RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	HOM6	P31116	359 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	COX15	P40086	486 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	EFM5	P53200	248 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	SWT21	P53873	357 aa	Predicted RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	YPL039W	Q03080	316 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	RDS3	Q06835	107 aa	Predicted RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	NDE2	Q07500	545 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	HNT3	Q08702	217 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	ACF2	Q12168	779 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	USB1	Q12208	290 aa	Known RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	YGK3	Q12222	375 aa	Predicted RBP	0.95	□□□□□ -2.26
CLU1	YMR012W	CRC1	Q12289	327 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	YDL199C	Q12407	687 aa		0.95	□□□□□ -2.26
CLU1	YMR012W	SIP2	P34164	415 aa	Known RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	CPR5	P35176	225 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	ANR2	P36090	516 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	OPY1	P38271	328 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	TDA10	P42938	290 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	SSU72	P53538	206 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	PET191	Q02772	108 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	ATG34	Q12292	412 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	BRR1	Q99177	341 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	YER190C-B	P0CX94	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YEL077W-A	P0CX95	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YGR296C-B	P0CX96	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YPL283W-B	P0CX97	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YPR204C-A	P0CX98	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YFL068W	P0CX99	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YLL066W-A	P0CY00	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YLL067W-A	P0CY01	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	SNC1	P31109	117 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YEF1	P32622	495 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	PRX1	P34227	261 aa	Known RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	PMU1	P36069	295 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	SMP1	P38128	452 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	CYC2	P38909	366 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	PHM8	P40025	321 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	COG3	P40094	801 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	UTP18	P40362	594 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	INA22	P40576	216 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YGR201C	P42936	225 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	NUP57	P48837	541 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YGL118C	P53132	145 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	CAX4	P53223	239 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	RHO4	Q00246	291 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YPR127W	Q06494	345 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	TDA8	Q6B2U8	126 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	RNA15	P25299	296 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	YCR090C	P25654	182 aa	Known RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	BUB2	P26448	306 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	CAB3	P36076	571 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	DER1	P38307	211 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	SLM6	P38343	150 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	KRE9	P39005	276 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	COX14	P39103	70 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	RPR2	P40571	144 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	TPN1	P53099	579 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YGL034C	P53186	121 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	OKP1	P53298	406 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	KTR6	P54070	446 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	TPS1	Q00764	495 aa	Known RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	YDR278C	Q05612	105 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	YPR114W	Q06107	315 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	MHR1	Q06630	226 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	RRG7	Q08774	242 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	ATP16	Q12165	160 aa		0.94	□□□□□ -2.26
CLU1	YMR012W	RDL1	Q12305	139 aa	Known RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	SNU23	Q12368	194 aa	Predicted RBP	0.94	□□□□□ -2.26
CLU1	YMR012W	ATG22	P25568	528 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	URA10	P30402	227 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	VPS21	P36017	210 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	GGC1	P38988	300 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	YGL204C	P53089	101 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	COG7	P53195	279 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	COS1	P53822	381 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	DIG2	Q03373	323 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	LOT6	Q07923	191 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	YOR289W	Q12012	251 aa	Predicted RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	PIS1	P06197	220 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	CDC39	P25655	2108 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	PEX3	P28795	441 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	PHO89	P38361	574 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	SOP4	P39543	234 aa	Predicted RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	AVT2	P39981	480 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	GCN20	P43535	752 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	GET1	P53192	235 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	CLD1	P53264	445 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	RIM9	Q04734	239 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	RTT103	Q05543	409 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	IZH2	Q12442	317 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	RPS19A	P07280	144 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	RPS19B	P07281	144 aa	Predicted RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	YHR032W-A	P0C5N6	59 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	ARO2	P28777	376 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	CAM1	P29547	415 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	MRPL3	P36516	390 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	GDT1	P38301	280 aa	Predicted RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	IKI1	P38874	309 aa		0.93	□□□□□ -2.26
CLU1	YMR012W	AST2	P39945	430 aa	Known RBP	0.93	□□□□□ -2.26
CLU1	YMR012W	BXI1	P48558	297 aa		0.93	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 104.5 ms