RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C ERV29P53337 310 aa2.91□□□□□ -1.94
LSM6YDR378C ATO3Q12359 275 aa2.91□□□□□ -1.94
LSM6YDR378C YBR121C-AP0C5L4 52 aa2.9□□□□□ -1.95
LSM6YDR378C CTR2P38865 189 aa2.9□□□□□ -1.95
LSM6YDR378C YIL001WP40560 513 aa2.9□□□□□ -1.95
LSM6YDR378C LSO2Q3E772 92 aaKnown RBP2.9□□□□□ -1.95
LSM6YDR378C SEY1Q99287 776 aa2.9□□□□□ -1.95
LSM6YDR378C DRS2P39524 1355 aa2.89□□□□□ -1.95
LSM6YDR378C RPL28P02406 149 aaKnown RBP2.89□□□□□ -1.95
LSM6YDR378C NRG2P38082 220 aa2.89□□□□□ -1.95
LSM6YDR378C ECM33P38248 429 aaKnown RBP2.89□□□□□ -1.95
LSM6YDR378C YRB1P41920 201 aaKnown RBP2.89□□□□□ -1.95
LSM6YDR378C TIM11P81449 96 aaPredicted RBP2.89□□□□□ -1.95
LSM6YDR378C YHR139C-AO13536 103 aa2.88□□□□□ -1.95
LSM6YDR378C MSW1P04803 379 aa2.88□□□□□ -1.95
LSM6YDR378C COQ1P18900 473 aa2.88□□□□□ -1.95
LSM6YDR378C URA8P38627 578 aaPredicted RBP2.88□□□□□ -1.95
LSM6YDR378C RSM25P40496 264 aa2.88□□□□□ -1.95
LSM6YDR378C BRR6P53062 197 aa2.88□□□□□ -1.95
LSM6YDR378C ALG13P53178 202 aa2.88□□□□□ -1.95
LSM6YDR378C YGR219WP53307 113 aa2.88□□□□□ -1.95
LSM6YDR378C NCB2Q92317 146 aa2.88□□□□□ -1.95
LSM6YDR378C STE18P18852 110 aa2.87□□□□□ -1.95
LSM6YDR378C DOG1P38774 246 aa2.87□□□□□ -1.95
LSM6YDR378C CIS3P47001 227 aa2.87□□□□□ -1.95
LSM6YDR378C NUP57P48837 541 aa2.87□□□□□ -1.95
LSM6YDR378C DID2P69771 204 aa2.87□□□□□ -1.95
LSM6YDR378C DAD3P69850 94 aa2.87□□□□□ -1.95
LSM6YDR378C DCN1Q12395 269 aa2.87□□□□□ -1.95
LSM6YDR378C NTG1P31378 399 aa2.86□□□□□ -1.95
LSM6YDR378C DOG2P38773 246 aa2.86□□□□□ -1.95
LSM6YDR378C RTC3P38804 111 aaPredicted RBP2.86□□□□□ -1.95
LSM6YDR378C ERG28P40030 148 aa2.86□□□□□ -1.95
LSM6YDR378C PGA2P53903 129 aa2.86□□□□□ -1.95
LSM6YDR378C YKL183C-AQ3E765 70 aa2.86□□□□□ -1.95
LSM6YDR378C CDC28P00546 298 aaKnown RBP2.85□□□□□ -1.95
LSM6YDR378C YPR170W-BP0C5R9 85 aa2.85□□□□□ -1.95
LSM6YDR378C GRX2P17695 143 aaKnown RBP2.85□□□□□ -1.95
LSM6YDR378C MDH3P32419 343 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
LSM6YDR378C SRY1P36007 326 aa2.85□□□□□ -1.95
LSM6YDR378C CBT1P36038 271 aaPredicted RBP2.85□□□□□ -1.95
LSM6YDR378C YJL027CP47063 138 aaPredicted RBP2.85□□□□□ -1.95
LSM6YDR378C RAD17P48581 401 aa2.85□□□□□ -1.95
LSM6YDR378C MRPS8Q03799 155 aa2.85□□□□□ -1.95
LSM6YDR378C NEJ1Q06148 342 aa2.85□□□□□ -1.95
LSM6YDR378C YHR086W-AQ3E746 53 aa2.85□□□□□ -1.95
LSM6YDR378C CDC8P00572 216 aa2.84□□□□□ -1.95
LSM6YDR378C FBA1P14540 359 aaKnown RBP2.84□□□□□ -1.95
LSM6YDR378C PEX4P29340 183 aa2.84□□□□□ -1.95
LSM6YDR378C PRP18P33411 251 aaPredicted RBP2.84□□□□□ -1.95
LSM6YDR378C BXI1P48558 297 aa2.84□□□□□ -1.95
LSM6YDR378C YDR248CQ03786 193 aa2.84□□□□□ -1.95
LSM6YDR378C ARR2Q06597 130 aa2.84□□□□□ -1.95
LSM6YDR378C JLP1Q12358 412 aa2.84□□□□□ -1.95
LSM6YDR378C FCY21P40039 528 aa2.83□□□□□ -1.96
LSM6YDR378C YNL194CP40169 301 aa2.83□□□□□ -1.96
LSM6YDR378C BNA7Q04066 261 aa2.83□□□□□ -1.96
LSM6YDR378C LPP1Q04396 274 aa2.83□□□□□ -1.96
LSM6YDR378C ARG80P07249 177 aa2.82□□□□□ -1.96
LSM6YDR378C DBF2P22204 572 aa2.82□□□□□ -1.96
LSM6YDR378C ATG22P25568 528 aa2.82□□□□□ -1.96
LSM6YDR378C OAC1P32332 324 aa2.82□□□□□ -1.96
LSM6YDR378C IRC22P40006 225 aa2.82□□□□□ -1.96
LSM6YDR378C FAR7P43592 221 aa2.82□□□□□ -1.96
LSM6YDR378C ADO1P47143 340 aaKnown RBP2.82□□□□□ -1.96
LSM6YDR378C PRM8P53174 237 aa2.82□□□□□ -1.96
LSM6YDR378C YNL010WP53981 241 aaKnown RBP2.82□□□□□ -1.96
LSM6YDR378C GIS3Q12418 502 aa2.82□□□□□ -1.96
LSM6YDR378C CDC33P07260 213 aaKnown RBP2.81□□□□□ -1.96
LSM6YDR378C RPB4P20433 221 aaPredicted RBP2.81□□□□□ -1.96
LSM6YDR378C SCL1P21243 252 aaKnown RBP2.81□□□□□ -1.96
LSM6YDR378C PHO88P38264 188 aaPredicted RBP2.81□□□□□ -1.96
LSM6YDR378C ERV15P38312 142 aa2.81□□□□□ -1.96
LSM6YDR378C ERG25P53045 309 aa2.81□□□□□ -1.96
LSM6YDR378C MGA1P53050 456 aa2.81□□□□□ -1.96
LSM6YDR378C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
LSM6YDR378C BOL1Q3E793 110 aa2.81□□□□□ -1.96
LSM6YDR378C YKE4P40544 346 aa2.8□□□□□ -1.96
LSM6YDR378C CWC21Q03375 135 aaKnown RBP2.8□□□□□ -1.96
LSM6YDR378C PSF1Q12488 208 aa2.8□□□□□ -1.96
LSM6YDR378C APS1P35181 156 aa2.79□□□□□ -1.96
LSM6YDR378C YHR180WP38868 163 aa2.79□□□□□ -1.96
LSM6YDR378C IRC18P47056 224 aa2.79□□□□□ -1.96
LSM6YDR378C SNZ1Q03148 297 aa2.79□□□□□ -1.96
LSM6YDR378C PRX1P34227 261 aaKnown RBP2.78□□□□□ -1.96
LSM6YDR378C POP4P38336 279 aa2.78□□□□□ -1.96
LSM6YDR378C USB1Q12208 290 aaKnown RBP2.78□□□□□ -1.96
LSM6YDR378C TDA8Q6B2U8 126 aa2.78□□□□□ -1.96
LSM6YDR378C YDR157WA0A023PZE8 133 aa2.77□□□□□ -1.97
LSM6YDR378C GCN3P14741 305 aa2.77□□□□□ -1.97
LSM6YDR378C SKG1P36169 355 aa2.77□□□□□ -1.97
LSM6YDR378C CWC23P52868 283 aaPredicted RBP2.77□□□□□ -1.97
LSM6YDR378C PDR17P53844 350 aa2.77□□□□□ -1.97
LSM6YDR378C TRM12Q04235 462 aa2.77□□□□□ -1.97
LSM6YDR378C REP2P03872 296 aa2.76□□□□□ -1.97
LSM6YDR378C CDC36P06100 191 aaPredicted RBP2.76□□□□□ -1.97
LSM6YDR378C YLR156WP0CE96 114 aa2.76□□□□□ -1.97
LSM6YDR378C YLR159WP0CE97 114 aa2.76□□□□□ -1.97
LSM6YDR378C YLR161WP0CE98 114 aa2.76□□□□□ -1.97
LSM6YDR378C IDH1P28834 360 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms