RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W PRP24P49960 444 aaKnown RBP1.95□□□□□ -2.1
SNU114YKL173W SYF2P53277 215 aaPredicted RBP1.95□□□□□ -2.1
SNU114YKL173W CRH1P53301 507 aa1.95□□□□□ -2.1
SNU114YKL173W ABF2Q02486 183 aa1.95□□□□□ -2.1
SNU114YKL173W ELP3Q02908 557 aaKnown RBP1.95□□□□□ -2.1
SNU114YKL173W SDC1Q03323 175 aa1.95□□□□□ -2.1
SNU114YKL173W DPP1Q05521 289 aa1.95□□□□□ -2.1
SNU114YKL173W YLR036CQ07986 203 aa1.95□□□□□ -2.1
SNU114YKL173W YPR064WQ12492 139 aa1.95□□□□□ -2.1
SNU114YKL173W FOL3Q12676 427 aaPredicted RBP1.95□□□□□ -2.1
SNU114YKL173W RPO41P13433 1351 aaKnown RBP1.95□□□□□ -2.1
SNU114YKL173W PHO80P20052 293 aa1.94□□□□□ -2.1
SNU114YKL173W RPS1BP23248 255 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W GRE3P38715 327 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SNU114YKL173W TRM5P38793 499 aa1.94□□□□□ -2.1
SNU114YKL173W MDM31P38880 579 aa1.94□□□□□ -2.1
SNU114YKL173W RPL10P41805 221 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W MOB2P43563 287 aa1.94□□□□□ -2.1
SNU114YKL173W ADO1P47143 340 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W CCC1P47818 322 aa1.94□□□□□ -2.1
SNU114YKL173W YPS5P53057 165 aa1.94□□□□□ -2.1
SNU114YKL173W SWC4P53201 476 aa1.94□□□□□ -2.1
SNU114YKL173W HCH1P53834 153 aa1.94□□□□□ -2.1
SNU114YKL173W CRZ1P53968 678 aa1.94□□□□□ -2.1
SNU114YKL173W TIM8P57744 87 aa1.94□□□□□ -2.1
SNU114YKL173W TSA2Q04120 196 aa1.94□□□□□ -2.1
SNU114YKL173W LDB18Q07887 179 aa1.94□□□□□ -2.1
SNU114YKL173W COQ10Q08058 207 aa1.94□□□□□ -2.1
SNU114YKL173W YOR292CQ08743 309 aa1.94□□□□□ -2.1
SNU114YKL173W YLR050CQ12155 161 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W UTP10P42945 1769 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W TY4B-JP47024 1803 aa1.94□□□□□ -2.1
SNU114YKL173W NHP6AP11632 93 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W RPB5P20434 215 aa1.94□□□□□ -2.1
SNU114YKL173W SDS24P38314 527 aa1.94□□□□□ -2.1
SNU114YKL173W PRS3P38689 320 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W BAT1P38891 393 aaKnown RBP1.94□□□□□ -2.1
SNU114YKL173W PAN6P40459 309 aa1.94□□□□□ -2.1
SNU114YKL173W REE1P40893 198 aa1.94□□□□□ -2.1
SNU114YKL173W ALG13P53178 202 aa1.94□□□□□ -2.1
SNU114YKL173W ARL3Q02804 198 aa1.94□□□□□ -2.1
SNU114YKL173W YML096WQ04489 525 aa1.94□□□□□ -2.1
SNU114YKL173W GAS2Q06135 555 aa1.94□□□□□ -2.1
SNU114YKL173W RAX2Q12465 1220 aa1.94□□□□□ -2.1
SNU114YKL173W BI3Q9ZZW7 517 aa1.94□□□□□ -2.1
SNU114YKL173W SCL1P21243 252 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W MRPL20P22354 195 aaPredicted RBP1.93□□□□□ -2.1
SNU114YKL173W AEP1P32493 518 aa1.93□□□□□ -2.1
SNU114YKL173W YBR242WP38331 238 aa1.93□□□□□ -2.1
SNU114YKL173W YDR476CQ03362 224 aa1.93□□□□□ -2.1
SNU114YKL173W UTP15Q04305 513 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W YMR320WQ04897 101 aa1.93□□□□□ -2.1
SNU114YKL173W FRQ1Q06389 190 aa1.93□□□□□ -2.1
SNU114YKL173W YOR283WQ12040 230 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W YCT1Q12235 531 aa1.93□□□□□ -2.1
SNU114YKL173W YLR046CQ12253 270 aa1.93□□□□□ -2.1
SNU114YKL173W JLP1Q12358 412 aa1.93□□□□□ -2.1
SNU114YKL173W AGC1Q12482 902 aa1.93□□□□□ -2.1
SNU114YKL173W RNA15P25299 296 aaPredicted RBP1.93□□□□□ -2.1
SNU114YKL173W KTI12P34253 313 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W PRE6P40303 254 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W ADD37Q03233 198 aa1.93□□□□□ -2.1
SNU114YKL173W DML1Q03652 475 aa1.93□□□□□ -2.1
SNU114YKL173W GMC1Q04399 608 aa1.93□□□□□ -2.1
SNU114YKL173W ADK1P07170 222 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W MRP1P10662 321 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W ERD1P16151 362 aa1.93□□□□□ -2.1
SNU114YKL173W IDP1P21954 428 aaKnown RBP1.93□□□□□ -2.1
SNU114YKL173W YCR023CP25351 611 aa1.93□□□□□ -2.1
SNU114YKL173W INO2P26798 304 aa1.93□□□□□ -2.1
SNU114YKL173W JEN1P36035 616 aa1.93□□□□□ -2.1
SNU114YKL173W FRM2P37261 193 aa1.93□□□□□ -2.1
SNU114YKL173W SHE1P38200 338 aa1.93□□□□□ -2.1
SNU114YKL173W WSC4P38739 605 aa1.93□□□□□ -2.1
SNU114YKL173W NDT80P38830 627 aa1.93□□□□□ -2.1
SNU114YKL173W RGI1P40043 161 aaPredicted RBP1.93□□□□□ -2.1
SNU114YKL173W YER076CP40049 302 aa1.93□□□□□ -2.1
SNU114YKL173W YFH7P43591 353 aa1.93□□□□□ -2.1
SNU114YKL173W NUP57P48837 541 aa1.93□□□□□ -2.1
SNU114YKL173W TOS8P53147 276 aa1.93□□□□□ -2.1
SNU114YKL173W YGR015CP53208 328 aa1.93□□□□□ -2.1
SNU114YKL173W MPA43P53583 542 aaPredicted RBP1.93□□□□□ -2.1
SNU114YKL173W YMR010WQ03687 405 aa1.93□□□□□ -2.1
SNU114YKL173W TPO4Q12256 659 aa1.93□□□□□ -2.1
SNU114YKL173W IZH2Q12442 317 aa1.93□□□□□ -2.1
SNU114YKL173W YAL064W-BO13512 126 aa1.92□□□□□ -2.1
SNU114YKL173W BCY1P07278 416 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W RPS28BP0C0X0 67 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W CUP2P15315 225 aa1.92□□□□□ -2.1
SNU114YKL173W SPS18P32572 300 aa1.92□□□□□ -2.1
SNU114YKL173W CSG2P35206 410 aa1.92□□□□□ -2.1
SNU114YKL173W SRY1P36007 326 aa1.92□□□□□ -2.1
SNU114YKL173W MRPL28P36527 147 aa1.92□□□□□ -2.1
SNU114YKL173W HEK2P38199 381 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SNU114YKL173W FMP23P38231 175 aa1.92□□□□□ -2.1
SNU114YKL173W IPI1P38803 334 aaPredicted RBP1.92□□□□□ -2.1
SNU114YKL173W RBL2P48606 106 aaKnown RBP1.92□□□□□ -2.1
SNU114YKL173W MMS2P53152 137 aa1.92□□□□□ -2.1
SNU114YKL173W SDS23P53172 527 aa1.92□□□□□ -2.1
SNU114YKL173W HSK3P69852 69 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms