RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C NOC4Q06512 552 aaPredicted RBP2.59□□□□□ -2
NMD2YHR077C AKR2Q12013 749 aa2.59□□□□□ -2
NMD2YHR077C PRS5Q12265 496 aaKnown RBP2.59□□□□□ -2
NMD2YHR077C YBR255C-AQ3E776 120 aa2.59□□□□□ -2
NMD2YHR077C YLR365WQ7LIF2 110 aa2.59□□□□□ -2
NMD2YHR077C MRPL33P20084 86 aa2.58□□□□□ -2
NMD2YHR077C MAG1P22134 296 aaKnown RBP2.58□□□□□ -2
NMD2YHR077C OCH1P31755 480 aa2.58□□□□□ -2
NMD2YHR077C MRPS5P33759 307 aa2.58□□□□□ -2
NMD2YHR077C LNP1P38878 278 aa2.58□□□□□ -2
NMD2YHR077C UME6P39001 836 aa2.58□□□□□ -2
NMD2YHR077C AIR1P40507 360 aaKnown RBP2.58□□□□□ -2
NMD2YHR077C UFD1P53044 361 aa2.58□□□□□ -2
NMD2YHR077C NRK1P53915 240 aa2.58□□□□□ -2
NMD2YHR077C YPL039WQ03080 316 aa2.58□□□□□ -2
NMD2YHR077C FRE8Q12209 686 aa2.58□□□□□ -2
NMD2YHR077C YCT1Q12235 531 aa2.58□□□□□ -2
NMD2YHR077C MRP2P10663 115 aaPredicted RBP2.58□□□□□ -2
NMD2YHR077C NAM2P11325 894 aa2.58□□□□□ -2
NMD2YHR077C MNS1P32906 549 aa2.58□□□□□ -2
NMD2YHR077C DUG1P43616 481 aaKnown RBP2.58□□□□□ -2
NMD2YHR077C MRX5P47007 382 aa2.58□□□□□ -2
NMD2YHR077C PBP1P53297 722 aaKnown RBP2.58□□□□□ -2
NMD2YHR077C ACT1P60010 375 aaKnown RBP2.58□□□□□ -2
NMD2YHR077C SKO1Q02100 647 aa2.58□□□□□ -2
NMD2YHR077C YDR415CQ04033 374 aaPredicted RBP2.58□□□□□ -2
NMD2YHR077C YMR082CQ04276 118 aa2.58□□□□□ -2
NMD2YHR077C ERP4Q12450 207 aa2.58□□□□□ -2
NMD2YHR077C YOR192C-CQ3E736 78 aa2.58□□□□□ -2
NMD2YHR077C YPR108W-AQ3E7B3 70 aa2.58□□□□□ -2
NMD2YHR077C ISN1Q99312 450 aa2.58□□□□□ -2
NMD2YHR077C UBA3Q99344 299 aa2.58□□□□□ -2
NMD2YHR077C UBI4P0CG63 381 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C RPL40AP0CH08 128 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C RPL40BP0CH09 128 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C DEG1P31115 442 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C SWD3P38123 315 aa2.57□□□□□ -2
NMD2YHR077C REE1P40893 198 aa2.57□□□□□ -2
NMD2YHR077C ECO1P43605 281 aa2.57□□□□□ -2
NMD2YHR077C IKS1P47042 667 aa2.57□□□□□ -2
NMD2YHR077C YNR040WP53736 256 aa2.57□□□□□ -2
NMD2YHR077C SRP1Q02821 542 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C MDM30Q05930 598 aa2.57□□□□□ -2
NMD2YHR077C MRX9Q07349 420 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C WTM2Q12206 467 aa2.57□□□□□ -2
NMD2YHR077C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
NMD2YHR077C YOR032W-AQ8TGS1 66 aa2.57□□□□□ -2
NMD2YHR077C YHR214C-DP0CX93 97 aa2.57□□□□□ -2
NMD2YHR077C RPL30P14120 105 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C CDC26P14724 124 aa2.57□□□□□ -2
NMD2YHR077C APA2P22108 325 aa2.57□□□□□ -2
NMD2YHR077C ERG3P32353 365 aa2.57□□□□□ -2
NMD2YHR077C SDH8P38345 138 aa2.57□□□□□ -2
NMD2YHR077C SHO1P40073 367 aa2.57□□□□□ -2
NMD2YHR077C CCS1P40202 249 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C BNA1P47096 177 aa2.57□□□□□ -2
NMD2YHR077C ADO1P47143 340 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C AVT4P50944 713 aa2.57□□□□□ -2
NMD2YHR077C SKP1P52286 194 aa2.57□□□□□ -2
NMD2YHR077C TEX1P53851 422 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C MRP51Q02950 344 aa2.57□□□□□ -2
NMD2YHR077C DAL4Q04895 635 aa2.57□□□□□ -2
NMD2YHR077C ERP1Q05359 219 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C ATP16Q12165 160 aa2.57□□□□□ -2
NMD2YHR077C SAG1P20840 650 aa2.57□□□□□ -2
NMD2YHR077C ARC40P38328 384 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C SPC25P40014 221 aa2.57□□□□□ -2
NMD2YHR077C GPP1P41277 250 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C NIT2P47016 307 aa2.57□□□□□ -2
NMD2YHR077C MCM22P47167 239 aa2.57□□□□□ -2
NMD2YHR077C SSN8P47821 323 aa2.57□□□□□ -2
NMD2YHR077C YIP5P53108 310 aa2.57□□□□□ -2
NMD2YHR077C CWC25P53854 179 aaKnown RBP2.57□□□□□ -2
NMD2YHR077C YDR387CQ04162 555 aa2.57□□□□□ -2
NMD2YHR077C PCC1Q3E833 88 aa2.57□□□□□ -2
NMD2YHR077C HUG1Q6Q5K6 68 aa2.57□□□□□ -2
NMD2YHR077C MSW1P04803 379 aa2.56□□□□□ -2
NMD2YHR077C RPP1AP05318 106 aaPredicted RBP2.56□□□□□ -2
NMD2YHR077C RPS16AP0CX51 143 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C RPS16BP0CX52 143 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C KRR1P25586 316 aaPredicted RBP2.56□□□□□ -2
NMD2YHR077C RFA3P26755 122 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C FLO5P38894 1075 aa2.56□□□□□ -2
NMD2YHR077C IDP2P41939 412 aa2.56□□□□□ -2
NMD2YHR077C YJR012CP47087 207 aa2.56□□□□□ -2
NMD2YHR077C SMM1P53720 384 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C ERV25P54837 211 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C CAB5Q03941 241 aa2.56□□□□□ -2
NMD2YHR077C MIX14Q04341 121 aa2.56□□□□□ -2
NMD2YHR077C IZH2Q12442 317 aa2.56□□□□□ -2
NMD2YHR077C TMA17Q12513 150 aa2.56□□□□□ -2
NMD2YHR077C YPT1P01123 206 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C PRE9P23638 258 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C ERG8P24521 451 aa2.56□□□□□ -2
NMD2YHR077C AHT1P29589 182 aa2.56□□□□□ -2
NMD2YHR077C SRB6P32570 121 aa2.56□□□□□ -2
NMD2YHR077C GLC7P32598 312 aaKnown RBP2.56□□□□□ -2
NMD2YHR077C YBR013CP38215 129 aa2.56□□□□□ -2
NMD2YHR077C IKI1P38874 309 aa2.56□□□□□ -2
NMD2YHR077C YER084WP40057 128 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms