RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W PEX34P25584 144 aa4.81□□□□□ -1.64
FOB1YDR110W UTR4P32626 227 aa4.81□□□□□ -1.64
FOB1YDR110W PAN3P36102 679 aaPredicted RBP4.81□□□□□ -1.64
FOB1YDR110W KAE1P36132 386 aa4.81□□□□□ -1.64
FOB1YDR110W RPS20P38701 121 aaKnown RBP4.81□□□□□ -1.64
FOB1YDR110W CHL4P38907 458 aa4.81□□□□□ -1.64
FOB1YDR110W XBP1P40489 647 aa4.81□□□□□ -1.64
FOB1YDR110W RPS12P48589 143 aaKnown RBP4.81□□□□□ -1.64
FOB1YDR110W YIP1P53039 248 aa4.81□□□□□ -1.64
FOB1YDR110W TRM12Q04235 462 aa4.81□□□□□ -1.64
FOB1YDR110W RDL2Q08742 149 aaKnown RBP4.81□□□□□ -1.64
FOB1YDR110W ORT1Q12375 292 aa4.81□□□□□ -1.64
FOB1YDR110W TIR2P33890 251 aa4.8□□□□□ -1.64
FOB1YDR110W GVP36P40531 326 aaKnown RBP4.8□□□□□ -1.64
FOB1YDR110W PMT4P46971 762 aa4.8□□□□□ -1.64
FOB1YDR110W VHT1P53241 593 aa4.8□□□□□ -1.64
FOB1YDR110W SMM1P53720 384 aaKnown RBP4.8□□□□□ -1.64
FOB1YDR110W TMA23Q03525 211 aa4.8□□□□□ -1.64
FOB1YDR110W GMC1Q04399 608 aa4.8□□□□□ -1.64
FOB1YDR110W SEI1Q06058 285 aa4.8□□□□□ -1.64
FOB1YDR110W NKP2Q06162 153 aa4.8□□□□□ -1.64
FOB1YDR110W YLR012CQ07927 99 aa4.8□□□□□ -1.64
FOB1YDR110W YPL257WQ08974 193 aa4.8□□□□□ -1.64
FOB1YDR110W ERV2Q12284 196 aa4.8□□□□□ -1.64
FOB1YDR110W YPL229WQ99395 206 aa4.8□□□□□ -1.64
FOB1YDR110W YER145C-AA0A023PYF4 145 aa4.8□□□□□ -1.64
FOB1YDR110W UBI4P0CG63 381 aaKnown RBP4.8□□□□□ -1.64
FOB1YDR110W YMC1P32331 307 aa4.8□□□□□ -1.64
FOB1YDR110W MRPL15P36523 253 aa4.8□□□□□ -1.64
FOB1YDR110W MST28P39552 234 aa4.8□□□□□ -1.64
FOB1YDR110W FAU1P40099 211 aa4.8□□□□□ -1.64
FOB1YDR110W LSM8P47093 109 aaKnown RBP4.8□□□□□ -1.64
FOB1YDR110W FLC3P53121 802 aa4.8□□□□□ -1.64
FOB1YDR110W UTP15Q04305 513 aaKnown RBP4.8□□□□□ -1.64
FOB1YDR110W RFM1Q12192 310 aa4.8□□□□□ -1.64
FOB1YDR110W TY1A-NL1Q12391 440 aaKnown RBP4.8□□□□□ -1.64
FOB1YDR110W YPR064WQ12492 139 aa4.8□□□□□ -1.64
FOB1YDR110W POM152P39685 1337 aa4.79□□□□□ -1.64
FOB1YDR110W YBR056WP38081 501 aa4.79□□□□□ -1.64
FOB1YDR110W GPX2P38143 162 aa4.79□□□□□ -1.64
FOB1YDR110W YBR053CP38235 358 aa4.79□□□□□ -1.64
FOB1YDR110W PEX7P39108 375 aa4.79□□□□□ -1.64
FOB1YDR110W ERV46P39727 415 aa4.79□□□□□ -1.64
FOB1YDR110W AIM25P47140 327 aa4.79□□□□□ -1.64
FOB1YDR110W BXI1P48558 297 aa4.79□□□□□ -1.64
FOB1YDR110W LYS5P50113 272 aa4.79□□□□□ -1.64
FOB1YDR110W AVT4P50944 713 aa4.79□□□□□ -1.64
FOB1YDR110W CGI121Q03705 181 aaKnown RBP4.79□□□□□ -1.64
FOB1YDR110W DIC1Q06143 298 aa4.79□□□□□ -1.64
FOB1YDR110W CNL1Q06333 122 aa4.79□□□□□ -1.64
FOB1YDR110W MCH1Q07376 486 aa4.79□□□□□ -1.64
FOB1YDR110W YDL218WQ07629 317 aa4.79□□□□□ -1.64
FOB1YDR110W FRE8Q12209 686 aa4.79□□□□□ -1.64
FOB1YDR110W STE4P18851 423 aa4.78□□□□□ -1.64
FOB1YDR110W SEC59P20048 519 aa4.78□□□□□ -1.64
FOB1YDR110W CLB2P24869 491 aa4.78□□□□□ -1.64
FOB1YDR110W CTS1P29029 562 aa4.78□□□□□ -1.64
FOB1YDR110W ERG24P32462 438 aaKnown RBP4.78□□□□□ -1.64
FOB1YDR110W SIP2P34164 415 aaKnown RBP4.78□□□□□ -1.64
FOB1YDR110W SPL2P38839 148 aa4.78□□□□□ -1.64
FOB1YDR110W AYR1P40471 297 aa4.78□□□□□ -1.64
FOB1YDR110W STB1P42845 420 aa4.78□□□□□ -1.64
FOB1YDR110W EAF6P47128 113 aa4.78□□□□□ -1.64
FOB1YDR110W SCS7Q03529 384 aa4.78□□□□□ -1.64
FOB1YDR110W VHS1Q03785 461 aa4.78□□□□□ -1.64
FOB1YDR110W AIM36Q03798 255 aa4.78□□□□□ -1.64
FOB1YDR110W YMR027WQ04371 470 aa4.78□□□□□ -1.64
FOB1YDR110W LOA1Q06508 300 aa4.78□□□□□ -1.64
FOB1YDR110W PFA4Q12006 378 aa4.78□□□□□ -1.64
FOB1YDR110W ATP14Q12349 124 aa4.78□□□□□ -1.64
FOB1YDR110W ALG7P07286 448 aa4.77□□□□□ -1.65
FOB1YDR110W SPS100P13130 326 aa4.77□□□□□ -1.65
FOB1YDR110W AHC2P25649 128 aa4.77□□□□□ -1.65
FOB1YDR110W SAC1P32368 623 aaKnown RBP4.77□□□□□ -1.65
FOB1YDR110W SFC1P33303 322 aa4.77□□□□□ -1.65
FOB1YDR110W SHE2P36068 246 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
FOB1YDR110W SOL2P37262 315 aa4.77□□□□□ -1.65
FOB1YDR110W YBR062CP38239 180 aa4.77□□□□□ -1.65
FOB1YDR110W YEA4P40004 342 aa4.77□□□□□ -1.65
FOB1YDR110W CUZ1P53899 274 aa4.77□□□□□ -1.65
FOB1YDR110W SMX3P54999 86 aaPredicted RBP4.77□□□□□ -1.65
FOB1YDR110W SPR6Q01684 191 aa4.77□□□□□ -1.65
FOB1YDR110W LGE1Q02796 332 aaKnown RBP4.77□□□□□ -1.65
FOB1YDR110W TRS23Q03784 219 aa4.77□□□□□ -1.65
FOB1YDR110W FDH1Q08911 376 aa4.77□□□□□ -1.65
FOB1YDR110W STE7P06784 515 aa4.77□□□□□ -1.65
FOB1YDR110W SPO11P23179 398 aa4.77□□□□□ -1.65
FOB1YDR110W PCL1P24867 279 aa4.77□□□□□ -1.65
FOB1YDR110W PMU1P36069 295 aa4.77□□□□□ -1.65
FOB1YDR110W YPT31P38555 223 aaKnown RBP4.77□□□□□ -1.65
FOB1YDR110W YHK8P38776 514 aa4.77□□□□□ -1.65
FOB1YDR110W RPF1P38805 295 aaKnown RBP4.77□□□□□ -1.65
FOB1YDR110W YIL060WP40519 144 aa4.77□□□□□ -1.65
FOB1YDR110W NMA2P53204 395 aa4.77□□□□□ -1.65
FOB1YDR110W GTF1P53260 183 aaPredicted RBP4.77□□□□□ -1.65
FOB1YDR110W YGR219WP53307 113 aa4.77□□□□□ -1.65
FOB1YDR110W ATP23P53722 227 aa4.77□□□□□ -1.65
FOB1YDR110W COF1Q03048 143 aaKnown RBP4.77□□□□□ -1.65
FOB1YDR110W SCP1Q08873 200 aa4.77□□□□□ -1.65
FOB1YDR110W MCT1Q12283 360 aa4.77□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms