RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C YDR132CQ03900 495 aa3.68□□□□□ -1.82
VHS3YOR054C CDD1Q06549 142 aa3.68□□□□□ -1.82
VHS3YOR054C ERV2Q12284 196 aa3.68□□□□□ -1.82
VHS3YOR054C ISA2Q12425 185 aa3.68□□□□□ -1.82
VHS3YOR054C PRO1P32264 428 aa3.67□□□□□ -1.82
VHS3YOR054C ERG3P32353 365 aa3.67□□□□□ -1.82
VHS3YOR054C MF(ALPHA)2P32435 120 aa3.67□□□□□ -1.82
VHS3YOR054C UPS2P35200 230 aa3.67□□□□□ -1.82
VHS3YOR054C RPS20P38701 121 aaKnown RBP3.67□□□□□ -1.82
VHS3YOR054C DLS1P40366 167 aa3.67□□□□□ -1.82
VHS3YOR054C PHS1P40857 217 aa3.67□□□□□ -1.82
VHS3YOR054C CDC40P40968 455 aaPredicted RBP3.67□□□□□ -1.82
VHS3YOR054C GPP1P41277 250 aaKnown RBP3.67□□□□□ -1.82
VHS3YOR054C RPA43P46669 326 aa3.67□□□□□ -1.82
VHS3YOR054C UBP8P50102 471 aa3.67□□□□□ -1.82
VHS3YOR054C PGA1P53896 198 aa3.67□□□□□ -1.82
VHS3YOR054C EOS1P53938 366 aa3.67□□□□□ -1.82
VHS3YOR054C MSC2Q03455 724 aa3.67□□□□□ -1.82
VHS3YOR054C RCE1Q03530 315 aa3.67□□□□□ -1.82
VHS3YOR054C BSC6Q08280 497 aa3.67□□□□□ -1.82
VHS3YOR054C DCI1Q08558 271 aa3.67□□□□□ -1.82
VHS3YOR054C FSF1Q12029 327 aaKnown RBP3.67□□□□□ -1.82
VHS3YOR054C YOR015WQ12169 119 aa3.67□□□□□ -1.82
VHS3YOR054C HUT1Q12520 339 aa3.67□□□□□ -1.82
VHS3YOR054C YCL012CQ8J0M4 134 aa3.67□□□□□ -1.82
VHS3YOR054C TDH3P00359 332 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
VHS3YOR054C URK1P27515 501 aa3.66□□□□□ -1.82
VHS3YOR054C YKL107WP34251 309 aa3.66□□□□□ -1.82
VHS3YOR054C ZTA1P38230 334 aaKnown RBP3.66□□□□□ -1.82
VHS3YOR054C ICS2P38284 255 aa3.66□□□□□ -1.82
VHS3YOR054C SNU13P39990 126 aaKnown RBP3.66□□□□□ -1.82
VHS3YOR054C SDP1P40479 209 aa3.66□□□□□ -1.82
VHS3YOR054C YIL060WP40519 144 aa3.66□□□□□ -1.82
VHS3YOR054C OTU1P43558 301 aa3.66□□□□□ -1.82
VHS3YOR054C IKS1P47042 667 aa3.66□□□□□ -1.82
VHS3YOR054C PET130P47065 347 aa3.66□□□□□ -1.82
VHS3YOR054C NIF3P53081 288 aa3.66□□□□□ -1.82
VHS3YOR054C EFM6P53970 246 aa3.66□□□□□ -1.82
VHS3YOR054C MTQ2Q03920 221 aaPredicted RBP3.66□□□□□ -1.82
VHS3YOR054C TMN2Q04562 672 aa3.66□□□□□ -1.82
VHS3YOR054C TGS1Q12052 315 aa3.66□□□□□ -1.82
VHS3YOR054C IZH2Q12442 317 aa3.66□□□□□ -1.82
VHS3YOR054C RAX2Q12465 1220 aa3.66□□□□□ -1.82
VHS3YOR054C TOR2P32600 2474 aaKnown RBP3.66□□□□□ -1.82
VHS3YOR054C PAI3P01094 68 aa3.66□□□□□ -1.82
VHS3YOR054C STF1P01098 86 aa3.66□□□□□ -1.82
VHS3YOR054C DCG1P32460 244 aa3.66□□□□□ -1.82
VHS3YOR054C PPZ2P33329 710 aa3.66□□□□□ -1.82
VHS3YOR054C PRP18P33411 251 aaPredicted RBP3.66□□□□□ -1.82
VHS3YOR054C MRPL16P38064 232 aa3.66□□□□□ -1.82
VHS3YOR054C MIX23P38162 196 aa3.66□□□□□ -1.82
VHS3YOR054C WSS1P38838 269 aa3.66□□□□□ -1.82
VHS3YOR054C YIL067CP40514 678 aa3.66□□□□□ -1.82
VHS3YOR054C ATG27P46989 271 aa3.66□□□□□ -1.82
VHS3YOR054C VPS25P47142 202 aa3.66□□□□□ -1.82
VHS3YOR054C YJR124CP47159 448 aa3.66□□□□□ -1.82
VHS3YOR054C MUP1P50276 574 aa3.66□□□□□ -1.82
VHS3YOR054C SGF73P53165 657 aa3.66□□□□□ -1.82
VHS3YOR054C YPL077CQ02831 240 aa3.66□□□□□ -1.82
VHS3YOR054C YLR036CQ07986 203 aa3.66□□□□□ -1.82
VHS3YOR054C YDL157CQ12082 118 aa3.66□□□□□ -1.82
VHS3YOR054C RPL13AQ12690 199 aaPredicted RBP3.66□□□□□ -1.82
VHS3YOR054C YLR149CQ99296 730 aa3.66□□□□□ -1.82
VHS3YOR054C YPR096CO13587 100 aa3.65□□□□□ -1.82
VHS3YOR054C MBF1O14467 151 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C INH1P01097 85 aa3.65□□□□□ -1.82
VHS3YOR054C CPA1P07258 411 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C YFL068WP0CX99 160 aa3.65□□□□□ -1.82
VHS3YOR054C YLL066W-AP0CY00 160 aa3.65□□□□□ -1.82
VHS3YOR054C YLL067W-AP0CY01 160 aa3.65□□□□□ -1.82
VHS3YOR054C SCH9P11792 824 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C ANB1P19211 157 aa3.65□□□□□ -1.82
VHS3YOR054C DAL82P21705 255 aa3.65□□□□□ -1.82
VHS3YOR054C PEX7P39108 375 aa3.65□□□□□ -1.82
VHS3YOR054C HEM14P40012 539 aa3.65□□□□□ -1.82
VHS3YOR054C AIR1P40507 360 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C SMK1P41808 388 aa3.65□□□□□ -1.82
VHS3YOR054C CIN2P46670 268 aa3.65□□□□□ -1.82
VHS3YOR054C BUD25P85052 153 aa3.65□□□□□ -1.82
VHS3YOR054C HNT1Q04344 158 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C YMR321CQ04898 105 aa3.65□□□□□ -1.82
VHS3YOR054C HRI1Q05905 244 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C TPT1Q12272 230 aaKnown RBP3.65□□□□□ -1.82
VHS3YOR054C YDL007C-AQ2V2Q0 85 aa3.65□□□□□ -1.82
VHS3YOR054C CCH1P50077 2039 aa3.65□□□□□ -1.82
VHS3YOR054C TIR1P10863 254 aa3.65□□□□□ -1.83
VHS3YOR054C RPB5P20434 215 aa3.65□□□□□ -1.83
VHS3YOR054C ERG4P25340 473 aa3.65□□□□□ -1.83
VHS3YOR054C FEN2P25621 512 aaKnown RBP3.65□□□□□ -1.83
VHS3YOR054C FMT1P32785 401 aa3.65□□□□□ -1.83
VHS3YOR054C THI80P35202 319 aa3.65□□□□□ -1.83
VHS3YOR054C MRPL27P36526 146 aaPredicted RBP3.65□□□□□ -1.83
VHS3YOR054C DOG1P38774 246 aa3.65□□□□□ -1.83
VHS3YOR054C FLO5P38894 1075 aa3.65□□□□□ -1.83
VHS3YOR054C SMD3P43321 101 aaKnown RBP3.65□□□□□ -1.83
VHS3YOR054C YNL140CP53910 189 aa3.65□□□□□ -1.83
VHS3YOR054C HHT1P61830 136 aa3.65□□□□□ -1.83
VHS3YOR054C YPL062WQ02781 134 aa3.65□□□□□ -1.83
VHS3YOR054C INP1Q03694 420 aa3.65□□□□□ -1.83
VHS3YOR054C SPG3Q04398 127 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms