RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	VAB2	P40003	282 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	YNL208W	P40159	199 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	BMT5	P40493	336 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	AIM23	P47015	356 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	EAF6	P47128	113 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	RPL4B	P49626	362 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	BNS1	P50084	137 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	ARO8	P53090	500 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	GTR2	P53290	341 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	SSU72	P53538	206 aa	Predicted RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	YIP3	P53633	176 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	LSM3	P57743	89 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	PRP38	Q00723	242 aa	Predicted RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	CSN9	Q03981	162 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	HPT1	Q04178	221 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	TRM12	Q04235	462 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	PEX12	Q04370	399 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	YMR321C	Q04898	105 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	DPP1	Q05521	289 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	GRX8	Q05926	109 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	ARC18	Q05933	178 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	PEX30	Q06169	523 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	LOA1	Q06508	300 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	GPI11	Q06636	219 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	DTD1	Q07648	150 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	PER33	Q12144	273 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	JLP1	Q12358	412 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	BBP1	Q12365	385 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	TRM10	Q12400	293 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	FOL3	Q12676	427 aa	Predicted RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	EFG1	Q3E705	233 aa	Known RBP	2.17	□□□□□ -2.06
ISU1	YPL135W	YPL119C-A	Q3E751	87 aa		2.17	□□□□□ -2.06
ISU1	YPL135W	YAL064W-B	O13512	126 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	RPS18A	P0CX55	146 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	RPS18B	P0CX56	146 aa	Predicted RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	URA6	P15700	204 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	ERD1	P16151	362 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	AAT2	P23542	418 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	MIR1	P23641	311 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	GIT1	P25346	518 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	INO2	P26798	304 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	UBC8	P28263	218 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	PMT2	P31382	759 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	YEL045C	P32616	141 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	ALK2	P32789	676 aa	Predicted RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	KTI12	P34253	313 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	JEN1	P36035	616 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	CAF4	P36130	643 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	MRPL17	P36528	281 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	MRP21	P38175	177 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	CHL4	P38907	458 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	PET8	P38921	284 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	IPT1	P38954	527 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	PTI1	P39927	425 aa	Predicted RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	MIG3	P39943	394 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	OXA1	P39952	402 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	YER121W	P40076	114 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	YER186C	P40101	306 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	MOB2	P43563	287 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	IRC18	P47056	224 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	YJR149W	P47177	404 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	NUP57	P48837	541 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	PRP24	P49960	444 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	YPS5	P53057	165 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	ALG13	P53178	202 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	SLX9	P53251	210 aa	Predicted RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.16	□□□□□ -2.06	not detected
ISU1	YPL135W	YNL140C	P53910	189 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	RMI1	Q02685	241 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	PRM15	Q03262	622 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	SCS7	Q03529	384 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	YML018C	Q03730	393 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	GMC1	Q04399	608 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	COA4	Q05809	96 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	LIP2	Q06005	328 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	COQ10	Q08058	207 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	BRX1	Q08235	291 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	TMC1	Q08422	150 aa	Predicted RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	MMT2	Q08970	484 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	SNU23	Q12368	194 aa	Predicted RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	YKL018C-A	Q3E7A7	99 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	RIB3	Q99258	208 aa		2.16	□□□□□ -2.06
ISU1	YPL135W	SLH1	P53327	1967 aa	Known RBP	2.16	□□□□□ -2.06
ISU1	YPL135W	COX5A	P00424	153 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	MET2	P08465	486 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	COS2	P0CX12	379 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	COS3	P0CX13	379 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	RPS1A	P33442	255 aa	Known RBP	2.15	□□□□□ -2.07
ISU1	YPL135W	YOX1	P34161	385 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	UTP30	P36144	274 aa	Known RBP	2.15	□□□□□ -2.07
ISU1	YPL135W	YCR087C-A	P37263	153 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	SHG1	P38337	142 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	ARN2	P38724	620 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	BAT1	P38891	393 aa	Known RBP	2.15	□□□□□ -2.07
ISU1	YPL135W	YEL028W	P39989	153 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	HEM14	P40012	539 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	COS4	P43542	379 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	FAR7	P43592	221 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	ATG18	P43601	500 aa		2.15	□□□□□ -2.07
ISU1	YPL135W	MCM22	P47167	239 aa		2.15	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 90.1 ms