RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C COG3P40094 801 aa2.03□□□□□ -2.08
YFR054CYFR054C YJR056CP47115 236 aa2.03□□□□□ -2.08
YFR054CYFR054C TOS8P53147 276 aa2.03□□□□□ -2.08
YFR054CYFR054C PRM8P53174 237 aa2.03□□□□□ -2.08
YFR054CYFR054C YGR026WP53217 278 aa2.03□□□□□ -2.08
YFR054CYFR054C ERV29P53337 310 aa2.03□□□□□ -2.08
YFR054CYFR054C GIM3P53900 129 aa2.03□□□□□ -2.08
YFR054CYFR054C APJ1P53940 528 aa2.03□□□□□ -2.08
YFR054CYFR054C RSM10Q03201 203 aa2.03□□□□□ -2.08
YFR054CYFR054C YDR248CQ03786 193 aa2.03□□□□□ -2.08
YFR054CYFR054C CLP1Q08685 445 aaPredicted RBP2.03□□□□□ -2.08
YFR054CYFR054C Q0255P03881 472 aa2.02□□□□□ -2.09
YFR054CYFR054C CCA1P21269 546 aa2.02□□□□□ -2.09
YFR054CYFR054C DBF2P22204 572 aa2.02□□□□□ -2.09
YFR054CYFR054C VMA11P32842 164 aa2.02□□□□□ -2.09
YFR054CYFR054C SDH4P37298 181 aa2.02□□□□□ -2.09
YFR054CYFR054C YHL026CP38740 315 aa2.02□□□□□ -2.09
YFR054CYFR054C DOG2P38773 246 aa2.02□□□□□ -2.09
YFR054CYFR054C DOG1P38774 246 aa2.02□□□□□ -2.09
YFR054CYFR054C RPF1P38805 295 aaKnown RBP2.02□□□□□ -2.09
YFR054CYFR054C IKI1P38874 309 aa2.02□□□□□ -2.09
YFR054CYFR054C ATG39Q06159 398 aa2.02□□□□□ -2.09
YFR054CYFR054C NIP7Q08962 181 aaKnown RBP2.02□□□□□ -2.09
YFR054CYFR054C YPL229WQ99395 206 aa2.02□□□□□ -2.09
YFR054CYFR054C RPL26AP05743 127 aaKnown RBP2.01□□□□□ -2.09
YFR054CYFR054C RPL27AP0C2H6 136 aaKnown RBP2.01□□□□□ -2.09
YFR054CYFR054C RPL27BP0C2H7 136 aaKnown RBP2.01□□□□□ -2.09
YFR054CYFR054C GCN3P14741 305 aa2.01□□□□□ -2.09
YFR054CYFR054C APS1P35181 156 aa2.01□□□□□ -2.09
YFR054CYFR054C YBR063CP38083 404 aa2.01□□□□□ -2.09
YFR054CYFR054C FAR7P43592 221 aa2.01□□□□□ -2.09
YFR054CYFR054C DSK2P48510 373 aa2.01□□□□□ -2.09
YFR054CYFR054C GET1P53192 235 aa2.01□□□□□ -2.09
YFR054CYFR054C RPL26BP53221 127 aaKnown RBP2.01□□□□□ -2.09
YFR054CYFR054C SAC3P46674 1301 aa2□□□□□ -2.09
YFR054CYFR054C JIP3O13555 125 aa2□□□□□ -2.09
YFR054CYFR054C YHR032W-AP0C5N6 59 aa2□□□□□ -2.09
YFR054CYFR054C OAC1P32332 324 aa2□□□□□ -2.09
YFR054CYFR054C UTR5P32630 166 aa2□□□□□ -2.09
YFR054CYFR054C TAF14P35189 244 aa2□□□□□ -2.09
YFR054CYFR054C SRY1P36007 326 aa2□□□□□ -2.09
YFR054CYFR054C TRM5P38793 499 aa2□□□□□ -2.09
YFR054CYFR054C RSM25P40496 264 aa2□□□□□ -2.09
YFR054CYFR054C PDR17P53844 350 aa2□□□□□ -2.09
YFR054CYFR054C DID2P69771 204 aa2□□□□□ -2.09
YFR054CYFR054C SUE1Q06524 206 aa2□□□□□ -2.09
YFR054CYFR054C CDD1Q06549 142 aa2□□□□□ -2.09
YFR054CYFR054C RDS3Q06835 107 aaPredicted RBP2□□□□□ -2.09
YFR054CYFR054C HRT1Q08273 121 aa2□□□□□ -2.09
YFR054CYFR054C AKR2Q12013 749 aa2□□□□□ -2.09
YFR054CYFR054C MHT1Q12525 324 aa2□□□□□ -2.09
YFR054CYFR054C RPL9AP05738 191 aaKnown RBP1.99□□□□□ -2.09
YFR054CYFR054C YPR170W-BP0C5R9 85 aa1.99□□□□□ -2.09
YFR054CYFR054C YPK2P18961 677 aa1.99□□□□□ -2.09
YFR054CYFR054C RFA3P26755 122 aaKnown RBP1.99□□□□□ -2.09
YFR054CYFR054C SCM4P32564 187 aa1.99□□□□□ -2.09
YFR054CYFR054C YCR087C-AP37263 153 aa1.99□□□□□ -2.09
YFR054CYFR054C MRPL49P40858 161 aaPredicted RBP1.99□□□□□ -2.09
YFR054CYFR054C RPA43P46669 326 aa1.99□□□□□ -2.09
YFR054CYFR054C SNX4P47057 423 aa1.99□□□□□ -2.09
YFR054CYFR054C RPL9BP51401 191 aaKnown RBP1.99□□□□□ -2.09
YFR054CYFR054C SLM2P53955 656 aa1.99□□□□□ -2.09
YFR054CYFR054C DIA1P54005 336 aa1.99□□□□□ -2.09
YFR054CYFR054C MIX17Q03667 156 aa1.99□□□□□ -2.09
YFR054CYFR054C ABP140Q08641 628 aaKnown RBP1.99□□□□□ -2.09
YFR054CYFR054C MDM32Q12171 622 aa1.99□□□□□ -2.09
YFR054CYFR054C TUS1Q06412 1307 aa1.98□□□□□ -2.09
YFR054CYFR054C ATG22P25568 528 aa1.98□□□□□ -2.09
YFR054CYFR054C SPS18P32572 300 aa1.98□□□□□ -2.09
YFR054CYFR054C CLB6P32943 380 aa1.98□□□□□ -2.09
YFR054CYFR054C ECM33P38248 429 aaKnown RBP1.98□□□□□ -2.09
YFR054CYFR054C RMD6P39975 231 aa1.98□□□□□ -2.09
YFR054CYFR054C BMT5P40493 336 aa1.98□□□□□ -2.09
YFR054CYFR054C YIL001WP40560 513 aa1.98□□□□□ -2.09
YFR054CYFR054C PRM15Q03262 622 aa1.98□□□□□ -2.09
YFR054CYFR054C LPP1Q04396 274 aa1.98□□□□□ -2.09
YFR054CYFR054C ATG38Q05789 226 aaKnown RBP1.98□□□□□ -2.09
YFR054CYFR054C RAD9P14737 1309 aa1.97□□□□□ -2.09
YFR054CYFR054C FKS1P38631 1876 aaKnown RBP1.97□□□□□ -2.09
YFR054CYFR054C YHR139C-AO13536 103 aa1.97□□□□□ -2.09
YFR054CYFR054C RPL25P04456 142 aaKnown RBP1.97□□□□□ -2.09
YFR054CYFR054C PUT1P09368 476 aa1.97□□□□□ -2.09
YFR054CYFR054C SKG1P36169 355 aa1.97□□□□□ -2.09
YFR054CYFR054C AST2P39945 430 aaKnown RBP1.97□□□□□ -2.09
YFR054CYFR054C CAB4P53332 305 aa1.97□□□□□ -2.09
YFR054CYFR054C CDC8P00572 216 aa1.96□□□□□ -2.1
YFR054CYFR054C MSW1P04803 379 aa1.96□□□□□ -2.1
YFR054CYFR054C MER1P16523 270 aa1.96□□□□□ -2.1
YFR054CYFR054C POP4P38336 279 aa1.96□□□□□ -2.1
YFR054CYFR054C GRE3P38715 327 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
YFR054CYFR054C IRC22P40006 225 aa1.96□□□□□ -2.1
YFR054CYFR054C YRB2P40517 327 aa1.96□□□□□ -2.1
YFR054CYFR054C MNN5P46982 586 aa1.96□□□□□ -2.1
YFR054CYFR054C YJR146WP47174 117 aa1.96□□□□□ -2.1
YFR054CYFR054C NOP19P53317 196 aaPredicted RBP1.96□□□□□ -2.1
YFR054CYFR054C YNL010WP53981 241 aaKnown RBP1.96□□□□□ -2.1
YFR054CYFR054C SNZ1Q03148 297 aa1.96□□□□□ -2.1
YFR054CYFR054C VPS68Q12016 184 aa1.96□□□□□ -2.1
YFR054CYFR054C TDA8Q6B2U8 126 aa1.96□□□□□ -2.1
YFR054CYFR054C MED6P38782 295 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms