RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 FMP49A0A023PZB3 126 aa-0.86□□□□□ -2.55
snR56snR56 FMP33P46998 180 aa-0.87□□□□□ -2.55
snR56snR56 ALG11P53954 548 aaKnown RBP-0.87□□□□□ -2.55
snR56snR56 SPG4Q04438 115 aa-0.87□□□□□ -2.55
snR56snR56 YOR029WQ12243 111 aa-0.87□□□□□ -2.55
snR56snR56 MET16P18408 261 aaPredicted RBP-0.88□□□□□ -2.55
snR56snR56 MRPL39P36533 70 aa-0.88□□□□□ -2.55
snR56snR56 YBR063CP38083 404 aa-0.88□□□□□ -2.55
snR56snR56 YBR209WP38311 105 aa-0.88□□□□□ -2.55
snR56snR56 DDI1P40087 428 aa-0.88□□□□□ -2.55
snR56snR56 YNL046WP53956 172 aa-0.88□□□□□ -2.55
snR56snR56 OPY1P38271 328 aa-0.89□□□□□ -2.55
snR56snR56 MRX5P47007 382 aa-0.89□□□□□ -2.55
snR56snR56 HAM1P47119 197 aaKnown RBP-0.89□□□□□ -2.55
snR56snR56 ERV41Q04651 352 aa-0.89□□□□□ -2.55
snR56snR56 BLI1P35727 113 aa-0.9□□□□□ -2.55
snR56snR56 SNZ2P53824 298 aa-0.9□□□□□ -2.55
snR56snR56 MEK1P24719 497 aaPredicted RBP-0.91□□□□□ -2.56
snR56snR56 COA1P40452 197 aa-0.91□□□□□ -2.56
snR56snR56 MRPL40P36534 297 aa-0.92□□□□□ -2.56
snR56snR56 GOS1P38736 223 aa-0.92□□□□□ -2.56
snR56snR56 GCD14P46959 383 aaPredicted RBP-0.92□□□□□ -2.56
snR56snR56 MRPS28P21771 286 aa-0.93□□□□□ -2.56
snR56snR56 HYR1P40581 163 aaKnown RBP-0.93□□□□□ -2.56
snR56snR56 PNC1P53184 216 aaKnown RBP-0.93□□□□□ -2.56
snR56snR56 YMR252CQ04814 134 aa-0.93□□□□□ -2.56
snR56snR56 HIS1P00498 297 aaKnown RBP-0.94□□□□□ -2.56
snR56snR56 RPS5P26783 225 aaKnown RBP-0.94□□□□□ -2.56
snR56snR56 YBR096WP38256 230 aa-0.94□□□□□ -2.56
snR56snR56 UMP1P38293 148 aa-0.94□□□□□ -2.56
snR56snR56 KAP114P53067 1004 aa-0.94□□□□□ -2.56
snR56snR56 YHR007C-AQ07074 71 aa-0.94□□□□□ -2.56
snR56snR56 SIR2P06700 562 aa-0.95□□□□□ -2.56
snR56snR56 GLG2P47011 380 aa-0.95□□□□□ -2.56
snR56snR56 REP2P03872 296 aa-0.96□□□□□ -2.56
snR56snR56 YCL042WP25572 119 aa-0.96□□□□□ -2.56
snR56snR56 PRX1P34227 261 aaKnown RBP-0.96□□□□□ -2.56
snR56snR56 SMB1P40018 196 aaKnown RBP-0.96□□□□□ -2.56
snR56snR56 CAT5P41735 233 aa-0.96□□□□□ -2.56
snR56snR56 YFH7P43591 353 aa-0.96□□□□□ -2.56
snR56snR56 YPR098CQ06089 161 aa-0.96□□□□□ -2.56
snR56snR56 FSF1Q12029 327 aaKnown RBP-0.96□□□□□ -2.56
snR56snR56 ERD2P18414 219 aa-0.97□□□□□ -2.56
snR56snR56 OST6Q03723 332 aa-0.97□□□□□ -2.56
snR56snR56 GMC2Q06201 188 aa-0.97□□□□□ -2.56
snR56snR56 YPL229WQ99395 206 aa-0.97□□□□□ -2.56
snR56snR56 SGE1P33335 543 aa-0.98□□□□□ -2.57
snR56snR56 SSQ1Q05931 657 aaPredicted RBP-0.98□□□□□ -2.57
snR56snR56 FMP16Q12497 93 aa-0.98□□□□□ -2.57
snR56snR56 ATG40Q99325 256 aa-0.98□□□□□ -2.57
snR56snR56 TUS1Q06412 1307 aa-0.98□□□□□ -2.57
snR56snR56 SEC11P15367 167 aa-0.99□□□□□ -2.57
snR56snR56 VMA22P38784 181 aa-0.99□□□□□ -2.57
snR56snR56 YNL010WP53981 241 aaKnown RBP-0.99□□□□□ -2.57
snR56snR56 YLR236CA0A023PZG4 107 aa-1□□□□□ -2.57
snR56snR56 PRS2P38620 318 aaKnown RBP-1□□□□□ -2.57
snR56snR56 OSW5P40219 148 aa-1□□□□□ -2.57
snR56snR56 YLR460CP54007 376 aa-1□□□□□ -2.57
snR56snR56 ABF2Q02486 183 aa-1□□□□□ -2.57
snR56snR56 HOM6P31116 359 aaKnown RBP-1.01□□□□□ -2.57
snR56snR56 YEL008WP40001 126 aa-1.01□□□□□ -2.57
snR56snR56 SNC2P33328 115 aa-1.02□□□□□ -2.57
snR56snR56 ILM1P47155 203 aa-1.02□□□□□ -2.57
snR56snR56 YML096WQ04489 525 aa-1.02□□□□□ -2.57
snR56snR56 YDR286CQ05530 114 aa-1.03□□□□□ -2.57
snR56snR56 PGC1Q08959 321 aa-1.03□□□□□ -2.57
snR56snR56 CDC36P06100 191 aaPredicted RBP-1.04□□□□□ -2.58
snR56snR56 YPR170W-BP0C5R9 85 aa-1.04□□□□□ -2.58
snR56snR56 COA3Q3E7B2 85 aa-1.04□□□□□ -2.58
snR56snR56 SHE2P36068 246 aaKnown RBP RIP-Chip data-1.05□□□□□ -2.58not detected
snR56snR56 MRPL17P36528 281 aa-1.05□□□□□ -2.58
snR56snR56 RAD28Q12021 506 aa-1.05□□□□□ -2.58
snR56snR56 SPT7P35177 1332 aa-1.06□□□□□ -2.58
snR56snR56 MDM35O60200 86 aa-1.06□□□□□ -2.58
snR56snR56 URA8P38627 578 aaPredicted RBP-1.06□□□□□ -2.58
snR56snR56 IRC22P40006 225 aa-1.06□□□□□ -2.58
snR56snR56 EAF6P47128 113 aa-1.06□□□□□ -2.58
snR56snR56 CUE4Q04201 117 aaPredicted RBP-1.06□□□□□ -2.58
snR56snR56 SEI1Q06058 285 aa-1.06□□□□□ -2.58
snR56snR56 GPM2Q12008 311 aa-1.06□□□□□ -2.58
snR56snR56 DBF2P22204 572 aa-1.08□□□□□ -2.58
snR56snR56 TRX1P22217 103 aaKnown RBP-1.08□□□□□ -2.58
snR56snR56 MRPL15P36523 253 aa-1.08□□□□□ -2.58
snR56snR56 SWP1Q02795 286 aa-1.08□□□□□ -2.58
snR56snR56 YDR248CQ03786 193 aa-1.08□□□□□ -2.58
snR56snR56 RIB1P38066 345 aa-1.09□□□□□ -2.58
snR56snR56 YHR127WP38833 243 aaKnown RBP-1.09□□□□□ -2.58
snR56snR56 PRE6P40303 254 aaKnown RBP-1.09□□□□□ -2.58
snR56snR56 YIL102CP40488 101 aa-1.09□□□□□ -2.58
snR56snR56 YPR203WQ08994 102 aa-1.09□□□□□ -2.58
snR56snR56 SSK22P25390 1331 aaPredicted RBP-1.1□□□□□ -2.59
snR56snR56 RHO3Q00245 231 aaKnown RBP-1.1□□□□□ -2.59
snR56snR56 SNZ1Q03148 297 aa-1.1□□□□□ -2.59
snR56snR56 CCW12Q12127 133 aa-1.1□□□□□ -2.59
snR56snR56 YRA1Q12159 226 aaKnown RBP-1.1□□□□□ -2.59
snR56snR56 YLR156WP0CE96 114 aa-1.11□□□□□ -2.59
snR56snR56 YLR159WP0CE97 114 aa-1.11□□□□□ -2.59
snR56snR56 YLR161WP0CE98 114 aa-1.11□□□□□ -2.59
snR56snR56 RPT5P33297 434 aaKnown RBP-1.11□□□□□ -2.59
snR56snR56 DID2P69771 204 aa-1.11□□□□□ -2.59
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms