa4.29□□□□□ -1.72
CDC28YBR160W IZH2Q12442 317 aa4.29□□□□□ -1.72
CDC28YBR160W YDR157WA0A023PZE8 133 aa4.28□□□□□ -1.72
CDC28YBR160W RPL20AP0CX23 172 aaKnown RBP4.28□□□□□ -1.72
CDC28YBR160W RPL20BP0CX24 172 aaPredicted RBP4.28□□□□□ -1.72
CDC28YBR160W ELF1P36053 145 aa4.28□□□□□ -1.72
CDC28YBR160W NOP16P40007 231 aaKnown RBP4.28□□□□□ -1.72
CDC28YBR160W SMD3P43321 101 aaKnown RBP4.28□□□□□ -1.72
CDC28YBR160W SEH1P53011 349 aaKnown RBP4.28□□□□□ -1.72
CDC28YBR160W YGR151CP53287 111 aa4.28□□□□□ -1.72
CDC28YBR160W ALG9P53868 555 aaKnown RBP4.28□□□□□ -1.72
CDC28YBR160W TDA7P53882 636 aaPredicted RBP4.28□□□□□ -1.72
CDC28YBR160W SAM50P53969 484 aa4.28□□□□□ -1.72
CDC28YBR160W VPS28Q02767 242 aa4.28□□□□□ -1.72
CDC28YBR160W NCE101Q02820 53 aa4.28□□□□□ -1.72
CDC28YBR160W MCP1Q12106 302 aa4.28□□□□□ -1.72
CDC28YBR160W FYV7Q12247 151 aa4.28□□□□□ -1.72
CDC28YBR160W YOP1Q12402 180 aa4.28□□□□□ -1.72
CDC28YBR160W YNR034W-AQ3E841 98 aa4.28□□□□□ -1.72
CDC28YBR160W UBA3Q99344 299 aa4.28□□□□□ -1.72
CDC28YBR160W ATP5P09457 212 aa4.27□□□□□ -1.73
CDC28YBR160W NHP6AP11632 93 aaKnown RBP4.27□□□□□ -1.73
CDC28YBR160W LSB5P25369 354 aa4.27□□□□□ -1.73
CDC28YBR160W STP22P25604 385 aa4.27□□□□□ -1.73
CDC28YBR160W YCR101CP25607 182 aa4.27□□□□□ -1.73
CDC28YBR160W FMP46P36141 133 aaKnown RBP4.27□□□□□ -1.73
CDC28YBR160W HSP10P38910 106 aa4.27□□□□□ -1.73
CDC28YBR160W YAL037WP39728 267 aa4.27□□□□□ -1.73
CDC28YBR160W PAU5P43575 122 aa4.27□□□□□ -1.73
CDC28YBR160W GWT1P47026 490 aa4.27□□□□□ -1.73
CDC28YBR160W ERG25P53045 309 aa4.27□□□□□ -1.73
CDC28YBR160W SMM1P53720 384 aaKnown RBP4.27□□□□□ -1.73
CDC28YBR160W PET191Q02772 108 aa4.27□□□□□ -1.73
CDC28YBR160W PIN3Q06449 215 aa4.27□□□□□ -1.73
CDC28YBR160W IZH3Q07959 543 aa4.27□□□□□ -1.73
CDC28YBR160W SRO7Q12038 1033 aa4.27□□□□□ -1.73
CDC28YBR160W YOR015WQ12169 119 aa4.27□□□□□ -1.73
CDC28YBR160W ERG27Q12452 347 aaKnown RBP4.27□□□□□ -1.73
CDC28YBR160W RAX2Q12465 1220 aa4.27□□□□□ -1.73
CDC28YBR160W YCL001W-BQ96VH2 84 aa4.27□□□□□ -1.73
CDC28YBR160W CDC28P00546 298 aaKnown RBP4.26□□□□□ -1.73
CDC28YBR160W SGA1P08019 549 aa4.26□□□□□ -1.73
CDC28YBR160W RPL31AP0C2H8 113 aaKnown RBP4.26□□□□□ -1.73
CDC28YBR160W RPL31BP0C2H9 113 aaKnown RBP4.26□□□□□ -1.73
CDC28YBR160W CKA1P15790 372 aa4.26□□□□□ -1.73
CDC28YBR160W STE18P18852 110 aa4.26□□□□□ -1.73
CDC28YBR160W RPB8P20436 146 aa4.26□□□□□ -1.73
CDC28YBR160W SEC62P21825 274 aa4.26□□□□□ -1.73
CDC28YBR160W VMA16P23968 213 aa4.26□□□□□ -1.73
CDC28YBR160W MEK1P24719 497 aaPredicted RBP4.26□□□□□ -1.73
CDC28YBR160W ACP1P32463 125 aa4.26□□□□□ -1.73
CDC28YBR160W AGA2P32781 87 aa4.26□□□□□ -1.73
CDC28YBR160W ALK2P32789 676 aaPredicted RBP4.26□□□□□ -1.73
CDC28YBR160W FRM2P37261 193 aa4.26□□□□□ -1.73
CDC28YBR160W YBR096WP38256 230 aa4.26□□□□□ -1.73
CDC28YBR160W MNL1P38888 796 aa4.26□□□□□ -1.73
CDC28YBR160W NAS2P40555 220 aa4.26□□□□□ -1.73
CDC28YBR160W OST3P48439 350 aa4.26□□□□□ -1.73
CDC28YBR160W PAU4P53427 120 aa4.26□□□□□ -1.73
CDC28YBR160W AQR1P53943 586 aa4.26□□□□□ -1.73
CDC28YBR160W ERG13P54839 491 aaKnown RBP4.26□□□□□ -1.73
CDC28YBR160W FSH2Q05015 223 aa4.26□□□□□ -1.73
CDC28YBR160W RKI1Q12189 258 aa4.26□□□□□ -1.73
CDC28YBR160W HMS1Q12398 434 aa4.26□□□□□ -1.73
CDC28YBR160W YDL085C-AQ3E7B7 68 aaKnown RBP4.26□□□□□ -1.73
CDC28YBR160W YIL134C-AQ45U18 67 aa4.26□□□□□ -1.73
CDC28YBR160W CCH1P50077 2039 aa4.26□□□□□ -1.73
CDC28YBR160W SCEIP03882 235 aa4.25□□□□□ -1.73
CDC28YBR160W ILV5P06168 395 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W GDH1P07262 454 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W SPS4P09937 338 aa4.25□□□□□ -1.73
CDC28YBR160W PAU1P0CE88 120 aa4.25□□□□□ -1.73
CDC28YBR160W PAU14P0CE89 120 aa4.25□□□□□ -1.73
CDC28YBR160W PAU6P0CE90 120 aa4.25□□□□□ -1.73
CDC28YBR160W PAU18P0CE91 120 aa4.25□□□□□ -1.73
CDC28YBR160W PAU8P0CE92 120 aa4.25□□□□□ -1.73
CDC28YBR160W PAU11P0CE93 120 aa4.25□□□□□ -1.73
CDC28YBR160W RPL1AP0CX43 217 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W RPL1BP0CX44 217 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W OLE1P21147 510 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W CPR2P23285 205 aa4.25□□□□□ -1.73
CDC28YBR160W PPA2P28239 310 aa4.25□□□□□ -1.73
CDC28YBR160W SEF1P34228 1148 aa4.25□□□□□ -1.73
CDC28YBR160W MIA40P36046 403 aa4.25□□□□□ -1.73
CDC28YBR160W PAU13P38725 120 aa4.25□□□□□ -1.73
CDC28YBR160W POP2P39008 433 aa4.25□□□□□ -1.73
CDC28YBR160W IRC22P40006 225 aa4.25□□□□□ -1.73
CDC28YBR160W NSA2P40078 261 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W FMP10P40098 244 aa4.25□□□□□ -1.73
CDC28YBR160W NSA1P53136 463 aaPredicted RBP4.25□□□□□ -1.73
CDC28YBR160W RHO5P53879 331 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W RNH201P53942 307 aa4.25□□□□□ -1.73
CDC28YBR160W YVH1Q02256 364 aaKnown RBP4.25□□□□□ -1.73
CDC28YBR160W PAU10Q03050 120 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms