RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W NMA1Q06178 401 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W BER1Q06688 274 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W MRX9Q07349 420 aaKnown RBP2.14□□□□□ -2.07
SNX41YDR425W LDB18Q07887 179 aa2.14□□□□□ -2.07
SNX41YDR425W RRP42Q12277 265 aaPredicted RBP2.14□□□□□ -2.07
SNX41YDR425W TFC7Q12415 435 aa2.14□□□□□ -2.07
SNX41YDR425W PCL9Q12477 304 aa2.14□□□□□ -2.07
SNX41YDR425W YIL134C-AQ45U18 67 aa2.14□□□□□ -2.07
SNX41YDR425W YPR096CO13587 100 aa2.13□□□□□ -2.07
SNX41YDR425W RPL9AP05738 191 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W UBI4P0CG63 381 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W RPL40AP0CH08 128 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W RPL40BP0CH09 128 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W SEC59P20048 519 aa2.13□□□□□ -2.07
SNX41YDR425W EPT1P22140 391 aa2.13□□□□□ -2.07
SNX41YDR425W PPH21P23594 369 aa2.13□□□□□ -2.07
SNX41YDR425W RBK1P25332 333 aa2.13□□□□□ -2.07
SNX41YDR425W CPR4P25334 318 aa2.13□□□□□ -2.07
SNX41YDR425W RSA4P25382 515 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W IDH2P28241 369 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W CBP4P37267 147 aa2.13□□□□□ -2.07
SNX41YDR425W LDB7P38210 180 aa2.13□□□□□ -2.07
SNX41YDR425W ZTA1P38230 334 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W POP7P38291 140 aa2.13□□□□□ -2.07
SNX41YDR425W YHR177WP38867 453 aa2.13□□□□□ -2.07
SNX41YDR425W FLX1P40464 311 aa2.13□□□□□ -2.07
SNX41YDR425W YFL067WP43537 175 aa2.13□□□□□ -2.07
SNX41YDR425W YJR149WP47177 404 aa2.13□□□□□ -2.07
SNX41YDR425W RPL9BP51401 191 aaKnown RBP2.13□□□□□ -2.07
SNX41YDR425W MDM34P53083 459 aa2.13□□□□□ -2.07
SNX41YDR425W YGR042WP53227 271 aa2.13□□□□□ -2.07
SNX41YDR425W VHT1P53241 593 aa2.13□□□□□ -2.07
SNX41YDR425W PAU12P53343 120 aa2.13□□□□□ -2.07
SNX41YDR425W PGA1P53896 198 aa2.13□□□□□ -2.07
SNX41YDR425W CYT2Q00873 224 aa2.13□□□□□ -2.07
SNX41YDR425W OAZ1Q02803 292 aa2.13□□□□□ -2.07
SNX41YDR425W EST3Q03096 181 aa2.13□□□□□ -2.07
SNX41YDR425W FIT1Q04433 528 aa2.13□□□□□ -2.07
SNX41YDR425W AIM32Q04689 311 aa2.13□□□□□ -2.07
SNX41YDR425W YMR321CQ04898 105 aa2.13□□□□□ -2.07
SNX41YDR425W YPR127WQ06494 345 aa2.13□□□□□ -2.07
SNX41YDR425W NOC4Q06512 552 aaPredicted RBP2.13□□□□□ -2.07
SNX41YDR425W BTS1Q12051 335 aa2.13□□□□□ -2.07
SNX41YDR425W PST1Q12355 444 aa2.13□□□□□ -2.07
SNX41YDR425W FRE6Q12473 712 aa2.13□□□□□ -2.07
SNX41YDR425W YNR034W-AQ3E841 98 aa2.13□□□□□ -2.07
SNX41YDR425W YCL012CQ8J0M4 134 aa2.13□□□□□ -2.07
SNX41YDR425W FSH3Q99369 266 aa2.13□□□□□ -2.07
SNX41YDR425W KIN28P06242 306 aa2.12□□□□□ -2.07
SNX41YDR425W RIP1P08067 215 aa2.12□□□□□ -2.07
SNX41YDR425W MATALPHA1P0CY06 175 aa2.12□□□□□ -2.07
SNX41YDR425W HMLALPHA1P0CY07 175 aa2.12□□□□□ -2.07
SNX41YDR425W CKA1P15790 372 aa2.12□□□□□ -2.07
SNX41YDR425W ATP10P18496 279 aa2.12□□□□□ -2.07
SNX41YDR425W SCL1P21243 252 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W POT1P27796 417 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SNX41YDR425W EHD3P28817 500 aa2.12□□□□□ -2.07
SNX41YDR425W PAU2P32612 120 aa2.12□□□□□ -2.07
SNX41YDR425W YEF1P32622 495 aa2.12□□□□□ -2.07
SNX41YDR425W SHG1P38337 142 aa2.12□□□□□ -2.07
SNX41YDR425W RPS20P38701 121 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W MST28P39552 234 aa2.12□□□□□ -2.07
SNX41YDR425W GAT2P40209 560 aa2.12□□□□□ -2.07
SNX41YDR425W GLC8P41818 229 aa2.12□□□□□ -2.07
SNX41YDR425W UFE1P41834 346 aa2.12□□□□□ -2.07
SNX41YDR425W HXT14P42833 540 aa2.12□□□□□ -2.07
SNX41YDR425W YJR056CP47115 236 aa2.12□□□□□ -2.07
SNX41YDR425W ADO1P47143 340 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W NUP57P48837 541 aa2.12□□□□□ -2.07
SNX41YDR425W PRM1P53835 661 aa2.12□□□□□ -2.07
SNX41YDR425W YIF1P53845 314 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W YNL140CP53910 189 aa2.12□□□□□ -2.07
SNX41YDR425W SAE3P89114 91 aa2.12□□□□□ -2.07
SNX41YDR425W SKO1Q02100 647 aa2.12□□□□□ -2.07
SNX41YDR425W TRM44Q02648 567 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W CWC27Q02770 301 aa2.12□□□□□ -2.07
SNX41YDR425W YMR315WQ04869 349 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W RRT7Q07829 113 aa2.12□□□□□ -2.07
SNX41YDR425W YLR036CQ07986 203 aa2.12□□□□□ -2.07
SNX41YDR425W MMT2Q08970 484 aa2.12□□□□□ -2.07
SNX41YDR425W SRO7Q12038 1033 aa2.12□□□□□ -2.07
SNX41YDR425W REX3Q12090 404 aa2.12□□□□□ -2.07
SNX41YDR425W PER33Q12144 273 aa2.12□□□□□ -2.07
SNX41YDR425W FYV7Q12247 151 aa2.12□□□□□ -2.07
SNX41YDR425W PRM4Q12498 284 aa2.12□□□□□ -2.07
SNX41YDR425W TFB5Q3E7C1 72 aaPredicted RBP2.12□□□□□ -2.07
SNX41YDR425W SRN2Q99176 213 aa2.12□□□□□ -2.07
SNX41YDR425W MEX67Q99257 599 aaKnown RBP2.12□□□□□ -2.07
SNX41YDR425W RIF1P29539 1916 aa2.12□□□□□ -2.07
SNX41YDR425W MOT1P32333 1867 aa2.12□□□□□ -2.07
SNX41YDR425W HTB1P02293 131 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W HTB2P02294 131 aa2.11□□□□□ -2.07
SNX41YDR425W ADK1P07170 222 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W RPL31AP0C2H8 113 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W YAR066WP0CX18 203 aa2.11□□□□□ -2.07
SNX41YDR425W YHR214WP0CX19 203 aa2.11□□□□□ -2.07
SNX41YDR425W PET18P25362 215 aa2.11□□□□□ -2.07
SNX41YDR425W ERG24P32462 438 aaKnown RBP2.11□□□□□ -2.07
SNX41YDR425W TIP20P33891 701 aa2.11□□□□□ -2.07
SNX41YDR425W MRPL11P36521 249 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms