RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C RDI1Q12434 202 aa2.08□□□□□ -2.08
VPS13YLL040C HIS5P07172 385 aa2.08□□□□□ -2.08
VPS13YLL040C MRP20P32387 263 aa2.08□□□□□ -2.08
VPS13YLL040C YAR068WP39564 161 aa2.08□□□□□ -2.08
VPS13YLL040C YNL195CP40168 261 aa2.08□□□□□ -2.08
VPS13YLL040C FLX1P40464 311 aa2.08□□□□□ -2.08
VPS13YLL040C YIL086CP40503 102 aa2.08□□□□□ -2.08
VPS13YLL040C MRPS18P42847 217 aa2.08□□□□□ -2.08
VPS13YLL040C TDA6Q06466 467 aa2.08□□□□□ -2.08
VPS13YLL040C IRC19Q07843 230 aa2.08□□□□□ -2.08
VPS13YLL040C YDL007C-AQ2V2Q0 85 aa2.08□□□□□ -2.08
VPS13YLL040C RFA1P22336 621 aaKnown RBP2.08□□□□□ -2.08
VPS13YLL040C PRO1P32264 428 aa2.08□□□□□ -2.08
VPS13YLL040C PTC7P38797 343 aa2.08□□□□□ -2.08
VPS13YLL040C RPS26BP39939 119 aaKnown RBP2.08□□□□□ -2.08
VPS13YLL040C CIN5P40917 295 aa2.08□□□□□ -2.08
VPS13YLL040C RNH201P53942 307 aa2.08□□□□□ -2.08
VPS13YLL040C YFR010W-AP0C5N0 62 aa2.08□□□□□ -2.08
VPS13YLL040C ERG3P32353 365 aa2.08□□□□□ -2.08
VPS13YLL040C NSE4P43124 402 aa2.08□□□□□ -2.08
VPS13YLL040C YJL118WP47022 219 aa2.08□□□□□ -2.08
VPS13YLL040C PAU4P53427 120 aa2.08□□□□□ -2.08
VPS13YLL040C YDR387CQ04162 555 aa2.08□□□□□ -2.08
VPS13YLL040C YMR252CQ04814 134 aa2.08□□□□□ -2.08
VPS13YLL040C TIR4Q12218 487 aaPredicted RBP2.08□□□□□ -2.08
VPS13YLL040C PAA1Q12447 191 aaKnown RBP2.08□□□□□ -2.08
VPS13YLL040C PRE2P30656 287 aaKnown RBP2.08□□□□□ -2.08
VPS13YLL040C CBP4P37267 147 aa2.08□□□□□ -2.08
VPS13YLL040C BAT1P38891 393 aaKnown RBP2.08□□□□□ -2.08
VPS13YLL040C SDP1P40479 209 aa2.08□□□□□ -2.08
VPS13YLL040C ATP19P81451 68 aa2.08□□□□□ -2.08
VPS13YLL040C STP4Q07351 490 aa2.08□□□□□ -2.08
VPS13YLL040C OPI3P05375 206 aa2.08□□□□□ -2.08
VPS13YLL040C ERV1P27882 189 aa2.08□□□□□ -2.08
VPS13YLL040C SRY1P36007 326 aa2.08□□□□□ -2.08
VPS13YLL040C YKL075CP36083 450 aa2.08□□□□□ -2.08
VPS13YLL040C ARC40P38328 384 aaKnown RBP2.08□□□□□ -2.08
VPS13YLL040C IRC22P40006 225 aa2.08□□□□□ -2.08
VPS13YLL040C GLE2P40066 365 aa2.08□□□□□ -2.08
VPS13YLL040C NIS1P53939 407 aa2.08□□□□□ -2.08
VPS13YLL040C CDC26P14724 124 aa2.08□□□□□ -2.08
VPS13YLL040C DBF20P32328 564 aa2.08□□□□□ -2.08
VPS13YLL040C MEI5P32489 222 aa2.08□□□□□ -2.08
VPS13YLL040C ALK2P32789 676 aaPredicted RBP2.08□□□□□ -2.08
VPS13YLL040C PEX7P39108 375 aa2.08□□□□□ -2.08
VPS13YLL040C OYE3P41816 400 aaPredicted RBP2.08□□□□□ -2.08
VPS13YLL040C PRR2Q12310 699 aa2.08□□□□□ -2.08
VPS13YLL040C TDH3P00359 332 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
VPS13YLL040C RFC2P40348 353 aa2.08□□□□□ -2.08
VPS13YLL040C YIL029CP40538 142 aa2.08□□□□□ -2.08
VPS13YLL040C ATG27P46989 271 aa2.08□□□□□ -2.08
VPS13YLL040C COG7P53195 279 aa2.08□□□□□ -2.08
VPS13YLL040C AQR1P53943 586 aa2.08□□□□□ -2.08
VPS13YLL040C YDR444WQ04093 687 aa2.08□□□□□ -2.08
VPS13YLL040C YPT1P01123 206 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C PAU1P0CE88 120 aa2.07□□□□□ -2.08
VPS13YLL040C PAU14P0CE89 120 aa2.07□□□□□ -2.08
VPS13YLL040C PAU6P0CE90 120 aa2.07□□□□□ -2.08
VPS13YLL040C PAU18P0CE91 120 aa2.07□□□□□ -2.08
VPS13YLL040C PAU8P0CE92 120 aa2.07□□□□□ -2.08
VPS13YLL040C PAU11P0CE93 120 aa2.07□□□□□ -2.08
VPS13YLL040C PRE4P30657 266 aa2.07□□□□□ -2.08
VPS13YLL040C DUT1P33317 147 aa2.07□□□□□ -2.08
VPS13YLL040C PRS4P38063 326 aaPredicted RBP2.07□□□□□ -2.08
VPS13YLL040C PAU13P38725 120 aa2.07□□□□□ -2.08
VPS13YLL040C ELO1P39540 310 aa2.07□□□□□ -2.08
VPS13YLL040C MIC27P50945 234 aa2.07□□□□□ -2.08
VPS13YLL040C PKP2P53170 491 aa2.07□□□□□ -2.08
VPS13YLL040C APS2Q00381 147 aa2.07□□□□□ -2.08
VPS13YLL040C PAU10Q03050 120 aa2.07□□□□□ -2.08
VPS13YLL040C ATG10Q07879 167 aa2.07□□□□□ -2.08
VPS13YLL040C PAU20Q08322 120 aa2.07□□□□□ -2.08
VPS13YLL040C PAU9Q3E770 120 aa2.07□□□□□ -2.08
VPS13YLL040C MSW1P04803 379 aa2.07□□□□□ -2.08
VPS13YLL040C MSF1P08425 469 aa2.07□□□□□ -2.08
VPS13YLL040C YOX1P34161 385 aa2.07□□□□□ -2.08
VPS13YLL040C MTR2P34232 184 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C FMO1P38866 432 aa2.07□□□□□ -2.08
VPS13YLL040C YIL012WP40551 113 aa2.07□□□□□ -2.08
VPS13YLL040C OCA1P50946 238 aaPredicted RBP2.07□□□□□ -2.08
VPS13YLL040C CWC27Q02770 301 aa2.07□□□□□ -2.08
VPS13YLL040C EKI1Q03764 534 aa2.07□□□□□ -2.08
VPS13YLL040C MRX8Q05473 314 aa2.07□□□□□ -2.08
VPS13YLL040C SLF1Q12034 447 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C SLH1P53327 1967 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C TY1A-DR4O74302 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-LR4P0C2I8 440 aaKnown RBP2.07□□□□□ -2.08
VPS13YLL040C TY1A-AP0CX57 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-PR1P0CX58 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-DR5P0CX65 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-ER2P0CX66 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-GR3P0CX67 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-LR1P0CX68 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-MR2P0CX69 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-DR6P0CX70 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-ER1P0CX71 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-LR2P0CX72 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-PLP0CX73 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-JR1P0CX74 440 aa2.07□□□□□ -2.08
VPS13YLL040C TY1A-LR3P0CX75 440 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms