RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C SAC3P46674 1301 aa1.69□□□□□ -2.14
RPF2YKR081C MER1P16523 270 aa1.69□□□□□ -2.14
RPF2YKR081C FCY2P17064 533 aa1.69□□□□□ -2.14
RPF2YKR081C ECM33P38248 429 aaKnown RBP1.69□□□□□ -2.14
RPF2YKR081C SNZ1Q03148 297 aa1.69□□□□□ -2.14
RPF2YKR081C RSR1P13856 272 aa1.68□□□□□ -2.14
RPF2YKR081C YKL075CP36083 450 aa1.68□□□□□ -2.14
RPF2YKR081C RPL13BP40212 199 aaKnown RBP1.68□□□□□ -2.14
RPF2YKR081C YNL247WP53852 767 aaKnown RBP1.68□□□□□ -2.14
RPF2YKR081C SSQ1Q05931 657 aaPredicted RBP1.68□□□□□ -2.14
RPF2YKR081C MSA1Q08471 629 aa1.68□□□□□ -2.14
RPF2YKR081C RPL13AQ12690 199 aaPredicted RBP1.68□□□□□ -2.14
RPF2YKR081C CFT1Q06632 1357 aaKnown RBP1.68□□□□□ -2.14
RPF2YKR081C IKI3Q06706 1349 aaKnown RBP1.67□□□□□ -2.14
RPF2YKR081C RPL2AP0CX45 254 aaKnown RBP1.67□□□□□ -2.14
RPF2YKR081C RPL2BP0CX46 254 aaKnown RBP1.67□□□□□ -2.14
RPF2YKR081C RPB4P20433 221 aaPredicted RBP1.67□□□□□ -2.14
RPF2YKR081C RPS5P26783 225 aaKnown RBP1.67□□□□□ -2.14
RPF2YKR081C ASF2P32448 525 aaPredicted RBP1.67□□□□□ -2.14
RPF2YKR081C RIB7P33312 244 aa1.67□□□□□ -2.14
RPF2YKR081C YMR144WP40214 342 aaKnown RBP1.67□□□□□ -2.14
RPF2YKR081C RPL33BP41056 107 aaKnown RBP1.67□□□□□ -2.14
RPF2YKR081C CAT5P41735 233 aa1.67□□□□□ -2.14
RPF2YKR081C HOP2P53187 214 aa1.67□□□□□ -2.14
RPF2YKR081C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
RPF2YKR081C MSH5Q12175 901 aa1.67□□□□□ -2.14
RPF2YKR081C YPL229WQ99395 206 aa1.67□□□□□ -2.14
RPF2YKR081C FLO9P39712 1322 aa1.66□□□□□ -2.14
RPF2YKR081C MEI4P29467 408 aa1.66□□□□□ -2.14
RPF2YKR081C NUF2P33895 451 aa1.66□□□□□ -2.14
RPF2YKR081C ATG38Q05789 226 aaKnown RBP1.66□□□□□ -2.14
RPF2YKR081C KAP95Q06142 861 aaKnown RBP1.66□□□□□ -2.14
RPF2YKR081C CDC8P00572 216 aa1.65□□□□□ -2.15
RPF2YKR081C RPT5P33297 434 aaKnown RBP1.65□□□□□ -2.15
RPF2YKR081C UPS2P35200 230 aa1.65□□□□□ -2.15
RPF2YKR081C YBR063CP38083 404 aa1.65□□□□□ -2.15
RPF2YKR081C MAK5P38112 773 aaPredicted RBP1.65□□□□□ -2.15
RPF2YKR081C ERV29P53337 310 aa1.65□□□□□ -2.15
RPF2YKR081C ABF2Q02486 183 aa1.65□□□□□ -2.15
RPF2YKR081C BRX1Q08235 291 aaKnown RBP1.65□□□□□ -2.15
RPF2YKR081C ARG80P07249 177 aa1.64□□□□□ -2.15
RPF2YKR081C ECM4P36156 370 aa1.64□□□□□ -2.15
RPF2YKR081C ICE2P40499 491 aa1.64□□□□□ -2.15
RPF2YKR081C TIR3P40552 269 aa1.64□□□□□ -2.15
RPF2YKR081C BNA6P43619 295 aa1.64□□□□□ -2.15
RPF2YKR081C YML096WQ04489 525 aa1.64□□□□□ -2.15
RPF2YKR081C YOL107WQ12239 342 aa1.64□□□□□ -2.15
RPF2YKR081C YOR029WQ12243 111 aa1.64□□□□□ -2.15
RPF2YKR081C DNA2P38859 1522 aa1.64□□□□□ -2.15
RPF2YKR081C YHR139C-AO13536 103 aa1.63□□□□□ -2.15
RPF2YKR081C SEN2P16658 377 aa1.63□□□□□ -2.15
RPF2YKR081C EDC3P39998 551 aaKnown RBP1.63□□□□□ -2.15
RPF2YKR081C CWC21Q03375 135 aaKnown RBP1.63□□□□□ -2.15
RPF2YKR081C RIO1Q12196 484 aaKnown RBP1.63□□□□□ -2.15
RPF2YKR081C YLR126CQ12288 251 aa1.63□□□□□ -2.15
RPF2YKR081C ADF1Q2V2Q1 113 aa1.63□□□□□ -2.15
RPF2YKR081C TCP1P12612 559 aaKnown RBP1.62□□□□□ -2.15
RPF2YKR081C APA2P22108 325 aa1.62□□□□□ -2.15
RPF2YKR081C SRB4P32569 687 aa1.62□□□□□ -2.15
RPF2YKR081C BMH2P34730 273 aaKnown RBP1.62□□□□□ -2.15
RPF2YKR081C YKT6P36015 200 aaKnown RBP1.62□□□□□ -2.15
RPF2YKR081C RIB1P38066 345 aa1.62□□□□□ -2.15
RPF2YKR081C PGD1P40356 397 aa1.62□□□□□ -2.15
RPF2YKR081C HOC1P47124 396 aa1.62□□□□□ -2.15
RPF2YKR081C EFM5P53200 248 aaKnown RBP1.62□□□□□ -2.15
RPF2YKR081C JIP3O13555 125 aa1.61□□□□□ -2.15
RPF2YKR081C RPS24AP0CX31 135 aaKnown RBP1.61□□□□□ -2.15
RPF2YKR081C RPS24BP0CX32 135 aaKnown RBP1.61□□□□□ -2.15
RPF2YKR081C MGM101P32787 269 aaKnown RBP1.61□□□□□ -2.15
RPF2YKR081C YRB1P41920 201 aaKnown RBP1.61□□□□□ -2.15
RPF2YKR081C BOL2P53082 120 aa1.61□□□□□ -2.15
RPF2YKR081C ARO80Q04052 950 aa1.61□□□□□ -2.15
RPF2YKR081C RRT8Q08219 342 aa1.61□□□□□ -2.15
RPF2YKR081C ABP140Q08641 628 aaKnown RBP1.61□□□□□ -2.15
RPF2YKR081C SKI3P17883 1432 aaKnown RBP1.6□□□□□ -2.15
RPF2YKR081C GPA2P10823 449 aa1.6□□□□□ -2.15
RPF2YKR081C FZF1P32805 299 aa1.6□□□□□ -2.15
RPF2YKR081C MSN4P33749 630 aa1.6□□□□□ -2.15
RPF2YKR081C YER137CP40083 148 aaKnown RBP1.6□□□□□ -2.15
RPF2YKR081C NUP84P52891 726 aa1.6□□□□□ -2.15
RPF2YKR081C MRPL50P53724 139 aa1.6□□□□□ -2.15
RPF2YKR081C RRN5Q02983 363 aa1.6□□□□□ -2.15
RPF2YKR081C FUS2Q05670 677 aa1.6□□□□□ -2.15
RPF2YKR081C GIS3Q12418 502 aa1.6□□□□□ -2.15
RPF2YKR081C PSF1Q12488 208 aa1.6□□□□□ -2.15
RPF2YKR081C YKL068W-AQ3E826 78 aa1.6□□□□□ -2.15
RPF2YKR081C UBC6P33296 250 aaPredicted RBP1.59□□□□□ -2.15
RPF2YKR081C MTW1P39731 289 aa1.59□□□□□ -2.15
RPF2YKR081C YNL217WP40152 326 aa1.59□□□□□ -2.15
RPF2YKR081C APS3P47064 194 aa1.59□□□□□ -2.15
RPF2YKR081C YML108WQ03759 105 aa1.59□□□□□ -2.15
RPF2YKR081C KRE28Q04431 385 aa1.59□□□□□ -2.15
RPF2YKR081C PAM18Q07914 168 aa1.59□□□□□ -2.15
RPF2YKR081C SWR1Q05471 1514 aa1.59□□□□□ -2.16
RPF2YKR081C CDC36P06100 191 aaPredicted RBP1.58□□□□□ -2.16
RPF2YKR081C RPL27BP0C2H7 136 aaKnown RBP1.58□□□□□ -2.16
RPF2YKR081C SIP3P38717 1229 aa1.58□□□□□ -2.16
RPF2YKR081C RTC3P38804 111 aaPredicted RBP1.58□□□□□ -2.16
RPF2YKR081C AIF1P52923 378 aa1.58□□□□□ -2.16
RPF2YKR081C GIM3P53900 129 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms