RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeastyeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCR001WYCR001W SSQ1Q05931 657 aaPredicted RBP0.77□□□□□ -2.29
YCR001WYCR001W BTS1Q12051 335 aa0.77□□□□□ -2.29
YCR001WYCR001W YPL229WQ99395 206 aa0.77□□□□□ -2.29
YCR001WYCR001W MSF1P08425 469 aa0.76□□□□□ -2.29
YCR001WYCR001W RPL27BP0C2H7 136 aaKnown RBP0.76□□□□□ -2.29
YCR001WYCR001W YNL217WP40152 326 aa0.76□□□□□ -2.29
YCR001WYCR001W YMR144WP40214 342 aaKnown RBP0.76□□□□□ -2.29
YCR001WYCR001W PGD1P40356 397 aa0.76□□□□□ -2.29
YCR001WYCR001W MPA43P53583 542 aaPredicted RBP0.76□□□□□ -2.29
YCR001WYCR001W MPP6P53725 186 aaPredicted RBP0.76□□□□□ -2.29
YCR001WYCR001W SPG3Q04398 127 aaPredicted RBP0.76□□□□□ -2.29
YCR001WYCR001W YML096WQ04489 525 aa0.76□□□□□ -2.29
YCR001WYCR001W OM45P16547 393 aa0.75□□□□□ -2.29
YCR001WYCR001W TMA19P35691 167 aaKnown RBP0.75□□□□□ -2.29
YCR001WYCR001W YKL075CP36083 450 aa0.75□□□□□ -2.29
YCR001WYCR001W GPI8P49018 411 aa0.75□□□□□ -2.29
YCR001WYCR001W AIF1P52923 378 aa0.75□□□□□ -2.29
YCR001WYCR001W ABF2Q02486 183 aa0.75□□□□□ -2.29
YCR001WYCR001W YPL162CQ12042 273 aa0.75□□□□□ -2.29
YCR001WYCR001W TRM12Q04235 462 aa0.74□□□□□ -2.29
YCR001WYCR001W MSH5Q12175 901 aa0.74□□□□□ -2.29
YCR001WYCR001W YLR126CQ12288 251 aa0.74□□□□□ -2.29
YCR001WYCR001W PSF1Q12488 208 aa0.74□□□□□ -2.29
YCR001WYCR001W YHR139C-AO13536 103 aa0.73□□□□□ -2.29
YCR001WYCR001W RIB1P38066 345 aa0.73□□□□□ -2.29
YCR001WYCR001W GAA1P39012 614 aa0.73□□□□□ -2.29
YCR001WYCR001W YRB2P40517 327 aa0.73□□□□□ -2.29
YCR001WYCR001W RPL37AP49166 88 aaKnown RBP0.73□□□□□ -2.29
YCR001WYCR001W UBC7Q02159 165 aa0.73□□□□□ -2.29
YCR001WYCR001W ANT1Q06497 328 aa0.73□□□□□ -2.29
YCR001WYCR001W MET5P47169 1442 aa0.72□□□□□ -2.29
YCR001WYCR001W YPR170W-BP0C5R9 85 aa0.72□□□□□ -2.29
YCR001WYCR001W VPS21P36017 210 aaKnown RBP0.72□□□□□ -2.29
YCR001WYCR001W YER076CP40049 302 aa0.72□□□□□ -2.29
YCR001WYCR001W YOR029WQ12243 111 aa0.72□□□□□ -2.29
YCR001WYCR001W TCP1P12612 559 aaKnown RBP0.71□□□□□ -2.3
YCR001WYCR001W SAY1P53324 424 aa0.71□□□□□ -2.3
YCR001WYCR001W YMD8Q03697 442 aa0.71□□□□□ -2.3
YCR001WYCR001W REP2P03872 296 aa0.7□□□□□ -2.3
YCR001WYCR001W MRPS28P21771 286 aa0.7□□□□□ -2.3
YCR001WYCR001W YET1P35723 206 aa0.7□□□□□ -2.3
YCR001WYCR001W HOC1P47124 396 aa0.7□□□□□ -2.3
YCR001WYCR001W DOC1P53068 250 aa0.7□□□□□ -2.3
YCR001WYCR001W YNR077CP53758 84 aa0.7□□□□□ -2.3
YCR001WYCR001W YNL010WP53981 241 aaKnown RBP0.7□□□□□ -2.3
YCR001WYCR001W YOL107WQ12239 342 aa0.7□□□□□ -2.3
YCR001WYCR001W MSB2P32334 1306 aa0.69□□□□□ -2.3
YCR001WYCR001W PDR18P53756 1333 aa0.69□□□□□ -2.3
YCR001WYCR001W IRC22P40006 225 aa0.69□□□□□ -2.3
YCR001WYCR001W RTT105P40063 208 aa0.69□□□□□ -2.3
YCR001WYCR001W PEX17P40155 199 aa0.69□□□□□ -2.3
YCR001WYCR001W RIO2P40160 425 aaKnown RBP0.69□□□□□ -2.3
YCR001WYCR001W KAP95Q06142 861 aaKnown RBP0.69□□□□□ -2.3
YCR001WYCR001W SRB4P32569 687 aa0.68□□□□□ -2.3
YCR001WYCR001W KDX1P36005 433 aa0.68□□□□□ -2.3
YCR001WYCR001W TVP38P36164 337 aa0.68□□□□□ -2.3
YCR001WYCR001W URA8P38627 578 aaPredicted RBP0.68□□□□□ -2.3
YCR001WYCR001W ERJ5P43613 295 aaPredicted RBP0.68□□□□□ -2.3
YCR001WYCR001W YJR149WP47177 404 aa0.68□□□□□ -2.3
YCR001WYCR001W DID2P69771 204 aa0.68□□□□□ -2.3
YCR001WYCR001W YML108WQ03759 105 aa0.68□□□□□ -2.3
YCR001WYCR001W LPP1Q04396 274 aa0.68□□□□□ -2.3
YCR001WYCR001W YER188C-AP0C0V2 99 aa0.67□□□□□ -2.3
YCR001WYCR001W TFC1P32367 649 aa0.67□□□□□ -2.3
YCR001WYCR001W UMP1P38293 148 aa0.67□□□□□ -2.3
YCR001WYCR001W DOG2P38773 246 aa0.67□□□□□ -2.3
YCR001WYCR001W MCM22P47167 239 aa0.67□□□□□ -2.3
YCR001WYCR001W NOP13P53883 403 aaKnown RBP RIP-Chip data0.67□□□□□ -2.3not detected
YCR001WYCR001W SNZ1Q03148 297 aa0.67□□□□□ -2.3
YCR001WYCR001W YDL180WQ12301 547 aa0.67□□□□□ -2.3
YCR001WYCR001W YNL146C-AQ3E7Z1 64 aa0.67□□□□□ -2.3
YCR001WYCR001W YLR156WP0CE96 114 aa0.66□□□□□ -2.3
YCR001WYCR001W YLR159WP0CE97 114 aa0.66□□□□□ -2.3
YCR001WYCR001W YLR161WP0CE98 114 aa0.66□□□□□ -2.3
YCR001WYCR001W ATG22P25568 528 aa0.66□□□□□ -2.3
YCR001WYCR001W YEL067CP39978 195 aa0.66□□□□□ -2.3
YCR001WYCR001W BNA6P43619 295 aa0.66□□□□□ -2.3
YCR001WYCR001W TRM9P49957 279 aa0.66□□□□□ -2.3
YCR001WYCR001W RPL37BP51402 88 aaKnown RBP0.66□□□□□ -2.3
YCR001WYCR001W MRPL50P53724 139 aa0.66□□□□□ -2.3
YCR001WYCR001W CUS2P53830 285 aaPredicted RBP0.66□□□□□ -2.3
YCR001WYCR001W POP3P53833 195 aaPredicted RBP0.66□□□□□ -2.3
YCR001WYCR001W KRE28Q04431 385 aa0.66□□□□□ -2.3
YCR001WYCR001W PAM18Q07914 168 aa0.66□□□□□ -2.3
YCR001WYCR001W LSO2Q3E772 92 aaKnown RBP0.66□□□□□ -2.3
YCR001WYCR001W TUS1Q06412 1307 aa0.65□□□□□ -2.3
YCR001WYCR001W ACC1Q00955 2233 aaKnown RBP0.65□□□□□ -2.3
YCR001WYCR001W AQY2P0CD90 149 aa0.65□□□□□ -2.31
YCR001WYCR001W NSP1P14907 823 aaKnown RBP0.65□□□□□ -2.31
YCR001WYCR001W RIB7P33312 244 aa0.65□□□□□ -2.31
YCR001WYCR001W SNC2P33328 115 aa0.65□□□□□ -2.31
YCR001WYCR001W SRY1P36007 326 aa0.65□□□□□ -2.31
YCR001WYCR001W MRPL17P36528 281 aa0.65□□□□□ -2.31
YCR001WYCR001W CUE1P38428 203 aa0.65□□□□□ -2.31
YCR001WYCR001W HUA1P40325 198 aa0.65□□□□□ -2.31
YCR001WYCR001W GAS3Q03655 524 aa0.65□□□□□ -2.31
YCR001WYCR001W YMR007WQ03675 126 aa0.65□□□□□ -2.31
YCR001WYCR001W YDR248CQ03786 193 aa0.65□□□□□ -2.31
YCR001WYCR001W ATG31Q12421 196 aa0.65□□□□□ -2.31
YCR001WYCR001W RPT5P33297 434 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms