RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A LSM1P47017 172 aaKnown RBP13.2□□□□□ -0.3
TRN1tP(UGG)A GPG1P53130 126 aa13.2□□□□□ -0.3
TRN1tP(UGG)A SWD3P38123 315 aa13.19□□□□□ -0.3
TRN1tP(UGG)A YBR197CP38306 217 aa13.19□□□□□ -0.3
TRN1tP(UGG)A GTF1P53260 183 aaPredicted RBP13.19□□□□□ -0.3
TRN1tP(UGG)A DMA2P53924 522 aa13.19□□□□□ -0.3
TRN1tP(UGG)A LIP2Q06005 328 aa13.19□□□□□ -0.3
TRN1tP(UGG)A YCL048W-AQ2V2Q2 79 aa13.19□□□□□ -0.3
TRN1tP(UGG)A SPO24Q3E752 67 aa13.19□□□□□ -0.3
TRN1tP(UGG)A NHP6BP11633 99 aaKnown RBP13.18□□□□□ -0.3
TRN1tP(UGG)A ACH1P32316 526 aa13.18□□□□□ -0.3
TRN1tP(UGG)A SGN1P40561 250 aaKnown RBP RIP-Chip data13.18□□□□□ -0.3not detected
TRN1tP(UGG)A OKP1P53298 406 aa13.18□□□□□ -0.3
TRN1tP(UGG)A MRPS16Q02608 121 aa13.18□□□□□ -0.3
TRN1tP(UGG)A SYM1Q06563 197 aa13.18□□□□□ -0.3
TRN1tP(UGG)A FRE8Q12209 686 aa13.18□□□□□ -0.3
TRN1tP(UGG)A MED4Q12343 284 aa13.18□□□□□ -0.3
TRN1tP(UGG)A YOR192C-CQ3E736 78 aa13.18□□□□□ -0.3
TRN1tP(UGG)A UBA3Q99344 299 aa13.18□□□□□ -0.3
TRN1tP(UGG)A VMA3P25515 160 aa13.17□□□□□ -0.3
TRN1tP(UGG)A FLO10P36170 1169 aa13.17□□□□□ -0.3
TRN1tP(UGG)A YHL044WP38727 235 aa13.17□□□□□ -0.3
TRN1tP(UGG)A AIM46P38885 310 aa13.17□□□□□ -0.3
TRN1tP(UGG)A NCA3P46955 337 aa13.17□□□□□ -0.3
TRN1tP(UGG)A INN1P53901 409 aa13.17□□□□□ -0.3
TRN1tP(UGG)A VBA1Q04301 562 aa13.17□□□□□ -0.3
TRN1tP(UGG)A YDR286CQ05530 114 aa13.17□□□□□ -0.3
TRN1tP(UGG)A YOR029WQ12243 111 aa13.17□□□□□ -0.3
TRN1tP(UGG)A SCM3Q12334 223 aa13.17□□□□□ -0.3
TRN1tP(UGG)A RTR2Q12378 196 aa13.17□□□□□ -0.3
TRN1tP(UGG)A SEN2P16658 377 aa13.16□□□□□ -0.3
TRN1tP(UGG)A NTC20P38302 140 aaPredicted RBP13.16□□□□□ -0.3
TRN1tP(UGG)A DIE2P50076 525 aa13.16□□□□□ -0.3
TRN1tP(UGG)A SOL1P50278 321 aa13.16□□□□□ -0.3
TRN1tP(UGG)A GEP7P53171 287 aa13.16□□□□□ -0.3
TRN1tP(UGG)A SLX9P53251 210 aaPredicted RBP13.16□□□□□ -0.3
TRN1tP(UGG)A YNR064CP53750 290 aa13.16□□□□□ -0.3
TRN1tP(UGG)A RFM1Q12192 310 aa13.16□□□□□ -0.3
TRN1tP(UGG)A CPR4P25334 318 aa13.15□□□□□ -0.3
TRN1tP(UGG)A YCL042WP25572 119 aa13.15□□□□□ -0.3
TRN1tP(UGG)A POP8P38208 133 aa13.15□□□□□ -0.3
TRN1tP(UGG)A PIR5P46999 287 aa13.15□□□□□ -0.3
TRN1tP(UGG)A SMM1P53720 384 aaKnown RBP13.15□□□□□ -0.3
TRN1tP(UGG)A FIT1Q04433 528 aa13.15□□□□□ -0.3
TRN1tP(UGG)A TRM13Q12383 476 aa13.15□□□□□ -0.3
TRN1tP(UGG)A GEP5Q12393 293 aa13.15□□□□□ -0.3
TRN1tP(UGG)A RPB7P34087 171 aa13.14□□□□□ -0.31
TRN1tP(UGG)A XPT1P47165 209 aa13.14□□□□□ -0.31
TRN1tP(UGG)A HSK3P69852 69 aa13.14□□□□□ -0.31
TRN1tP(UGG)A YOL118CQ08259 102 aa13.14□□□□□ -0.31
TRN1tP(UGG)A VAM3Q12241 283 aa13.14□□□□□ -0.31
TRN1tP(UGG)A YLR365WQ7LIF2 110 aa13.14□□□□□ -0.31
TRN1tP(UGG)A YMR105W-AQ8TGS8 64 aa13.14□□□□□ -0.31
TRN1tP(UGG)A GAL1P04385 528 aa13.13□□□□□ -0.31
TRN1tP(UGG)A BUD23P25627 275 aaPredicted RBP13.13□□□□□ -0.31
TRN1tP(UGG)A COS8P38723 381 aa13.13□□□□□ -0.31
TRN1tP(UGG)A YIR020CP40575 100 aa13.13□□□□□ -0.31
TRN1tP(UGG)A NRG1Q03125 231 aa13.13□□□□□ -0.31
TRN1tP(UGG)A CAB5Q03941 241 aa13.13□□□□□ -0.31
TRN1tP(UGG)A TSA2Q04120 196 aa13.13□□□□□ -0.31
TRN1tP(UGG)A SCP1Q08873 200 aa13.13□□□□□ -0.31
TRN1tP(UGG)A URA2P07259 2214 aaKnown RBP13.12□□□□□ -0.31
TRN1tP(UGG)A CKA1P15790 372 aa13.12□□□□□ -0.31
TRN1tP(UGG)A MRP17P28778 131 aa13.12□□□□□ -0.31
TRN1tP(UGG)A GRX2P17695 143 aaKnown RBP13.11□□□□□ -0.31
TRN1tP(UGG)A SWD2P36104 329 aaPredicted RBP13.11□□□□□ -0.31
TRN1tP(UGG)A BMT5P40493 336 aa13.11□□□□□ -0.31
TRN1tP(UGG)A RPL21AQ02753 160 aaKnown RBP13.11□□□□□ -0.31
TRN1tP(UGG)A YDL009CQ12210 107 aa13.11□□□□□ -0.31
TRN1tP(UGG)A RDL1Q12305 139 aaKnown RBP13.11□□□□□ -0.31
TRN1tP(UGG)A RPL21BQ12672 160 aaKnown RBP13.11□□□□□ -0.31
TRN1tP(UGG)A MIR1P23641 311 aaKnown RBP13.1□□□□□ -0.31
TRN1tP(UGG)A TRR1P29509 319 aaKnown RBP13.1□□□□□ -0.31
TRN1tP(UGG)A PPQ1P32945 549 aa13.1□□□□□ -0.31
TRN1tP(UGG)A BOL3P39724 118 aa13.1□□□□□ -0.31
TRN1tP(UGG)A IRC25Q07951 179 aa13.1□□□□□ -0.31
TRN1tP(UGG)A CSI2Q08054 341 aa13.1□□□□□ -0.31
TRN1tP(UGG)A FUS3P16892 353 aaKnown RBP13.09□□□□□ -0.31
TRN1tP(UGG)A YHC3P47040 408 aa13.09□□□□□ -0.31
TRN1tP(UGG)A UBP8P50102 471 aa13.09□□□□□ -0.31
TRN1tP(UGG)A SMX3P54999 86 aaPredicted RBP13.09□□□□□ -0.31
TRN1tP(UGG)A NGL2Q03264 515 aaKnown RBP13.09□□□□□ -0.31
TRN1tP(UGG)A DPB4Q04603 196 aaKnown RBP13.09□□□□□ -0.31
TRN1tP(UGG)A RTT103Q05543 409 aa13.09□□□□□ -0.31
TRN1tP(UGG)A NOC4Q06512 552 aaPredicted RBP13.09□□□□□ -0.31
TRN1tP(UGG)A FEX2Q08991 375 aa13.09□□□□□ -0.31
TRN1tP(UGG)A SWT1Q12104 458 aa13.09□□□□□ -0.31
TRN1tP(UGG)A YPR108W-AQ3E7B3 70 aa13.09□□□□□ -0.31
TRN1tP(UGG)A GDH1P07262 454 aaKnown RBP13.08□□□□□ -0.32
TRN1tP(UGG)A GCN3P14741 305 aa13.08□□□□□ -0.32
TRN1tP(UGG)A SAR1P20606 190 aaKnown RBP13.08□□□□□ -0.32
TRN1tP(UGG)A APA2P22108 325 aa13.08□□□□□ -0.32
TRN1tP(UGG)A YGL262WP53054 175 aa13.08□□□□□ -0.32
TRN1tP(UGG)A ECM18Q04623 453 aa13.08□□□□□ -0.32
TRN1tP(UGG)A RIM9Q04734 239 aa13.08□□□□□ -0.32
TRN1tP(UGG)A YCR016WP25617 290 aaKnown RBP13.07□□□□□ -0.32
TRN1tP(UGG)A GPI18P38211 433 aa13.07□□□□□ -0.32
TRN1tP(UGG)A PAC2P39937 518 aa13.07□□□□□ -0.32
TRN1tP(UGG)A PRM5P40476 318 aa13.07□□□□□ -0.32
TRN1tP(UGG)A ARG80P07249 177 aa13.06□□□□□ -0.32
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms