RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W SPS18P32572 300 aa1.6□□□□□ -2.15
MSL1YIR009W CSG2P35206 410 aa1.6□□□□□ -2.15
MSL1YIR009W CAB3P36076 571 aa1.6□□□□□ -2.15
MSL1YIR009W DRE2P36152 348 aa1.6□□□□□ -2.15
MSL1YIR009W SSH1P38353 490 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W PRE6P40303 254 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W YJL028WP47062 111 aa1.6□□□□□ -2.15
MSL1YIR009W CPR7P47103 393 aa1.6□□□□□ -2.15
MSL1YIR009W NUP57P48837 541 aa1.6□□□□□ -2.15
MSL1YIR009W COQ5P49017 307 aa1.6□□□□□ -2.15
MSL1YIR009W YGL034CP53186 121 aa1.6□□□□□ -2.15
MSL1YIR009W NOP19P53317 196 aaPredicted RBP1.6□□□□□ -2.15
MSL1YIR009W ACT1P60010 375 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W OSH6Q02201 448 aa1.6□□□□□ -2.15
MSL1YIR009W SNZ1Q03148 297 aa1.6□□□□□ -2.15
MSL1YIR009W EMI1Q04406 187 aa1.6□□□□□ -2.15
MSL1YIR009W YMR114CQ04471 368 aaKnown RBP1.6□□□□□ -2.15
MSL1YIR009W SEI1Q06058 285 aa1.6□□□□□ -2.15
MSL1YIR009W ATG5Q12380 294 aa1.6□□□□□ -2.15
MSL1YIR009W PRM7Q12459 698 aa1.6□□□□□ -2.15
MSL1YIR009W YOL085CQ99345 113 aa1.6□□□□□ -2.15
MSL1YIR009W TUS1Q06412 1307 aa1.6□□□□□ -2.15
MSL1YIR009W IPP1P00817 287 aaKnown RBP1.59□□□□□ -2.15
MSL1YIR009W BCY1P07278 416 aaKnown RBP1.59□□□□□ -2.15
MSL1YIR009W CPT1P17898 393 aa1.59□□□□□ -2.15
MSL1YIR009W PRE7P23724 241 aaKnown RBP1.59□□□□□ -2.15
MSL1YIR009W VPH2P32341 215 aa1.59□□□□□ -2.15
MSL1YIR009W YKL075CP36083 450 aa1.59□□□□□ -2.15
MSL1YIR009W IKI1P38874 309 aa1.59□□□□□ -2.15
MSL1YIR009W YHB1P39676 399 aaKnown RBP1.59□□□□□ -2.15
MSL1YIR009W MIC26P50087 233 aa1.59□□□□□ -2.15
MSL1YIR009W MGA1P53050 456 aa1.59□□□□□ -2.15
MSL1YIR009W FLC3P53121 802 aa1.59□□□□□ -2.15
MSL1YIR009W MRH4P53166 561 aa1.59□□□□□ -2.15
MSL1YIR009W HOP2P53187 214 aa1.59□□□□□ -2.15
MSL1YIR009W GET1P53192 235 aa1.59□□□□□ -2.15
MSL1YIR009W FYV6P53913 173 aa1.59□□□□□ -2.15
MSL1YIR009W YDR124WQ04608 324 aa1.59□□□□□ -2.15
MSL1YIR009W MSA1Q08471 629 aa1.59□□□□□ -2.15
MSL1YIR009W SYC1Q08553 188 aaPredicted RBP1.59□□□□□ -2.15
MSL1YIR009W YOR186WQ08560 144 aa1.59□□□□□ -2.15
MSL1YIR009W GRE1Q08969 168 aa1.59□□□□□ -2.15
MSL1YIR009W GPM2Q12008 311 aa1.59□□□□□ -2.15
MSL1YIR009W PST1Q12355 444 aa1.59□□□□□ -2.15
MSL1YIR009W DCN1Q12395 269 aa1.59□□□□□ -2.15
MSL1YIR009W YEL009C-AA0A023PZF2 135 aa1.58□□□□□ -2.16
MSL1YIR009W CDC28P00546 298 aaKnown RBP1.58□□□□□ -2.16
MSL1YIR009W SNA3P14359 133 aa1.58□□□□□ -2.16
MSL1YIR009W YAK1P14680 807 aa1.58□□□□□ -2.16
MSL1YIR009W TRM5P38793 499 aa1.58□□□□□ -2.16
MSL1YIR009W BMT5P40493 336 aa1.58□□□□□ -2.16
MSL1YIR009W UFD1P53044 361 aa1.58□□□□□ -2.16
MSL1YIR009W RMR1P53060 241 aa1.58□□□□□ -2.16
MSL1YIR009W ALG9P53868 555 aaKnown RBP1.58□□□□□ -2.16
MSL1YIR009W SMD1Q02260 146 aaPredicted RBP1.58□□□□□ -2.16
MSL1YIR009W YDR222WQ04925 415 aa1.58□□□□□ -2.16
MSL1YIR009W FAR8Q05040 523 aa1.58□□□□□ -2.16
MSL1YIR009W TIM22Q12328 207 aa1.58□□□□□ -2.16
MSL1YIR009W IES3Q12345 250 aa1.58□□□□□ -2.16
MSL1YIR009W YBL112CQ3E7Y4 105 aa1.58□□□□□ -2.16
MSL1YIR009W YCL012CQ8J0M4 134 aa1.58□□□□□ -2.16
MSL1YIR009W COS2P0CX12 379 aa1.57□□□□□ -2.16
MSL1YIR009W COS3P0CX13 379 aa1.57□□□□□ -2.16
MSL1YIR009W CKA2P19454 339 aa1.57□□□□□ -2.16
MSL1YIR009W OAC1P32332 324 aa1.57□□□□□ -2.16
MSL1YIR009W PRX1P34227 261 aaKnown RBP1.57□□□□□ -2.16
MSL1YIR009W PRY2P36110 329 aa1.57□□□□□ -2.16
MSL1YIR009W MSA2P36157 363 aa1.57□□□□□ -2.16
MSL1YIR009W GRE3P38715 327 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
MSL1YIR009W YHI9P38765 294 aa1.57□□□□□ -2.16
MSL1YIR009W COS4P43542 379 aa1.57□□□□□ -2.16
MSL1YIR009W ECO1P43605 281 aa1.57□□□□□ -2.16
MSL1YIR009W MCM22P47167 239 aa1.57□□□□□ -2.16
MSL1YIR009W BXI1P48558 297 aa1.57□□□□□ -2.16
MSL1YIR009W MIG2P53035 382 aa1.57□□□□□ -2.16
MSL1YIR009W BRR6P53062 197 aa1.57□□□□□ -2.16
MSL1YIR009W TOS8P53147 276 aa1.57□□□□□ -2.16
MSL1YIR009W RSM27P53305 110 aa1.57□□□□□ -2.16
MSL1YIR009W YNL046WP53956 172 aa1.57□□□□□ -2.16
MSL1YIR009W ABP140Q08641 628 aaKnown RBP1.57□□□□□ -2.16
MSL1YIR009W YPL264CQ08980 353 aa1.57□□□□□ -2.16
MSL1YIR009W TPO4Q12256 659 aa1.57□□□□□ -2.16
MSL1YIR009W BBP1Q12365 385 aa1.57□□□□□ -2.16
MSL1YIR009W JIP3O13555 125 aa1.56□□□□□ -2.16
MSL1YIR009W QCR7P00128 127 aa1.56□□□□□ -2.16
MSL1YIR009W CUP2P15315 225 aa1.56□□□□□ -2.16
MSL1YIR009W SEC22P22214 214 aa1.56□□□□□ -2.16
MSL1YIR009W DPB2P24482 689 aaPredicted RBP1.56□□□□□ -2.16
MSL1YIR009W SFC1P33303 322 aa1.56□□□□□ -2.16
MSL1YIR009W AST1P35183 429 aa1.56□□□□□ -2.16
MSL1YIR009W SRY1P36007 326 aa1.56□□□□□ -2.16
MSL1YIR009W TRM7P38238 310 aaKnown RBP1.56□□□□□ -2.16
MSL1YIR009W SPL2P38839 148 aa1.56□□□□□ -2.16
MSL1YIR009W SEC72P39742 193 aaKnown RBP1.56□□□□□ -2.16
MSL1YIR009W YIL001WP40560 513 aa1.56□□□□□ -2.16
MSL1YIR009W CAT5P41735 233 aa1.56□□□□□ -2.16
MSL1YIR009W YJR149WP47177 404 aa1.56□□□□□ -2.16
MSL1YIR009W YGR067CP53243 804 aa1.56□□□□□ -2.16
MSL1YIR009W GTR2P53290 341 aa1.56□□□□□ -2.16
MSL1YIR009W YDR248CQ03786 193 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 99.3 ms