RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	YJL027C	P47063	138 aa	Predicted RBP	1.22	□□□□□ -2.21
SHE9	YDR393W	NBP35	P52920	328 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	MNT4	P53745	580 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	EBS1	Q03466	884 aa	Known RBP	1.22	□□□□□ -2.21
SHE9	YDR393W	YML096W	Q04489	525 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	CTR3	Q06686	241 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	BOL1	Q3E793	110 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	RAD50	P12753	1312 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.21	□□□□□ -2.21	not detected
SHE9	YDR393W	AVT2	P39981	480 aa		1.21	□□□□□ -2.21
SHE9	YDR393W	RPL10	P41805	221 aa	Known RBP	1.21	□□□□□ -2.21
SHE9	YDR393W	SWS2	P53937	143 aa		1.21	□□□□□ -2.21
SHE9	YDR393W	ASI3	P53983	676 aa		1.21	□□□□□ -2.21
SHE9	YDR393W	EGD1	Q02642	157 aa	Known RBP	1.21	□□□□□ -2.21
SHE9	YDR393W	MRPL23	Q12487	163 aa	Predicted RBP	1.21	□□□□□ -2.21
SHE9	YDR393W	FMP16	Q12497	93 aa		1.21	□□□□□ -2.21
SHE9	YDR393W	MHT1	Q12525	324 aa		1.21	□□□□□ -2.21
SHE9	YDR393W	RIF1	P29539	1916 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	CCA1	P21269	546 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	DOA4	P32571	926 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	YKL070W	P36087	169 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	OST2	P46964	130 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	SNX4	P47057	423 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	PGA2	P53903	129 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	CDC14	Q00684	551 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	SPP2	Q02521	185 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	PRM15	Q03262	622 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	ARV1	Q06541	321 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	GPM2	Q12008	311 aa		1.21	□□□□□ -2.22
SHE9	YDR393W	SME1	Q12330	94 aa	Predicted RBP	1.21	□□□□□ -2.22
SHE9	YDR393W	MET16	P18408	261 aa	Predicted RBP	1.2	□□□□□ -2.22
SHE9	YDR393W	DAL80	P26343	269 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	ECM13	P38195	257 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	SSH1	P38353	490 aa	Known RBP	1.2	□□□□□ -2.22
SHE9	YDR393W	PEX18	P38855	283 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	DSN1	P40568	576 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	PHB1	P40961	287 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	FMP33	P46998	180 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	EMC4	P53073	190 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	EMI1	Q04406	187 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	GMC2	Q06201	188 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	YOR097C	Q12274	175 aa	Predicted RBP	1.2	□□□□□ -2.22
SHE9	YDR393W	YBL008W-A	Q3E821	79 aa		1.2	□□□□□ -2.22
SHE9	YDR393W	HIS1	P00498	297 aa	Known RBP	1.19	□□□□□ -2.22
SHE9	YDR393W	TCP1	P12612	559 aa	Known RBP	1.19	□□□□□ -2.22
SHE9	YDR393W	DBP3	P20447	523 aa	Known RBP	1.19	□□□□□ -2.22
SHE9	YDR393W	RCN1	P36054	211 aa		1.19	□□□□□ -2.22
SHE9	YDR393W	ATG10	Q07879	167 aa		1.19	□□□□□ -2.22
SHE9	YDR393W	CDC39	P25655	2108 aa	Known RBP	1.19	□□□□□ -2.22
SHE9	YDR393W	SGA1	P08019	549 aa		1.18	□□□□□ -2.22
SHE9	YDR393W	COS8	P38723	381 aa		1.18	□□□□□ -2.22
SHE9	YDR393W	AYR1	P40471	297 aa		1.18	□□□□□ -2.22
SHE9	YDR393W	YJR012C	P47087	207 aa		1.18	□□□□□ -2.22
SHE9	YDR393W	RSM10	Q03201	203 aa		1.18	□□□□□ -2.22
SHE9	YDR393W	YPR011C	Q12251	326 aa		1.18	□□□□□ -2.22
SHE9	YDR393W	SSA3	P09435	649 aa	Known RBP	1.17	□□□□□ -2.22
SHE9	YDR393W	EBP2	P36049	427 aa	Known RBP	1.17	□□□□□ -2.22
SHE9	YDR393W	SIP3	P38717	1229 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	YHB1	P39676	399 aa	Known RBP	1.17	□□□□□ -2.22
SHE9	YDR393W	DDI1	P40087	428 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	RSM25	P40496	264 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	NUP84	P52891	726 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	KAP114	P53067	1004 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	MAL13	P53338	473 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	DAD3	P69850	94 aa		1.17	□□□□□ -2.22
SHE9	YDR393W	SPG3	Q04398	127 aa	Predicted RBP	1.17	□□□□□ -2.22
SHE9	YDR393W	SGE1	P33335	543 aa		1.16	□□□□□ -2.22
SHE9	YDR393W	URA8	P38627	578 aa	Predicted RBP	1.16	□□□□□ -2.22
SHE9	YDR393W	COA1	P40452	197 aa		1.16	□□□□□ -2.22
SHE9	YDR393W	ARC15	P40518	154 aa	RIP-Chip data	1.16	□□□□□ -2.22	not detected
SHE9	YDR393W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.16	□□□□□ -2.22	not detected
SHE9	YDR393W	YOL024W	Q08172	172 aa		1.16	□□□□□ -2.22
SHE9	YDR393W	BBP1	Q12365	385 aa		1.16	□□□□□ -2.22
SHE9	YDR393W	EMP46	Q12396	444 aa		1.16	□□□□□ -2.22
SHE9	YDR393W	YPL119C-A	Q3E751	87 aa		1.16	□□□□□ -2.22
SHE9	YDR393W	SEC22	P22214	214 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	PRS4	P38063	326 aa	Predicted RBP	1.15	□□□□□ -2.23
SHE9	YDR393W	YER189W	P40104	122 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	EMC2	P47133	292 aa	Known RBP	1.15	□□□□□ -2.23
SHE9	YDR393W	YGR026W	P53217	278 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	CTF19	Q02732	369 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	PIR1	Q03178	341 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	FUS2	Q05670	677 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	NKP2	Q06162	153 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	ABP140	Q08641	628 aa	Known RBP	1.15	□□□□□ -2.23
SHE9	YDR393W	YLR046C	Q12253	270 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	SNF8	Q12483	233 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	DYN1	P36022	4092 aa		1.15	□□□□□ -2.23
SHE9	YDR393W	Q0255	P03881	472 aa		1.14	□□□□□ -2.23
SHE9	YDR393W	RPL24A	P04449	155 aa	Known RBP	1.14	□□□□□ -2.23
SHE9	YDR393W	BCY1	P07278	416 aa	Known RBP	1.14	□□□□□ -2.23
SHE9	YDR393W	MRP1	P10662	321 aa	Known RBP	1.14	□□□□□ -2.23
SHE9	YDR393W	FBA1	P14540	359 aa	Known RBP	1.14	□□□□□ -2.23
SHE9	YDR393W	BMH2	P34730	273 aa	Known RBP	1.14	□□□□□ -2.23
SHE9	YDR393W	PEP8	P40335	379 aa		1.14	□□□□□ -2.23
SHE9	YDR393W	TRM9	P49957	279 aa		1.14	□□□□□ -2.23
SHE9	YDR393W	YMR279C	Q03263	540 aa		1.14	□□□□□ -2.23
SHE9	YDR393W	MZM1	Q03429	123 aa	Predicted RBP	1.14	□□□□□ -2.23
SHE9	YDR393W	OST6	Q03723	332 aa		1.14	□□□□□ -2.23
SHE9	YDR393W	YDR124W	Q04608	324 aa		1.14	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 130.5 ms