RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 RBP5P82980 135 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 ZNF667Q5HYK9 610 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 HABP4Q5JVS0 413 aaKnown RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 SPOPLQ6IQ16 392 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 GDF6Q6KF10 455 aaPredicted RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 TRIM72Q6ZMU5 477 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 NOP9Q86U38 636 aaKnown RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 SLC47A2Q86VL8 602 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 TMEM192Q8IY95 271 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 TTC39CQ8N584 583 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 PPP1R13LQ8WUF5 828 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 SLC20A1Q8WUM9 679 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 UBE2Q2Q8WVN8 375 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 PACSIN1Q9BY11 444 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 ISCUQ9H1K1 167 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 HMX1Q9NP08 348 aaPredicted RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 PIN4Q9Y237 131 aaKnown RBP14.77□□□□□ -0.05
TPM1-215ENST00000558868 SAR1BQ9Y6B6 198 aa14.77□□□□□ -0.05
TPM1-215ENST00000558868 NCANO14594 1321 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 XPOTO43592 962 aaKnown RBP14.76□□□□□ -0.05
TPM1-215ENST00000558868 STAU1O95793 577 aaKnown RBP14.76□□□□□ -0.05
TPM1-215ENST00000558868 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
TPM1-215ENST00000558868 KRT19P08727 400 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 PRLRP16471 622 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 CHRNB2P17787 502 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 NOP2P46087 812 aaKnown RBP14.76□□□□□ -0.05
TPM1-215ENST00000558868 RHOT2Q8IXI1 618 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 HACE1Q8IYU2 909 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 SYCE1Q8N0S2 351 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 C1orf127Q8N9H9 656 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 RBBP8NLQ8NC74 664 aaPredicted RBP14.76□□□□□ -0.05
TPM1-215ENST00000558868 ARRDC4Q8NCT1 418 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 BEST2Q8NFU1 509 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 OLIG1Q8TAK6 271 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 ZNF296Q8WUU4 475 aaPredicted RBP14.76□□□□□ -0.05
TPM1-215ENST00000558868 KIF12Q96FN5 646 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 FAM84AQ96KN4 292 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 SNX27Q96L92 541 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 PDCL3Q9H2J4 239 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 VRTNQ9H8Y1 702 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 CYP3A43Q9HB55 503 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 PCDHGC5Q9Y5F6 944 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 CDY2AQ9Y6F7 541 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 ANK1P16157 1881 aa14.76□□□□□ -0.05
TPM1-215ENST00000558868 TRIP12Q14669 1992 aaPredicted RBP14.75□□□□□ -0.05
TPM1-215ENST00000558868 BUB1O43683 1085 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 CAND2O75155 1236 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
TPM1-215ENST00000558868 INHAP05111 366 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 MMEP08473 750 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 GRK4P32298 578 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 ACLYP53396 1101 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 GPC5P78333 572 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 AMPD2Q01433 879 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 FMO1Q01740 532 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 PTK7Q13308 1070 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 ITGA7Q13683 1181 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 TCEAL1Q15170 157 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 PTGISQ16647 500 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 TAF3Q5VWG9 929 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 TMEM270Q6UE05 265 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 UBR7Q8N806 425 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 RFFLQ8WZ73 363 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 DDX1Q92499 740 aaKnown RBP14.75□□□□□ -0.05
TPM1-215ENST00000558868 TRIM11Q96F44 468 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 GLT1D1Q96MS3 346 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 ARID3AQ99856 593 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 SEZ6LQ9BYH1 1024 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 XYLT2Q9H1B5 865 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 DPP3Q9NY33 737 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 SNTG2Q9NY99 539 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 NOD1Q9Y239 953 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.75□□□□□ -0.05
TPM1-215ENST00000558868 CAPN6Q9Y6Q1 641 aa14.75□□□□□ -0.05
TPM1-215ENST00000558868 TMCO5BA8MYB1 307 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 GPR182O15218 404 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 RPS6KA5O75582 802 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 PALMO75781 387 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 ATP1A1P05023 1023 aaKnown RBP14.74□□□□□ -0.05
TPM1-215ENST00000558868 ITGB3P05106 788 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 TCP1P17987 556 aaKnown RBP14.74□□□□□ -0.05
TPM1-215ENST00000558868 ZNF132P52740 706 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 CKAP4Q07065 602 aaKnown RBP14.74□□□□□ -0.05
TPM1-215ENST00000558868 MYO1EQ12965 1108 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 CLEC16AQ2KHT3 1053 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 ACAD10Q6JQN1 1059 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 FAM228AQ86W67 206 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 TMEM40Q8WWA1 233 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 BEGAINQ9BUH8 593 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 CARD6Q9BX69 1037 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 EIF2AQ9BY44 585 aaKnown RBP14.74□□□□□ -0.05
TPM1-215ENST00000558868 SENP6Q9GZR1 1112 aaPredicted RBP14.74□□□□□ -0.05
TPM1-215ENST00000558868 CISHQ9NSE2 258 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 CNTN3Q9P232 1028 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 SIX4Q9UIU6 781 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 SALL4Q9UJQ4 1053 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 NOC2LQ9Y3T9 749 aaKnown RBP14.74□□□□□ -0.05
TPM1-215ENST00000558868 HYOU1Q9Y4L1 999 aa14.74□□□□□ -0.05
TPM1-215ENST00000558868 RALGAPA2Q2PPJ7 1873 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms