RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ZNF528Q3MIS6 628 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 FAM78AQ5JUQ0 283 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 CYP4A22Q5TCH4 519 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 TPGS2Q68CL5 300 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 IQCEQ6IPM2 695 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 ZNF280DQ6N043 979 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 ZNF852Q6ZMS4 543 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 APPL2Q8NEU8 664 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 ATRIPQ8WXE1 791 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 SUSD3Q96L08 255 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 ZNF512Q96ME7 567 aaPredicted RBP20.72■□□□□ 0.91
SMN2-215ENST00000628696 PLIN2Q99541 437 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 BRD9Q9H8M2 597 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 ZFP14Q9HCL3 533 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 DCHS1Q96JQ0 3298 aa20.72■□□□□ 0.91
SMN2-215ENST00000628696 MEFVO15553 781 aaPredicted RBP20.71■□□□□ 0.91
SMN2-215ENST00000628696 TOM1L1O75674 476 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 PRPHP41219 470 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 SMTNP53814 917 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 NOLC1Q14978 699 aaKnown RBP eCLIP20.71■□□□□ 0.91
SMN2-215ENST00000628696 SLC10A6Q3KNW5 377 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 MCTP1Q6DN14 999 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 HS6ST3Q8IZP7 471 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 SUMF1Q8NBK3 374 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 DDX12PQ92771 950 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 TIPINQ9BVW5 301 aa20.71■□□□□ 0.91
SMN2-215ENST00000628696 MRPS17Q9Y2R5 130 aaKnown RBP20.71■□□□□ 0.91
SMN2-215ENST00000628696 MYL4P12829 197 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 PLS3P13797 630 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 CPB1P15086 417 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 GUCY2CP25092 1073 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 CCR2P41597 374 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 SPAG1Q07617 926 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 TWF1Q12792 350 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 TSSK4Q6SA08 328 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 DGLUCYQ7Z3D6 616 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 TMEM130Q8N3G9 435 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 CLDN23Q96B33 292 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 NTPCRQ9BSD7 190 aaKnown RBP20.7■□□□□ 0.9
SMN2-215ENST00000628696 TRMT61BQ9BVS5 477 aaKnown RBP20.7■□□□□ 0.9
SMN2-215ENST00000628696 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.7■□□□□ 0.9
SMN2-215ENST00000628696 NCDNQ9UBB6 729 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 TUBGCP4Q9UGJ1 667 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 AFF4Q9UHB7 1163 aaKnown RBP20.7■□□□□ 0.9
SMN2-215ENST00000628696 KCNG1Q9UIX4 513 aa20.7■□□□□ 0.9
SMN2-215ENST00000628696 NDRG2Q9UN36 371 aaKnown RBP20.7■□□□□ 0.9
SMN2-215ENST00000628696 F5P12259 2224 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 CLDN3O15551 220 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 FCARP24071 287 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 TMEM161BQ8NDZ6 487 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 SPIRE2Q8WWL2 714 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 DNASE1L2Q92874 299 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 BICD1Q96G01 975 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 ZSWIM3Q96MP5 696 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 PNMA5Q96PV4 448 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 CEP72Q9P209 647 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 PCDHB8Q9UN66 801 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 PCDHGA2Q9Y5H1 932 aa20.69■□□□□ 0.9
SMN2-215ENST00000628696 NRG2O14511 850 aaPredicted RBP20.68■□□□□ 0.9
SMN2-215ENST00000628696 SPTLC1O15269 473 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 MICAL2O94851 1124 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 CXCL8P10145 99 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 MAPTP10636 758 aaKnown RBP20.68■□□□□ 0.9
SMN2-215ENST00000628696 GJA1P17302 382 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 GDI1P31150 447 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 RPS9P46781 194 aaKnown RBP20.68■□□□□ 0.9
SMN2-215ENST00000628696 ZPBP2Q6X784 338 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 RNF19BQ6ZMZ0 732 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 SYT2Q8N9I0 419 aaPredicted RBP20.68■□□□□ 0.9
SMN2-215ENST00000628696 BORCS6Q96GS4 357 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 CDK5RAP3Q96JB5 506 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 ASB16Q96NS5 453 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 ZSCAN32Q9NX65 697 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 TIMM13Q9Y5L4 95 aaPredicted RBP20.68■□□□□ 0.9
SMN2-215ENST00000628696 GPR179Q6PRD1 2367 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 TICRRQ7Z2Z1 1910 aa20.68■□□□□ 0.9
SMN2-215ENST00000628696 NPHP3-ACAD11A0A0J9YXS1 232 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 MAN2B1O00754 1011 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 PLA2G4BP0C869 781 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 VIPR2P41587 438 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 CACNB1Q02641 598 aaPredicted RBP20.67■□□□□ 0.9
SMN2-215ENST00000628696 PUM1Q14671 1186 aaKnown RBP eCLIP20.67■□□□□ 0.9
SMN2-215ENST00000628696 ERICH6BQ5W0A0 696 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 SMARCD2Q92925 531 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 IRF7Q92985 503 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 KIF12Q96FN5 646 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 KIF2CQ99661 725 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 ASAH2Q9NR71 780 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 MAFFQ9ULX9 164 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 KIF3AQ9Y496 699 aa20.67■□□□□ 0.9
SMN2-215ENST00000628696 CEP250Q9BV73 2442 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 VWA3AA6NCI4 1184 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 SHISA7A6NL88 538 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 MOSPD3O75425 235 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 CLTAP09496 248 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 OR4Q2P0C623 313 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 PSMC3P17980 439 aa20.66■□□□□ 0.9
SMN2-215ENST00000628696 ATP2C1P98194 919 aaPredicted RBP20.66■□□□□ 0.9
SMN2-215ENST00000628696 YWHAHQ04917 246 aaPredicted RBP20.66■□□□□ 0.9
SMN2-215ENST00000628696 MCL1Q07820 350 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms