RNA–Protein interactions for RNA: YDR357C

CNL1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeast

Gene CNL1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CNL1	YDR357C	HYM1	P32464	399 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	TRS65	P32893	560 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	PRY2	P36110	329 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	YGP1	P38616	354 aa	Known RBP	4.09	□□□□□ -1.75
CNL1	YDR357C	COS8	P38723	381 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	TRR2	P38816	342 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	YEA4	P40004	342 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	AYR1	P40471	297 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	BUD13	P46947	266 aa	Predicted RBP	4.09	□□□□□ -1.75
CNL1	YDR357C	IKS1	P47042	667 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	AIM25	P47140	327 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	FLC3	P53121	802 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	ACT1	P60010	375 aa	Known RBP	4.09	□□□□□ -1.75
CNL1	YDR357C	YMR320W	Q04897	101 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	SHH4	Q06236	168 aa		4.09	□□□□□ -1.75
CNL1	YDR357C	CDC6	P09119	513 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	YKR104W	P0CE69	306 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	CAP2	P13517	287 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	YCR100C	P25606	316 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	KTI12	P34253	313 aa	Known RBP	4.08	□□□□□ -1.76
CNL1	YDR357C	SFK1	P35735	353 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
CNL1	YDR357C	YPT31	P38555	223 aa	Known RBP	4.08	□□□□□ -1.76
CNL1	YDR357C	ARN1	P38731	627 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	PEX22	P39718	180 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	TSC11	P40061	1430 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	YFL015C	P43578	164 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	UBC12	P52491	188 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	YGL101W	P53144	215 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	TOS8	P53147	276 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	ATP23	P53722	227 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	COF1	Q03048	143 aa	Known RBP	4.08	□□□□□ -1.76
CNL1	YDR357C	YMR206W	Q03695	313 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	GMC1	Q04399	608 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	ATG39	Q06159	398 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	FDH1	Q08911	376 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	PRM4	Q12498	284 aa		4.08	□□□□□ -1.76
CNL1	YDR357C	PDR10	P51533	1564 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	IPP1	P00817	287 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	RPL2A	P0CX45	254 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	RPL2B	P0CX46	254 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	SPS100	P13130	326 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	MSI1	P13712	422 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	RSA4	P25382	515 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	COQ3	P27680	312 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	YMC1	P32331	307 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	ERG24	P32462	438 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	LHP1	P33399	275 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	APS1	P35181	156 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	YBR220C	P38318	560 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	MED6	P38782	295 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	CHL4	P38907	458 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	APQ12	P40532	138 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	MIC19	P43594	170 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	MNN5	P46982	586 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	SOL1	P50278	321 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	ORC5	P50874	479 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	ARO8	P53090	500 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	HST4	P53688	370 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	ARK1	P53974	638 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	LGE1	Q02796	332 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	SCS7	Q03529	384 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	YML018C	Q03730	393 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	TSA2	Q04120	196 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	ERP1	Q05359	219 aa	Known RBP	4.07	□□□□□ -1.76
CNL1	YDR357C	YDL218W	Q07629	317 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	TIM18	Q08749	192 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	USO1	P25386	1790 aa		4.07	□□□□□ -1.76
CNL1	YDR357C	HAP2	P06774	265 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	PHO2	P07269	559 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	UBI4	P0CG63	381 aa	Known RBP	4.06	□□□□□ -1.76
CNL1	YDR357C	PHO85	P17157	305 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	YCR090C	P25654	182 aa	Known RBP	4.06	□□□□□ -1.76
CNL1	YDR357C	TIP1	P27654	210 aa	Predicted RBP	4.06	□□□□□ -1.76
CNL1	YDR357C	PHA2	P32452	334 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	TOD6	P34219	525 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	AIM2	P39721	246 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	OST2	P46964	130 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	BUL1	P48524	976 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	RPS12	P48589	143 aa	Known RBP	4.06	□□□□□ -1.76
CNL1	YDR357C	SDT1	P53078	280 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	SNO2	P53823	222 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	LSM7	P53905	115 aa	Known RBP	4.06	□□□□□ -1.76
CNL1	YDR357C	SUR7	P54003	302 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	TMA23	Q03525	211 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	YDR391C	Q04170	232 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	YLR224W	Q05947	369 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	DIC1	Q06143	298 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	YAP7	Q08182	245 aa		4.06	□□□□□ -1.76
CNL1	YDR357C	HTZ1	Q12692	134 aa	Known RBP	4.06	□□□□□ -1.76
CNL1	YDR357C	MHP1	P43638	1398 aa		4.05	□□□□□ -1.76
CNL1	YDR357C	RPO21	P04050	1733 aa	Known RBP	4.05	□□□□□ -1.76
CNL1	YDR357C	RPL7A	P05737	244 aa	Known RBP	4.05	□□□□□ -1.76
CNL1	YDR357C	MDM10	P18409	493 aa		4.05	□□□□□ -1.76
CNL1	YDR357C	PCL1	P24867	279 aa		4.05	□□□□□ -1.76
CNL1	YDR357C	ILV6	P25605	309 aa	Known RBP	4.05	□□□□□ -1.76
CNL1	YDR357C	PMU1	P36069	295 aa		4.05	□□□□□ -1.76
CNL1	YDR357C	NAT2	P37293	288 aa		4.05	□□□□□ -1.76
CNL1	YDR357C	POP8	P38208	133 aa		4.05	□□□□□ -1.76
CNL1	YDR357C	ARN2	P38724	620 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 88 ms