RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	RDL2	Q08742	149 aa	Known RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	FCY22	Q12119	530 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	YDL211C	Q12121	372 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	NOT5	Q12514	560 aa	Predicted RBP	5.37	□□□□□ -1.55
TIF1	YKR059W	YNL162W-A	Q3E7A8	72 aa		5.37	□□□□□ -1.55
TIF1	YKR059W	RPL15A	P05748	204 aa	Known RBP	5.36	□□□□□ -1.55
TIF1	YKR059W	NAM2	P11325	894 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	SCO1	P23833	295 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	SEC17	P32602	292 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	YBR032W	P38223	100 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	COX15	P40086	486 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	COS1	P53822	381 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	YNL010W	P53981	241 aa	Known RBP	5.36	□□□□□ -1.55
TIF1	YKR059W	REX2	P54964	269 aa	Known RBP	5.36	□□□□□ -1.55
TIF1	YKR059W	SPO77	Q06134	477 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	THP3	Q12049	470 aa	Known RBP	5.36	□□□□□ -1.55
TIF1	YKR059W	AYT1	Q12226	474 aa		5.36	□□□□□ -1.55
TIF1	YKR059W	FOL3	Q12676	427 aa	Predicted RBP	5.36	□□□□□ -1.55
TIF1	YKR059W	BPH1	P25356	2167 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	RHO1	P06780	209 aa	Known RBP	5.35	□□□□□ -1.55
TIF1	YKR059W	YFL068W	P0CX99	160 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	YLL066W-A	P0CY00	160 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	YLL067W-A	P0CY01	160 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	DEP1	P31385	405 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	PRS2	P38620	318 aa	Known RBP	5.35	□□□□□ -1.55
TIF1	YKR059W	IDP2	P41939	412 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	CUS2	P53830	285 aa	Predicted RBP	5.35	□□□□□ -1.55
TIF1	YKR059W	VBA1	Q04301	562 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	FAR8	Q05040	523 aa		5.35	□□□□□ -1.55
TIF1	YKR059W	THP2	O13539	261 aa	Known RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	REP1	P03871	373 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	RPL23A	P0CX41	137 aa	Known RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	RPL23B	P0CX42	137 aa	Known RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	RPS18A	P0CX55	146 aa	Known RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	RPS18B	P0CX56	146 aa	Predicted RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	ZWF1	P11412	505 aa	Known RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	TFS1	P14306	219 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	MCH2	P36032	473 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	YBR137W	P38276	179 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	YJR012C	P47087	207 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	YLR036C	Q07986	203 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	MCP1	Q12106	302 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	YGK3	Q12222	375 aa	Predicted RBP	5.34	□□□□□ -1.55
TIF1	YKR059W	YKL018C-A	Q3E7A7	99 aa		5.34	□□□□□ -1.55
TIF1	YKR059W	YPK2	P18961	677 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	MRPL6	P32904	214 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	COG3	P40094	801 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	TDA1	Q03533	586 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	MRX9	Q07349	420 aa	Known RBP	5.33	□□□□□ -1.56
TIF1	YKR059W	YOL131W	Q08270	108 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	CSM4	Q08955	156 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	SNF8	Q12483	233 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	PRM4	Q12498	284 aa		5.33	□□□□□ -1.56
TIF1	YKR059W	RPL27A	P0C2H6	136 aa	Known RBP	5.32	□□□□□ -1.56
TIF1	YKR059W	RPL27B	P0C2H7	136 aa	Known RBP	5.32	□□□□□ -1.56
TIF1	YKR059W	MDH2	P22133	377 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	IFM1	P25038	676 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	RPS5	P26783	225 aa	Known RBP	5.32	□□□□□ -1.56
TIF1	YKR059W	YKL187C	P34231	750 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	ARC40	P38328	384 aa	Known RBP	5.32	□□□□□ -1.56
TIF1	YKR059W	ARN2	P38724	620 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	RPR2	P40571	144 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	YFL051C	P43552	160 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	UBC13	P52490	153 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	FRE8	Q12209	686 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	YDL180W	Q12301	547 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	RPN6	Q12377	434 aa		5.32	□□□□□ -1.56
TIF1	YKR059W	RPS1B	P23248	255 aa	Known RBP	5.31	□□□□□ -1.56
TIF1	YKR059W	FUN26	P31381	517 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	RIB1	P38066	345 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	MIC12	P38341	106 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	SOP4	P39543	234 aa	Predicted RBP	5.31	□□□□□ -1.56
TIF1	YKR059W	MOB2	P43563	287 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	CIN2	P46670	268 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	HAM1	P47119	197 aa	Known RBP	5.31	□□□□□ -1.56
TIF1	YKR059W	SNZ1	Q03148	297 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	YHC1	Q05900	231 aa	Known RBP	5.31	□□□□□ -1.56
TIF1	YKR059W	SFH1	Q06168	426 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	SNA4	Q07549	140 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	GEP5	Q12393	293 aa		5.31	□□□□□ -1.56
TIF1	YKR059W	TRP1	P00912	224 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	YBR121C-A	P0C5L4	52 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	MRS3	P10566	314 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	SPT4	P32914	102 aa	Predicted RBP	5.3	□□□□□ -1.56
TIF1	YKR059W	CUE2	P36075	443 aa	Known RBP	5.3	□□□□□ -1.56
TIF1	YKR059W	SDS24	P38314	527 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	MDM31	P38880	579 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	YNL208W	P40159	199 aa	Known RBP	5.3	□□□□□ -1.56
TIF1	YKR059W	YIL012W	P40551	113 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	YFR054C	P43622	192 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	SCW4	P53334	386 aa	Known RBP	5.3	□□□□□ -1.56
TIF1	YKR059W	INP1	Q03694	420 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	YPR147C	Q06522	304 aa	Known RBP	5.3	□□□□□ -1.56
TIF1	YKR059W	YDL199C	Q12407	687 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	MHF1	Q3E835	90 aa		5.3	□□□□□ -1.56
TIF1	YKR059W	POF1	P25576	258 aa		5.29	□□□□□ -1.56
TIF1	YKR059W	LDS1	P31379	325 aa		5.29	□□□□□ -1.56
TIF1	YKR059W	PDC2	P32896	925 aa		5.29	□□□□□ -1.56
TIF1	YKR059W	CBT1	P36038	271 aa	Predicted RBP	5.29	□□□□□ -1.56
TIF1	YKR059W	CUE1	P38428	203 aa		5.29	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms