RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W YDR114CQ04597 100 aa3.16□□□□□ -1.9
YJR028WYJR028W BBP1Q12365 385 aa3.16□□□□□ -1.9
YJR028WYJR028W SEC4P07560 215 aaKnown RBP3.15□□□□□ -1.91
YJR028WYJR028W RPL27AP0C2H6 136 aaKnown RBP3.15□□□□□ -1.91
YJR028WYJR028W RPL27BP0C2H7 136 aaKnown RBP3.15□□□□□ -1.91
YJR028WYJR028W RSA4P25382 515 aaKnown RBP3.15□□□□□ -1.91
YJR028WYJR028W TCA17P32613 152 aa3.15□□□□□ -1.91
YJR028WYJR028W YCR087C-AP37263 153 aa3.15□□□□□ -1.91
YJR028WYJR028W SDH4P37298 181 aa3.15□□□□□ -1.91
YJR028WYJR028W TIF34P40217 347 aaKnown RBP3.15□□□□□ -1.91
YJR028WYJR028W YDR248CQ03786 193 aa3.15□□□□□ -1.91
YJR028WYJR028W GRH1Q04410 372 aaKnown RBP3.15□□□□□ -1.91
YJR028WYJR028W YPL257WQ08974 193 aa3.15□□□□□ -1.91
YJR028WYJR028W SMD3P43321 101 aaKnown RBP3.14□□□□□ -1.91
YJR028WYJR028W YJR056CP47115 236 aa3.14□□□□□ -1.91
YJR028WYJR028W YML096WQ04489 525 aa3.14□□□□□ -1.91
YJR028WYJR028W LSO2Q3E772 92 aaKnown RBP3.14□□□□□ -1.91
YJR028WYJR028W DSF1P0CX08 502 aa3.13□□□□□ -1.91
YJR028WYJR028W YNR073CP0CX09 502 aa3.13□□□□□ -1.91
YJR028WYJR028W GCN3P14741 305 aa3.13□□□□□ -1.91
YJR028WYJR028W SPS18P32572 300 aa3.13□□□□□ -1.91
YJR028WYJR028W APS1P35181 156 aa3.13□□□□□ -1.91
YJR028WYJR028W ECM33P38248 429 aaKnown RBP3.13□□□□□ -1.91
YJR028WYJR028W IRC22P40006 225 aa3.13□□□□□ -1.91
YJR028WYJR028W YJR141WP47172 347 aaPredicted RBP3.13□□□□□ -1.91
YJR028WYJR028W YGL088WP53151 121 aa3.13□□□□□ -1.91
YJR028WYJR028W ABF2Q02486 183 aa3.13□□□□□ -1.91
YJR028WYJR028W PET191Q02772 108 aa3.13□□□□□ -1.91
YJR028WYJR028W YMR279CQ03263 540 aa3.13□□□□□ -1.91
YJR028WYJR028W PEX12Q04370 399 aa3.13□□□□□ -1.91
YJR028WYJR028W PRM7Q12459 698 aa3.13□□□□□ -1.91
YJR028WYJR028W YOR020W-AQ3E824 90 aa3.13□□□□□ -1.91
YJR028WYJR028W RAD9P14737 1309 aa3.12□□□□□ -1.91
YJR028WYJR028W Q0255P03881 472 aa3.12□□□□□ -1.91
YJR028WYJR028W MER1P16523 270 aa3.12□□□□□ -1.91
YJR028WYJR028W YGP1P38616 354 aaKnown RBP3.12□□□□□ -1.91
YJR028WYJR028W GRE3P38715 327 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91not detected
YJR028WYJR028W YHR125WP38831 101 aa3.12□□□□□ -1.91
YJR028WYJR028W CTR2P38865 189 aa3.12□□□□□ -1.91
YJR028WYJR028W COG3P40094 801 aa3.12□□□□□ -1.91
YJR028WYJR028W YJL016WP47072 561 aa3.12□□□□□ -1.91
YJR028WYJR028W DRS2P39524 1355 aa3.11□□□□□ -1.91
YJR028WYJR028W MIG1P27705 504 aa3.11□□□□□ -1.91
YJR028WYJR028W ARC15P40518 154 aaRIP-Chip data3.11□□□□□ -1.91not detected
YJR028WYJR028W PRM8P53174 237 aa3.11□□□□□ -1.91
YJR028WYJR028W YNL010WP53981 241 aaKnown RBP3.11□□□□□ -1.91
YJR028WYJR028W YML108WQ03759 105 aa3.11□□□□□ -1.91
YJR028WYJR028W SAS5Q99314 248 aa3.11□□□□□ -1.91
YJR028WYJR028W MRPL28P36527 147 aa3.1□□□□□ -1.91
YJR028WYJR028W YBR063CP38083 404 aa3.1□□□□□ -1.91
YJR028WYJR028W DOG2P38773 246 aa3.1□□□□□ -1.91
YJR028WYJR028W DOG1P38774 246 aa3.1□□□□□ -1.91
YJR028WYJR028W RSM25P40496 264 aa3.1□□□□□ -1.91
YJR028WYJR028W FIS1P40515 155 aa3.1□□□□□ -1.91
YJR028WYJR028W YJL144WP47009 104 aa3.1□□□□□ -1.91
YJR028WYJR028W SSU72P53538 206 aaPredicted RBP3.1□□□□□ -1.91
YJR028WYJR028W RPL26AP05743 127 aaKnown RBP3.09□□□□□ -1.91
YJR028WYJR028W FCY2P17064 533 aa3.09□□□□□ -1.91
YJR028WYJR028W CCA1P21269 546 aa3.09□□□□□ -1.91
YJR028WYJR028W RPL26BP53221 127 aaKnown RBP3.09□□□□□ -1.91
YJR028WYJR028W FAB1P34756 2278 aa3.08□□□□□ -1.92
YJR028WYJR028W NOP1P15646 327 aaKnown RBP3.08□□□□□ -1.92
YJR028WYJR028W SCO1P23833 295 aa3.08□□□□□ -1.92
YJR028WYJR028W YGR050CP53231 118 aa3.08□□□□□ -1.92
YJR028WYJR028W LPP1Q04396 274 aa3.08□□□□□ -1.92
YJR028WYJR028W GGA1Q06336 557 aa3.08□□□□□ -1.92
YJR028WYJR028W GRX2P17695 143 aaKnown RBP3.07□□□□□ -1.92
YJR028WYJR028W YAR068WP39564 161 aa3.07□□□□□ -1.92
YJR028WYJR028W YER188WP40103 239 aa3.07□□□□□ -1.92
YJR028WYJR028W YJR146WP47174 117 aa3.07□□□□□ -1.92
YJR028WYJR028W ATG39Q06159 398 aa3.07□□□□□ -1.92
YJR028WYJR028W CDD1Q06549 142 aa3.07□□□□□ -1.92
YJR028WYJR028W PSF1Q12488 208 aa3.07□□□□□ -1.92
YJR028WYJR028W CDC7P06243 507 aa3.06□□□□□ -1.92
YJR028WYJR028W ADH3P07246 375 aaKnown RBP3.06□□□□□ -1.92
YJR028WYJR028W YHR032W-AP0C5N6 59 aa3.06□□□□□ -1.92
YJR028WYJR028W ATP7P30902 174 aa3.06□□□□□ -1.92
YJR028WYJR028W YKR032WP36127 104 aa3.06□□□□□ -1.92
YJR028WYJR028W TRM5P38793 499 aa3.06□□□□□ -1.92
YJR028WYJR028W MMS2P53152 137 aa3.06□□□□□ -1.92
YJR028WYJR028W LSM7P53905 115 aaKnown RBP3.06□□□□□ -1.92
YJR028WYJR028W APJ1P53940 528 aa3.06□□□□□ -1.92
YJR028WYJR028W YMD8Q03697 442 aa3.06□□□□□ -1.92
YJR028WYJR028W YNG1Q08465 219 aa3.06□□□□□ -1.92
YJR028WYJR028W CLP1Q08685 445 aaPredicted RBP3.06□□□□□ -1.92
YJR028WYJR028W RPL9AP05738 191 aaKnown RBP3.05□□□□□ -1.92
YJR028WYJR028W SCM4P32564 187 aa3.05□□□□□ -1.92
YJR028WYJR028W SEC17P32602 292 aa3.05□□□□□ -1.92
YJR028WYJR028W RPL9BP51401 191 aaKnown RBP3.05□□□□□ -1.92
YJR028WYJR028W DIA1P54005 336 aa3.05□□□□□ -1.92
YJR028WYJR028W HRT1Q08273 121 aa3.05□□□□□ -1.92
YJR028WYJR028W AKR2Q12013 749 aa3.05□□□□□ -1.92
YJR028WYJR028W USB1Q12208 290 aaKnown RBP3.05□□□□□ -1.92
YJR028WYJR028W TDA8Q6B2U8 126 aa3.05□□□□□ -1.92
YJR028WYJR028W REP2P03872 296 aa3.04□□□□□ -1.92
YJR028WYJR028W YPR170W-BP0C5R9 85 aa3.04□□□□□ -1.92
YJR028WYJR028W POP4P38336 279 aa3.04□□□□□ -1.92
YJR028WYJR028W YER034WP40022 185 aaKnown RBP3.04□□□□□ -1.92
YJR028WYJR028W MRPL49P40858 161 aaPredicted RBP3.04□□□□□ -1.92
YJR028WYJR028W YGR026WP53217 278 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms