RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C TMA10Q06177 86 aa2.34□□□□□ -2.04
YMR050CYMR050C FRQ1Q06389 190 aa2.34□□□□□ -2.04
YMR050CYMR050C FUR4P05316 633 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C RPS22AP0C0W1 130 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C RPS18AP0CX55 146 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C RPS18BP0CX56 146 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C DPM1P14020 267 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C OAC1P32332 324 aa2.33□□□□□ -2.04
YMR050CYMR050C PRY2P36110 329 aa2.33□□□□□ -2.04
YMR050CYMR050C UTP30P36144 274 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C YHR177WP38867 453 aa2.33□□□□□ -2.04
YMR050CYMR050C POP2P39008 433 aa2.33□□□□□ -2.04
YMR050CYMR050C YIL169CP40442 995 aa2.33□□□□□ -2.04
YMR050CYMR050C AIM11P87275 137 aa2.33□□□□□ -2.04
YMR050CYMR050C YPK2P18961 677 aa2.33□□□□□ -2.04
YMR050CYMR050C CPR2P23285 205 aa2.33□□□□□ -2.04
YMR050CYMR050C RPS2P25443 254 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C HOM6P31116 359 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C PAN3P36102 679 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C MRPL24P36525 258 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C THI2P38141 450 aa2.33□□□□□ -2.04
YMR050CYMR050C MRPL49P40858 161 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C SAD1P43589 448 aa2.33□□□□□ -2.04
YMR050CYMR050C NCE101Q02820 53 aa2.33□□□□□ -2.04
YMR050CYMR050C DIG1Q03063 452 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C YMR187CQ03236 431 aa2.33□□□□□ -2.04
YMR050CYMR050C GTO3Q04806 366 aa2.33□□□□□ -2.04
YMR050CYMR050C YOR186WQ08560 144 aa2.33□□□□□ -2.04
YMR050CYMR050C PST2Q12335 198 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C YLR111WQ12528 110 aa2.33□□□□□ -2.04
YMR050CYMR050C RIB3Q99258 208 aa2.33□□□□□ -2.04
YMR050CYMR050C CDC20P26309 610 aa2.33□□□□□ -2.04
YMR050CYMR050C MRPL38P35996 138 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C YKL077WP36081 392 aa2.33□□□□□ -2.04
YMR050CYMR050C CSH1P38287 376 aa2.33□□□□□ -2.04
YMR050CYMR050C STP2P38704 541 aa2.33□□□□□ -2.04
YMR050CYMR050C ECM34P38728 170 aa2.33□□□□□ -2.04
YMR050CYMR050C SSN8P47821 323 aa2.33□□□□□ -2.04
YMR050CYMR050C RPC11Q04307 110 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C TVP18Q04767 167 aa2.33□□□□□ -2.04
YMR050CYMR050C YPR071WQ12346 211 aa2.33□□□□□ -2.04
YMR050CYMR050C RPS21BQ3E754 87 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C RPS22BQ3E7Y3 130 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C RRP5Q05022 1729 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C MEK1P24719 497 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C NDC1P32500 655 aa2.33□□□□□ -2.04
YMR050CYMR050C ALK2P32789 676 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C ALG14P38242 237 aa2.33□□□□□ -2.04
YMR050CYMR050C AIM2P39721 246 aa2.33□□□□□ -2.04
YMR050CYMR050C MID1P41821 548 aa2.33□□□□□ -2.04
YMR050CYMR050C LOA1Q06508 300 aa2.33□□□□□ -2.04
YMR050CYMR050C YPL225WQ08971 146 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C YCT1Q12235 531 aa2.33□□□□□ -2.04
YMR050CYMR050C SAL1D6W196 494 aa2.33□□□□□ -2.04
YMR050CYMR050C YIL086CP40503 102 aa2.33□□□□□ -2.04
YMR050CYMR050C ERJ5P43613 295 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C SLX9P53251 210 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C YNL165WP53891 406 aa2.33□□□□□ -2.04
YMR050CYMR050C TMA46Q12000 345 aaKnown RBP2.33□□□□□ -2.04
YMR050CYMR050C SME1Q12330 94 aaPredicted RBP2.33□□□□□ -2.04
YMR050CYMR050C YCL021W-AQ96VH3 125 aa2.33□□□□□ -2.04
YMR050CYMR050C RPB3P16370 318 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C ERS1P17261 260 aa2.32□□□□□ -2.04
YMR050CYMR050C DBR1P24309 405 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C RHB1P25378 209 aa2.32□□□□□ -2.04
YMR050CYMR050C RPL16AP26784 199 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C NTG1P31378 399 aa2.32□□□□□ -2.04
YMR050CYMR050C AUR1P36107 401 aaPredicted RBP2.32□□□□□ -2.04
YMR050CYMR050C YPT32P51996 222 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C YMR209CQ03648 457 aa2.32□□□□□ -2.04
YMR050CYMR050C HOR7Q05827 59 aa2.32□□□□□ -2.04
YMR050CYMR050C SMT3Q12306 101 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C CDC7P06243 507 aa2.32□□□□□ -2.04
YMR050CYMR050C YUH1P35127 236 aa2.32□□□□□ -2.04
YMR050CYMR050C MRPL3P36516 390 aa2.32□□□□□ -2.04
YMR050CYMR050C VPS55P47111 140 aa2.32□□□□□ -2.04
YMR050CYMR050C YGL159WP53110 370 aa2.32□□□□□ -2.04
YMR050CYMR050C YGR054WP53235 642 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C APS2Q00381 147 aa2.32□□□□□ -2.04
YMR050CYMR050C YOL019WQ08157 551 aa2.32□□□□□ -2.04
YMR050CYMR050C HRT1Q08273 121 aa2.32□□□□□ -2.04
YMR050CYMR050C MED11Q99278 115 aa2.32□□□□□ -2.04
YMR050CYMR050C GAL1P04385 528 aa2.32□□□□□ -2.04
YMR050CYMR050C TRX3P25372 127 aa2.32□□□□□ -2.04
YMR050CYMR050C POF1P25576 258 aa2.32□□□□□ -2.04
YMR050CYMR050C MRP17P28778 131 aa2.32□□□□□ -2.04
YMR050CYMR050C ISF1P32488 338 aa2.32□□□□□ -2.04
YMR050CYMR050C UTH1P36135 365 aa2.32□□□□□ -2.04
YMR050CYMR050C MED8P38304 223 aa2.32□□□□□ -2.04
YMR050CYMR050C RPB11P38902 120 aa2.32□□□□□ -2.04
YMR050CYMR050C FLX1P40464 311 aa2.32□□□□□ -2.04
YMR050CYMR050C HXT10P43581 546 aa2.32□□□□□ -2.04
YMR050CYMR050C IMD3P50095 523 aaKnown RBP2.32□□□□□ -2.04
YMR050CYMR050C NUP49Q02199 472 aa2.32□□□□□ -2.04
YMR050CYMR050C SYM1Q06563 197 aa2.32□□□□□ -2.04
YMR050CYMR050C PFA4Q12006 378 aa2.32□□□□□ -2.04
YMR050CYMR050C RAD28Q12021 506 aa2.32□□□□□ -2.04
YMR050CYMR050C LAS17Q12446 633 aa2.32□□□□□ -2.04
YMR050CYMR050C HUT1Q12520 339 aa2.32□□□□□ -2.04
YMR050CYMR050C BNI1P41832 1953 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms