RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W RPL28P02406 149 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W RPS28BP0C0X0 67 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W UBI4P0CG63 381 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W GCN3P14741 305 aa1.32□□□□□ -2.2
SXM1YDR395W FCY2P17064 533 aa1.32□□□□□ -2.2
SXM1YDR395W SAM2P19358 384 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W MRPS28P21771 286 aa1.32□□□□□ -2.2
SXM1YDR395W LSB5P25369 354 aa1.32□□□□□ -2.2
SXM1YDR395W RPC19P28000 142 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W YEF1P32622 495 aa1.32□□□□□ -2.2
SXM1YDR395W PDC2P32896 925 aa1.32□□□□□ -2.2
SXM1YDR395W CSG2P35206 410 aa1.32□□□□□ -2.2
SXM1YDR395W PHD1P36093 366 aa1.32□□□□□ -2.2
SXM1YDR395W MRPL3P36516 390 aa1.32□□□□□ -2.2
SXM1YDR395W PHO88P38264 188 aaPredicted RBP1.32□□□□□ -2.2
SXM1YDR395W YPC1P38298 316 aa1.32□□□□□ -2.2
SXM1YDR395W NDT80P38830 627 aa1.32□□□□□ -2.2
SXM1YDR395W KRE29P40026 464 aa1.32□□□□□ -2.2
SXM1YDR395W YIL029CP40538 142 aa1.32□□□□□ -2.2
SXM1YDR395W GTR2P53290 341 aa1.32□□□□□ -2.2
SXM1YDR395W YNR048WP53740 393 aa1.32□□□□□ -2.2
SXM1YDR395W SLM2P53955 656 aa1.32□□□□□ -2.2
SXM1YDR395W DAD3P69850 94 aa1.32□□□□□ -2.2
SXM1YDR395W SAE3P89114 91 aa1.32□□□□□ -2.2
SXM1YDR395W YPL113CQ02961 396 aa1.32□□□□□ -2.2
SXM1YDR395W SDC1Q03323 175 aa1.32□□□□□ -2.2
SXM1YDR395W HPT1Q04178 221 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W TAZ1Q06510 381 aa1.32□□□□□ -2.2
SXM1YDR395W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
SXM1YDR395W YOR376WQ08900 122 aa1.32□□□□□ -2.2
SXM1YDR395W YLL056CQ12177 298 aa1.32□□□□□ -2.2
SXM1YDR395W YGK3Q12222 375 aaPredicted RBP1.32□□□□□ -2.2
SXM1YDR395W YDL199CQ12407 687 aa1.32□□□□□ -2.2
SXM1YDR395W PRM4Q12498 284 aa1.32□□□□□ -2.2
SXM1YDR395W RPS28AQ3E7X9 67 aaPredicted RBP1.32□□□□□ -2.2
SXM1YDR395W YAL064W-BO13512 126 aa1.32□□□□□ -2.2
SXM1YDR395W AMD1P15274 810 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W PCL1P24867 279 aa1.32□□□□□ -2.2
SXM1YDR395W YCR090CP25654 182 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W TFC1P32367 649 aa1.32□□□□□ -2.2
SXM1YDR395W APE2P32454 952 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W ZRT1P32804 376 aa1.32□□□□□ -2.2
SXM1YDR395W SUI1P32911 108 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W VMA7P39111 118 aa1.32□□□□□ -2.2
SXM1YDR395W RBG1P39729 369 aa1.32□□□□□ -2.2
SXM1YDR395W ISC1P40015 477 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W YIL060WP40519 144 aa1.32□□□□□ -2.2
SXM1YDR395W POP1P41812 875 aa1.32□□□□□ -2.2
SXM1YDR395W YJR012CP47087 207 aa1.32□□□□□ -2.2
SXM1YDR395W XPT1P47165 209 aa1.32□□□□□ -2.2
SXM1YDR395W ATP23P53722 227 aa1.32□□□□□ -2.2
SXM1YDR395W YNL234WP53857 426 aa1.32□□□□□ -2.2
SXM1YDR395W IDP3P53982 420 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W ACT1P60010 375 aaKnown RBP1.32□□□□□ -2.2
SXM1YDR395W HHT1P61830 136 aa1.32□□□□□ -2.2
SXM1YDR395W RSC9Q03124 581 aa1.32□□□□□ -2.2
SXM1YDR395W PFA5Q03289 374 aa1.32□□□□□ -2.2
SXM1YDR395W YDR209CQ03480 137 aa1.32□□□□□ -2.2
SXM1YDR395W SCS7Q03529 384 aa1.32□□□□□ -2.2
SXM1YDR395W YLR446WQ06204 433 aa1.32□□□□□ -2.2
SXM1YDR395W YPQ1Q12010 308 aa1.32□□□□□ -2.2
SXM1YDR395W POM33Q12164 279 aa1.32□□□□□ -2.2
SXM1YDR395W ERV2Q12284 196 aa1.32□□□□□ -2.2
SXM1YDR395W SNU23Q12368 194 aaPredicted RBP1.32□□□□□ -2.2
SXM1YDR395W NCA2Q12374 616 aa1.32□□□□□ -2.2
SXM1YDR395W ICT1Q12385 394 aa1.32□□□□□ -2.2
SXM1YDR395W YLR099W-AQ3E798 87 aa1.32□□□□□ -2.2
SXM1YDR395W CYC1P00044 109 aaPredicted RBP1.31□□□□□ -2.2
SXM1YDR395W RPL20AP0CX23 172 aaKnown RBP1.31□□□□□ -2.2
SXM1YDR395W RPL20BP0CX24 172 aaPredicted RBP1.31□□□□□ -2.2
SXM1YDR395W NSP1P14907 823 aaKnown RBP1.31□□□□□ -2.2
SXM1YDR395W ERD1P16151 362 aa1.31□□□□□ -2.2
SXM1YDR395W EPT1P22140 391 aa1.31□□□□□ -2.2
SXM1YDR395W SEC22P22214 214 aa1.31□□□□□ -2.2
SXM1YDR395W PRE7P23724 241 aaKnown RBP1.31□□□□□ -2.2
SXM1YDR395W RSA4P25382 515 aaKnown RBP1.31□□□□□ -2.2
SXM1YDR395W TAH1P25638 111 aaPredicted RBP1.31□□□□□ -2.2
SXM1YDR395W AHC2P25649 128 aa1.31□□□□□ -2.2
SXM1YDR395W CDC50P25656 391 aa1.31□□□□□ -2.2
SXM1YDR395W TIP1P27654 210 aaPredicted RBP1.31□□□□□ -2.2
SXM1YDR395W AIM26P32858 118 aa1.31□□□□□ -2.2
SXM1YDR395W SPT4P32914 102 aaPredicted RBP1.31□□□□□ -2.2
SXM1YDR395W SFK1P35735 353 aa1.31□□□□□ -2.2
SXM1YDR395W MOH1P38191 138 aa1.31□□□□□ -2.2
SXM1YDR395W SDS24P38314 527 aa1.31□□□□□ -2.2
SXM1YDR395W DOG1P38774 246 aa1.31□□□□□ -2.2
SXM1YDR395W TRR2P38816 342 aa1.31□□□□□ -2.2
SXM1YDR395W MST28P39552 234 aa1.31□□□□□ -2.2
SXM1YDR395W PEX22P39718 180 aa1.31□□□□□ -2.2
SXM1YDR395W AIM2P39721 246 aa1.31□□□□□ -2.2
SXM1YDR395W PDS1P40316 373 aaPredicted RBP1.31□□□□□ -2.2
SXM1YDR395W GLR1P41921 483 aaKnown RBP1.31□□□□□ -2.2
SXM1YDR395W EGT2P42835 1041 aa1.31□□□□□ -2.2
SXM1YDR395W YIP1P53039 248 aa1.31□□□□□ -2.2
SXM1YDR395W UFD1P53044 361 aa1.31□□□□□ -2.2
SXM1YDR395W YGR017WP53210 297 aa1.31□□□□□ -2.2
SXM1YDR395W YGR151CP53287 111 aa1.31□□□□□ -2.2
SXM1YDR395W ASI3P53983 676 aa1.31□□□□□ -2.2
SXM1YDR395W AAT1Q01802 451 aa1.31□□□□□ -2.2
SXM1YDR395W FMN1Q03778 218 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms