RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W AME1P38313 324 aa3.46□□□□□ -1.86
CKS1YBR135W YIL059CP40520 121 aa3.46□□□□□ -1.86
CKS1YBR135W AGE2P40529 298 aa3.46□□□□□ -1.86
CKS1YBR135W RPE1P46969 238 aa3.46□□□□□ -1.86
CKS1YBR135W LSM1P47017 172 aaKnown RBP3.46□□□□□ -1.86
CKS1YBR135W CWC23P52868 283 aaPredicted RBP3.46□□□□□ -1.86
CKS1YBR135W DXO1Q06349 442 aa3.46□□□□□ -1.86
CKS1YBR135W CSM4Q08955 156 aa3.46□□□□□ -1.86
CKS1YBR135W SNF8Q12483 233 aa3.46□□□□□ -1.86
CKS1YBR135W YKL183C-AQ3E765 70 aa3.46□□□□□ -1.86
CKS1YBR135W RPL40AP0CH08 128 aaKnown RBP3.45□□□□□ -1.86
CKS1YBR135W RPL40BP0CH09 128 aaKnown RBP3.45□□□□□ -1.86
CKS1YBR135W PHO13P19881 312 aa3.45□□□□□ -1.86
CKS1YBR135W IDH1P28834 360 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
CKS1YBR135W HOM6P31116 359 aaKnown RBP3.45□□□□□ -1.86
CKS1YBR135W TAF14P35189 244 aa3.45□□□□□ -1.86
CKS1YBR135W FIG1P38224 298 aa3.45□□□□□ -1.86
CKS1YBR135W TRM7P38238 310 aaKnown RBP3.45□□□□□ -1.86
CKS1YBR135W ARN2P38724 620 aa3.45□□□□□ -1.86
CKS1YBR135W THO1P40040 218 aaKnown RBP3.45□□□□□ -1.86
CKS1YBR135W YER189WP40104 122 aa3.45□□□□□ -1.86
CKS1YBR135W POG1P40473 351 aa3.45□□□□□ -1.86
CKS1YBR135W PFS2P42841 465 aaKnown RBP3.45□□□□□ -1.86
CKS1YBR135W YIP3P53633 176 aa3.45□□□□□ -1.86
CKS1YBR135W PEX12Q04370 399 aa3.45□□□□□ -1.86
CKS1YBR135W PRR2Q12310 699 aa3.45□□□□□ -1.86
CKS1YBR135W YPL119C-AQ3E751 87 aa3.45□□□□□ -1.86
CKS1YBR135W YCL012CQ8J0M4 134 aa3.45□□□□□ -1.86
CKS1YBR135W IRA2P19158 3079 aa3.44□□□□□ -1.86
CKS1YBR135W QCR2P07257 368 aa3.44□□□□□ -1.86
CKS1YBR135W EHD3P28817 500 aa3.44□□□□□ -1.86
CKS1YBR135W MEI4P29467 408 aa3.44□□□□□ -1.86
CKS1YBR135W VPS21P36017 210 aaKnown RBP3.44□□□□□ -1.86
CKS1YBR135W TRM5P38793 499 aa3.44□□□□□ -1.86
CKS1YBR135W EDC3P39998 551 aaKnown RBP3.44□□□□□ -1.86
CKS1YBR135W GIM4P40005 111 aaKnown RBP3.44□□□□□ -1.86
CKS1YBR135W YER121WP40076 114 aa3.44□□□□□ -1.86
CKS1YBR135W RSM27P53305 110 aa3.44□□□□□ -1.86
CKS1YBR135W CTF19Q02732 369 aa3.44□□□□□ -1.86
CKS1YBR135W YPL039WQ03080 316 aa3.44□□□□□ -1.86
CKS1YBR135W PEX10Q05568 337 aa3.44□□□□□ -1.86
CKS1YBR135W GRX8Q05926 109 aa3.44□□□□□ -1.86
CKS1YBR135W YPR063CQ12160 140 aa3.44□□□□□ -1.86
CKS1YBR135W YDR157WA0A023PZE8 133 aa3.43□□□□□ -1.86
CKS1YBR135W FMT1P32785 401 aa3.43□□□□□ -1.86
CKS1YBR135W SRX1P36077 127 aa3.43□□□□□ -1.86
CKS1YBR135W ECM14P38836 430 aa3.43□□□□□ -1.86
CKS1YBR135W SRP14P38985 146 aa3.43□□□□□ -1.86
CKS1YBR135W SOK1P40317 901 aa3.43□□□□□ -1.86
CKS1YBR135W ICE2P40499 491 aa3.43□□□□□ -1.86
CKS1YBR135W ECO1P43605 281 aa3.43□□□□□ -1.86
CKS1YBR135W OST3P48439 350 aa3.43□□□□□ -1.86
CKS1YBR135W ASI3P53983 676 aa3.43□□□□□ -1.86
CKS1YBR135W PLB3Q08108 686 aa3.43□□□□□ -1.86
CKS1YBR135W EFG1Q3E705 233 aaKnown RBP3.43□□□□□ -1.86
CKS1YBR135W TEL1P38110 2787 aa3.43□□□□□ -1.86
CKS1YBR135W RPS23AP0CX29 145 aaKnown RBP3.42□□□□□ -1.86
CKS1YBR135W RPS23BP0CX30 145 aa3.42□□□□□ -1.86
CKS1YBR135W RFA3P26755 122 aaKnown RBP3.42□□□□□ -1.86
CKS1YBR135W SSO1P32867 290 aa3.42□□□□□ -1.86
CKS1YBR135W NUF2P33895 451 aa3.42□□□□□ -1.86
CKS1YBR135W JEN1P36035 616 aa3.42□□□□□ -1.86
CKS1YBR135W SRP102P36057 244 aaPredicted RBP3.42□□□□□ -1.86
CKS1YBR135W FZO1P38297 855 aa3.42□□□□□ -1.86
CKS1YBR135W YEL028WP39989 153 aa3.42□□□□□ -1.86
CKS1YBR135W COX15P40086 486 aa3.42□□□□□ -1.86
CKS1YBR135W YKE4P40544 346 aa3.42□□□□□ -1.86
CKS1YBR135W HOC1P47124 396 aa3.42□□□□□ -1.86
CKS1YBR135W YJR149WP47177 404 aa3.42□□□□□ -1.86
CKS1YBR135W AAH1P53909 347 aa3.42□□□□□ -1.86
CKS1YBR135W YMR166CQ03829 368 aa3.42□□□□□ -1.86
CKS1YBR135W YPR195CQ06594 109 aa3.42□□□□□ -1.86
CKS1YBR135W RFM1Q12192 310 aa3.42□□□□□ -1.86
CKS1YBR135W YLR046CQ12253 270 aa3.42□□□□□ -1.86
CKS1YBR135W SNU23Q12368 194 aaPredicted RBP3.42□□□□□ -1.86
CKS1YBR135W YBL112CQ3E7Y4 105 aa3.42□□□□□ -1.86
CKS1YBR135W ZWF1P11412 505 aaKnown RBP3.41□□□□□ -1.86
CKS1YBR135W YBR096WP38256 230 aa3.41□□□□□ -1.86
CKS1YBR135W AIM18P38884 321 aa3.41□□□□□ -1.86
CKS1YBR135W USE1P53146 245 aa3.41□□□□□ -1.86
CKS1YBR135W YNL140CP53910 189 aa3.41□□□□□ -1.86
CKS1YBR135W PIR1Q03178 341 aa3.41□□□□□ -1.86
CKS1YBR135W YPR114WQ06107 315 aa3.41□□□□□ -1.86
CKS1YBR135W DAS2Q12084 232 aa3.41□□□□□ -1.86
CKS1YBR135W PEX11Q12462 236 aa3.41□□□□□ -1.86
CKS1YBR135W VMA22P38784 181 aa3.4□□□□□ -1.87
CKS1YBR135W IKI1P38874 309 aa3.4□□□□□ -1.87
CKS1YBR135W TIF34P40217 347 aaKnown RBP3.4□□□□□ -1.87
CKS1YBR135W JHD2P47156 728 aaPredicted RBP3.4□□□□□ -1.87
CKS1YBR135W NIF3P53081 288 aa3.4□□□□□ -1.87
CKS1YBR135W ALG9P53868 555 aaKnown RBP3.4□□□□□ -1.87
CKS1YBR135W YDC1Q02896 317 aa3.4□□□□□ -1.87
CKS1YBR135W LDB18Q07887 179 aa3.4□□□□□ -1.87
CKS1YBR135W COQ10Q08058 207 aa3.4□□□□□ -1.87
CKS1YBR135W PRM7Q12459 698 aa3.4□□□□□ -1.87
CKS1YBR135W LSO2Q3E772 92 aaKnown RBP3.4□□□□□ -1.87
CKS1YBR135W NUM1Q00402 2748 aa3.4□□□□□ -1.87
CKS1YBR135W YLR462WO13556 202 aa3.39□□□□□ -1.87
CKS1YBR135W BUD13P46947 266 aaPredicted RBP3.39□□□□□ -1.87
CKS1YBR135W EMC4P53073 190 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms