RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YDR157W	A0A023PZE8	133 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	Q0255	P03881	472 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	SRY1	P36007	326 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	YAR068W	P39564	161 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	IRC18	P47056	224 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	YMD8	Q03697	442 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	NIP7	Q08962	181 aa	Known RBP	3.67	□□□□□ -1.82
RSA3	YLR221C	GET4	Q12125	312 aa		3.67	□□□□□ -1.82
RSA3	YLR221C	YRA1	Q12159	226 aa	Known RBP	3.67	□□□□□ -1.82
RSA3	YLR221C	CDC28	P00546	298 aa	Known RBP	3.66	□□□□□ -1.82
RSA3	YLR221C	YHL026C	P38740	315 aa		3.66	□□□□□ -1.82
RSA3	YLR221C	RPA43	P46669	326 aa		3.66	□□□□□ -1.82
RSA3	YLR221C	BXI1	P48558	297 aa		3.66	□□□□□ -1.82
RSA3	YLR221C	YGR026W	P53217	278 aa		3.66	□□□□□ -1.82
RSA3	YLR221C	CAB4	P53332	305 aa		3.66	□□□□□ -1.82
RSA3	YLR221C	FCY2	P17064	533 aa		3.65	□□□□□ -1.83
RSA3	YLR221C	TAF14	P35189	244 aa		3.65	□□□□□ -1.83
RSA3	YLR221C	IKI1	P38874	309 aa		3.65	□□□□□ -1.83
RSA3	YLR221C	RSM25	P40496	264 aa		3.65	□□□□□ -1.83
RSA3	YLR221C	MRPL49	P40858	161 aa	Predicted RBP	3.65	□□□□□ -1.83
RSA3	YLR221C	YDR248C	Q03786	193 aa		3.65	□□□□□ -1.83
RSA3	YLR221C	ATG39	Q06159	398 aa		3.65	□□□□□ -1.83
RSA3	YLR221C	DBF2	P22204	572 aa		3.64	□□□□□ -1.83
RSA3	YLR221C	SCM4	P32564	187 aa		3.64	□□□□□ -1.83
RSA3	YLR221C	FAR7	P43592	221 aa		3.64	□□□□□ -1.83
RSA3	YLR221C	PRM8	P53174	237 aa		3.64	□□□□□ -1.83
RSA3	YLR221C	YHR139C-A	O13536	103 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	HTB1	P02293	131 aa	Known RBP	3.63	□□□□□ -1.83
RSA3	YLR221C	HTB2	P02294	131 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	UTR5	P32630	166 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	CLB6	P32943	380 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	APS1	P35181	156 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	YBR063C	P38083	404 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	DIA1	P54005	336 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	RDS3	Q06835	107 aa	Predicted RBP	3.63	□□□□□ -1.83
RSA3	YLR221C	AKR2	Q12013	749 aa		3.63	□□□□□ -1.83
RSA3	YLR221C	YHR032W-A	P0C5N6	59 aa		3.62	□□□□□ -1.83
RSA3	YLR221C	MGM101	P32787	269 aa	Known RBP	3.62	□□□□□ -1.83
RSA3	YLR221C	ECM33	P38248	429 aa	Known RBP	3.62	□□□□□ -1.83
RSA3	YLR221C	DOG2	P38773	246 aa		3.62	□□□□□ -1.83
RSA3	YLR221C	DOG1	P38774	246 aa		3.62	□□□□□ -1.83
RSA3	YLR221C	PDR17	P53844	350 aa		3.62	□□□□□ -1.83
RSA3	YLR221C	MIX17	Q03667	156 aa		3.62	□□□□□ -1.83
RSA3	YLR221C	SUE1	Q06524	206 aa		3.62	□□□□□ -1.83
RSA3	YLR221C	MATALPHA2	P0CY08	210 aa		3.61	□□□□□ -1.83
RSA3	YLR221C	HMLALPHA2	P0CY09	210 aa		3.61	□□□□□ -1.83
RSA3	YLR221C	CBF1	P17106	351 aa		3.61	□□□□□ -1.83
RSA3	YLR221C	RFA3	P26755	122 aa	Known RBP	3.61	□□□□□ -1.83
RSA3	YLR221C	YJR146W	P47174	117 aa		3.61	□□□□□ -1.83
RSA3	YLR221C	DSK2	P48510	373 aa		3.61	□□□□□ -1.83
RSA3	YLR221C	FAB1	P34756	2278 aa		3.61	□□□□□ -1.83
RSA3	YLR221C	GCN3	P14741	305 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	OAC1	P32332	324 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	SNX4	P47057	423 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	GET1	P53192	235 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	SLM2	P53955	656 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	CDD1	Q06549	142 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	VPS68	Q12016	184 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	TUS1	Q06412	1307 aa		3.6	□□□□□ -1.83
RSA3	YLR221C	RPL9A	P05738	191 aa	Known RBP	3.59	□□□□□ -1.83
RSA3	YLR221C	VMA11	P32842	164 aa		3.59	□□□□□ -1.83
RSA3	YLR221C	YCR087C-A	P37263	153 aa		3.59	□□□□□ -1.83
RSA3	YLR221C	SMD3	P43321	101 aa	Known RBP	3.59	□□□□□ -1.83
RSA3	YLR221C	RPL9B	P51401	191 aa	Known RBP	3.59	□□□□□ -1.83
RSA3	YLR221C	COS6	P53344	381 aa		3.59	□□□□□ -1.83
RSA3	YLR221C	GIM3	P53900	129 aa		3.59	□□□□□ -1.83
RSA3	YLR221C	ABP140	Q08641	628 aa	Known RBP	3.59	□□□□□ -1.83
RSA3	YLR221C	MHT1	Q12525	324 aa		3.59	□□□□□ -1.83
RSA3	YLR221C	SCO1	P23833	295 aa		3.58	□□□□□ -1.84
RSA3	YLR221C	IRC22	P40006	225 aa		3.58	□□□□□ -1.84
RSA3	YLR221C	YNL010W	P53981	241 aa	Known RBP	3.58	□□□□□ -1.84
RSA3	YLR221C	LPP1	Q04396	274 aa		3.58	□□□□□ -1.84
RSA3	YLR221C	RPL27A	P0C2H6	136 aa	Known RBP	3.57	□□□□□ -1.84
RSA3	YLR221C	RPL27B	P0C2H7	136 aa	Known RBP	3.57	□□□□□ -1.84
RSA3	YLR221C	YPR170W-B	P0C5R9	85 aa		3.57	□□□□□ -1.84
RSA3	YLR221C	YPK2	P18961	677 aa		3.57	□□□□□ -1.84
RSA3	YLR221C	MED6	P38782	295 aa		3.57	□□□□□ -1.84
RSA3	YLR221C	TRM5	P38793	499 aa		3.57	□□□□□ -1.84
RSA3	YLR221C	CTR2	P38865	189 aa		3.57	□□□□□ -1.84
RSA3	YLR221C	BMT5	P40493	336 aa		3.57	□□□□□ -1.84
RSA3	YLR221C	ATG22	P25568	528 aa		3.56	□□□□□ -1.84
RSA3	YLR221C	PUT1	P09368	476 aa		3.55	□□□□□ -1.84
RSA3	YLR221C	GRX2	P17695	143 aa	Known RBP	3.55	□□□□□ -1.84
RSA3	YLR221C	SPS18	P32572	300 aa		3.55	□□□□□ -1.84
RSA3	YLR221C	TCA17	P32613	152 aa		3.55	□□□□□ -1.84
RSA3	YLR221C	YIL001W	P40560	513 aa		3.55	□□□□□ -1.84
RSA3	YLR221C	PRM15	Q03262	622 aa		3.55	□□□□□ -1.84
RSA3	YLR221C	EMC6	Q12431	108 aa		3.55	□□□□□ -1.84
RSA3	YLR221C	MSW1	P04803	379 aa		3.54	□□□□□ -1.84
RSA3	YLR221C	SEC4	P07560	215 aa	Known RBP	3.54	□□□□□ -1.84
RSA3	YLR221C	POP4	P38336	279 aa		3.54	□□□□□ -1.84
RSA3	YLR221C	CDC8	P00572	216 aa		3.53	□□□□□ -1.84
RSA3	YLR221C	RMD6	P39975	231 aa		3.53	□□□□□ -1.84
RSA3	YLR221C	NOP19	P53317	196 aa	Predicted RBP	3.53	□□□□□ -1.84
RSA3	YLR221C	ATG38	Q05789	226 aa	Known RBP	3.53	□□□□□ -1.84
RSA3	YLR221C	PSF1	Q12488	208 aa		3.53	□□□□□ -1.84
RSA3	YLR221C	YCL012C	Q8J0M4	134 aa		3.53	□□□□□ -1.84
RSA3	YLR221C	QCR7	P00128	127 aa		3.52	□□□□□ -1.85
RSA3	YLR221C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
RSA3	YLR221C	MNN5	P46982	586 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms