RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C RPL21BQ12672 160 aaKnown RBP0.98□□□□□ -2.25
SEC3YER008C YER078W-AQ3E7A2 54 aa0.98□□□□□ -2.25
SEC3YER008C YCL021W-AQ96VH3 125 aa0.98□□□□□ -2.25
SEC3YER008C CBS2P14905 389 aa0.98□□□□□ -2.25
SEC3YER008C TAH1P25638 111 aaPredicted RBP0.98□□□□□ -2.25
SEC3YER008C IMP1P28627 190 aa0.98□□□□□ -2.25
SEC3YER008C CPR5P35176 225 aa0.98□□□□□ -2.25
SEC3YER008C SFK1P35735 353 aa0.98□□□□□ -2.25
SEC3YER008C POP8P38208 133 aa0.98□□□□□ -2.25
SEC3YER008C CSH1P38287 376 aa0.98□□□□□ -2.25
SEC3YER008C TIM17P39515 158 aa0.98□□□□□ -2.25
SEC3YER008C AGE2P40529 298 aa0.98□□□□□ -2.25
SEC3YER008C YFH7P43591 353 aa0.98□□□□□ -2.25
SEC3YER008C ATG18P43601 500 aa0.98□□□□□ -2.25
SEC3YER008C YJR056CP47115 236 aa0.98□□□□□ -2.25
SEC3YER008C OST3P48439 350 aa0.98□□□□□ -2.25
SEC3YER008C ADD37Q03233 198 aa0.98□□□□□ -2.25
SEC3YER008C KRE28Q04431 385 aa0.98□□□□□ -2.25
SEC3YER008C FSH2Q05015 223 aa0.98□□□□□ -2.25
SEC3YER008C MHR1Q06630 226 aa0.98□□□□□ -2.25
SEC3YER008C YLR036CQ07986 203 aa0.98□□□□□ -2.25
SEC3YER008C YOR283WQ12040 230 aaKnown RBP0.98□□□□□ -2.25
SEC3YER008C RFM1Q12192 310 aa0.98□□□□□ -2.25
SEC3YER008C PCL9Q12477 304 aa0.98□□□□□ -2.25
SEC3YER008C TPI1P00942 248 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C MRS1P07266 363 aa0.97□□□□□ -2.25
SEC3YER008C CAB3P36076 571 aa0.97□□□□□ -2.25
SEC3YER008C YKL075CP36083 450 aa0.97□□□□□ -2.25
SEC3YER008C TRM7P38238 310 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C EGD2P38879 174 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C AST2P39945 430 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C FLC3P53121 802 aa0.97□□□□□ -2.25
SEC3YER008C HST4P53688 370 aa0.97□□□□□ -2.25
SEC3YER008C RMI1Q02685 241 aa0.97□□□□□ -2.25
SEC3YER008C MRX11Q03079 207 aa0.97□□□□□ -2.25
SEC3YER008C SPG4Q04438 115 aa0.97□□□□□ -2.25
SEC3YER008C SCW10Q04951 389 aa0.97□□□□□ -2.25
SEC3YER008C SEC10Q06245 871 aa0.97□□□□□ -2.25
SEC3YER008C CSM4Q08955 156 aa0.97□□□□□ -2.25
SEC3YER008C IZH2Q12442 317 aa0.97□□□□□ -2.25
SEC3YER008C PET54P10834 293 aa0.97□□□□□ -2.25
SEC3YER008C PTM1P32857 523 aa0.97□□□□□ -2.25
SEC3YER008C MRP21P38175 177 aa0.97□□□□□ -2.25
SEC3YER008C TRS20P38334 175 aa0.97□□□□□ -2.25
SEC3YER008C CUE1P38428 203 aa0.97□□□□□ -2.25
SEC3YER008C OXA1P39952 402 aa0.97□□□□□ -2.25
SEC3YER008C COX15P40086 486 aa0.97□□□□□ -2.25
SEC3YER008C NQM1P53228 333 aaPredicted RBP0.97□□□□□ -2.25
SEC3YER008C YNL247WP53852 767 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C YPR127WQ06494 345 aa0.97□□□□□ -2.25
SEC3YER008C RPN8Q08723 338 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C TPO4Q12256 659 aa0.97□□□□□ -2.25
SEC3YER008C NCB2Q92317 146 aa0.97□□□□□ -2.25
SEC3YER008C COS2P0CX12 379 aa0.97□□□□□ -2.25
SEC3YER008C COS3P0CX13 379 aa0.97□□□□□ -2.25
SEC3YER008C SDH3P33421 198 aa0.97□□□□□ -2.25
SEC3YER008C DER1P38307 211 aa0.97□□□□□ -2.25
SEC3YER008C COS4P43542 379 aa0.97□□□□□ -2.25
SEC3YER008C ERV29P53337 310 aa0.97□□□□□ -2.25
SEC3YER008C SSU72P53538 206 aaPredicted RBP0.97□□□□□ -2.25
SEC3YER008C YNL046WP53956 172 aa0.97□□□□□ -2.25
SEC3YER008C RPL21AQ02753 160 aaKnown RBP0.97□□□□□ -2.25
SEC3YER008C YMR181CQ03231 154 aa0.97□□□□□ -2.25
SEC3YER008C GAS3Q03655 524 aa0.97□□□□□ -2.25
SEC3YER008C RRP17Q04031 235 aaPredicted RBP0.97□□□□□ -2.25
SEC3YER008C FAR10Q06001 478 aa0.97□□□□□ -2.25
SEC3YER008C YDR018CQ12185 396 aa0.97□□□□□ -2.25
SEC3YER008C AGC1Q12482 902 aa0.97□□□□□ -2.25
SEC3YER008C YBL112CQ3E7Y4 105 aa0.97□□□□□ -2.25
SEC3YER008C YFR032C-BQ8TGU2 87 aa0.97□□□□□ -2.25
SEC3YER008C QCR2P07257 368 aa0.96□□□□□ -2.26
SEC3YER008C RPL4AP10664 362 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C ATR1P13090 542 aa0.96□□□□□ -2.26
SEC3YER008C IFM1P25038 676 aa0.96□□□□□ -2.26
SEC3YER008C RPB9P27999 122 aa0.96□□□□□ -2.26
SEC3YER008C DEP1P31385 405 aa0.96□□□□□ -2.26
SEC3YER008C ANR2P36090 516 aaPredicted RBP0.96□□□□□ -2.26
SEC3YER008C ECM33P38248 429 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C YJR111CP47148 283 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C BXI1P48558 297 aa0.96□□□□□ -2.26
SEC3YER008C RPL4BP49626 362 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C PDR17P53844 350 aa0.96□□□□□ -2.26
SEC3YER008C YNG1Q08465 219 aa0.96□□□□□ -2.26
SEC3YER008C NAG1Q8TGN9 163 aa0.96□□□□□ -2.26
SEC3YER008C YAL064W-BO13512 126 aa0.96□□□□□ -2.26
SEC3YER008C MSI1P13712 422 aa0.96□□□□□ -2.26
SEC3YER008C SCO1P23833 295 aa0.96□□□□□ -2.26
SEC3YER008C UBC8P28263 218 aa0.96□□□□□ -2.26
SEC3YER008C TPS2P31688 896 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C SWD3P38123 315 aa0.96□□□□□ -2.26
SEC3YER008C SMP1P38128 452 aa0.96□□□□□ -2.26
SEC3YER008C SSH1P38353 490 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C MIG3P39943 394 aa0.96□□□□□ -2.26
SEC3YER008C YRB1P41920 201 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C CWC25P53854 179 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C YML018CQ03730 393 aa0.96□□□□□ -2.26
SEC3YER008C YMR316C-AI2HB70 103 aa0.96□□□□□ -2.26
SEC3YER008C REP2P03872 296 aa0.96□□□□□ -2.26
SEC3YER008C RPS19AP07280 144 aaKnown RBP0.96□□□□□ -2.26
SEC3YER008C RPS19BP07281 144 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms