RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W YDL183CP48569 320 aa4.33□□□□□ -1.72
CDC28YBR160W YIP4P53093 235 aa4.33□□□□□ -1.72
CDC28YBR160W OGG1P53397 376 aaPredicted RBP4.33□□□□□ -1.72
CDC28YBR160W YDC1Q02896 317 aa4.33□□□□□ -1.72
CDC28YBR160W YML018CQ03730 393 aa4.33□□□□□ -1.72
CDC28YBR160W ERP1Q05359 219 aaKnown RBP4.33□□□□□ -1.72
CDC28YBR160W MRX8Q05473 314 aa4.33□□□□□ -1.72
CDC28YBR160W MHR1Q06630 226 aa4.33□□□□□ -1.72
CDC28YBR160W HEM25Q07534 307 aa4.33□□□□□ -1.72
CDC28YBR160W ATG10Q07879 167 aa4.33□□□□□ -1.72
CDC28YBR160W USV1Q12132 391 aa4.33□□□□□ -1.72
CDC28YBR160W YCT1Q12235 531 aa4.33□□□□□ -1.72
CDC28YBR160W MCT1Q12283 360 aa4.33□□□□□ -1.72
CDC28YBR160W QCR2P07257 368 aa4.32□□□□□ -1.72
CDC28YBR160W NTF2P33331 125 aaKnown RBP4.32□□□□□ -1.72
CDC28YBR160W PAD1P33751 242 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CDC28YBR160W TAE1P38340 232 aa4.32□□□□□ -1.72
CDC28YBR160W YEA6P39953 335 aa4.32□□□□□ -1.72
CDC28YBR160W YEA4P40004 342 aa4.32□□□□□ -1.72
CDC28YBR160W YER010CP40011 234 aa4.32□□□□□ -1.72
CDC28YBR160W PHS1P40857 217 aa4.32□□□□□ -1.72
CDC28YBR160W YJR141WP47172 347 aaPredicted RBP4.32□□□□□ -1.72
CDC28YBR160W AVT4P50944 713 aa4.32□□□□□ -1.72
CDC28YBR160W MPA43P53583 542 aaPredicted RBP4.32□□□□□ -1.72
CDC28YBR160W CAB5Q03941 241 aa4.32□□□□□ -1.72
CDC28YBR160W YDR415CQ04033 374 aaPredicted RBP4.32□□□□□ -1.72
CDC28YBR160W YDR387CQ04162 555 aa4.32□□□□□ -1.72
CDC28YBR160W AVO2Q04749 426 aa4.32□□□□□ -1.72
CDC28YBR160W RTT103Q05543 409 aa4.32□□□□□ -1.72
CDC28YBR160W YLR456WQ06199 204 aa4.32□□□□□ -1.72
CDC28YBR160W MRX9Q07349 420 aaKnown RBP4.32□□□□□ -1.72
CDC28YBR160W COQ10Q08058 207 aa4.32□□□□□ -1.72
CDC28YBR160W PFA4Q12006 378 aa4.32□□□□□ -1.72
CDC28YBR160W VAM3Q12241 283 aa4.32□□□□□ -1.72
CDC28YBR160W YDR262WQ12331 272 aa4.32□□□□□ -1.72
CDC28YBR160W PAU19P0CE85 124 aa4.31□□□□□ -1.72
CDC28YBR160W PAU21P0CE86 164 aa4.31□□□□□ -1.72
CDC28YBR160W PAU22P0CE87 164 aa4.31□□□□□ -1.72
CDC28YBR160W FPR1P20081 114 aaKnown RBP4.31□□□□□ -1.72
CDC28YBR160W MIR1P23641 311 aaKnown RBP4.31□□□□□ -1.72
CDC28YBR160W PAU3P25610 124 aa4.31□□□□□ -1.72
CDC28YBR160W ERG3P32353 365 aa4.31□□□□□ -1.72
CDC28YBR160W EMP70P32802 667 aa4.31□□□□□ -1.72
CDC28YBR160W YPT53P36019 220 aa4.31□□□□□ -1.72
CDC28YBR160W MRPL28P36527 147 aa4.31□□□□□ -1.72
CDC28YBR160W RIB5P38145 238 aa4.31□□□□□ -1.72
CDC28YBR160W YBR292CP38357 123 aa4.31□□□□□ -1.72
CDC28YBR160W WSS1P38838 269 aa4.31□□□□□ -1.72
CDC28YBR160W XBP1P40489 647 aa4.31□□□□□ -1.72
CDC28YBR160W YIL067CP40514 678 aa4.31□□□□□ -1.72
CDC28YBR160W BNA1P47096 177 aa4.31□□□□□ -1.72
CDC28YBR160W BNS1P50084 137 aa4.31□□□□□ -1.72
CDC28YBR160W YGL262WP53054 175 aa4.31□□□□□ -1.72
CDC28YBR160W YNR066CP53752 436 aa4.31□□□□□ -1.72
CDC28YBR160W RHO3Q00245 231 aaKnown RBP4.31□□□□□ -1.72
CDC28YBR160W CYT2Q00873 224 aa4.31□□□□□ -1.72
CDC28YBR160W EGD1Q02642 157 aaKnown RBP4.31□□□□□ -1.72
CDC28YBR160W ADD37Q03233 198 aa4.31□□□□□ -1.72
CDC28YBR160W YDR248CQ03786 193 aa4.31□□□□□ -1.72
CDC28YBR160W SRL2Q12020 392 aa4.31□□□□□ -1.72
CDC28YBR160W TGS1Q12052 315 aa4.31□□□□□ -1.72
CDC28YBR160W COX17Q12287 69 aa4.31□□□□□ -1.72
CDC28YBR160W CTA1P15202 515 aa4.3□□□□□ -1.72
CDC28YBR160W CDC43P18898 376 aa4.3□□□□□ -1.72
CDC28YBR160W PTP1P25044 335 aa4.3□□□□□ -1.72
CDC28YBR160W RFA3P26755 122 aaKnown RBP4.3□□□□□ -1.72
CDC28YBR160W ARO4P32449 370 aaKnown RBP4.3□□□□□ -1.72
CDC28YBR160W PTR2P32901 601 aa4.3□□□□□ -1.72
CDC28YBR160W AUR1P36107 401 aaPredicted RBP4.3□□□□□ -1.72
CDC28YBR160W SSH1P38353 490 aaKnown RBP4.3□□□□□ -1.72
CDC28YBR160W OSW5P40219 148 aa4.3□□□□□ -1.72
CDC28YBR160W LRO1P40345 661 aa4.3□□□□□ -1.72
CDC28YBR160W ATF1P40353 525 aa4.3□□□□□ -1.72
CDC28YBR160W ERJ5P43613 295 aaPredicted RBP4.3□□□□□ -1.72
CDC28YBR160W IKS1P47042 667 aa4.3□□□□□ -1.72
CDC28YBR160W YGL114WP53134 725 aa4.3□□□□□ -1.72
CDC28YBR160W YGR066CP53242 292 aa4.3□□□□□ -1.72
CDC28YBR160W TPC1P53257 314 aa4.3□□□□□ -1.72
CDC28YBR160W PDR16P53860 351 aaKnown RBP4.3□□□□□ -1.72
CDC28YBR160W INP1Q03694 420 aa4.3□□□□□ -1.72
CDC28YBR160W ATC1Q04005 294 aa4.3□□□□□ -1.72
CDC28YBR160W THI74Q04083 370 aa4.3□□□□□ -1.72
CDC28YBR160W YML096WQ04489 525 aa4.3□□□□□ -1.72
CDC28YBR160W HRT1Q08273 121 aa4.3□□□□□ -1.72
CDC28YBR160W ATX2Q12067 313 aa4.3□□□□□ -1.72
CDC28YBR160W LEU9Q12166 604 aaKnown RBP4.3□□□□□ -1.72
CDC28YBR160W RLM1Q12224 676 aa4.3□□□□□ -1.72
CDC28YBR160W YLR302CO13544 120 aa4.29□□□□□ -1.72
CDC28YBR160W OPI3P05375 206 aa4.29□□□□□ -1.72
CDC28YBR160W GAL7P08431 366 aa4.29□□□□□ -1.72
CDC28YBR160W FUN14P18411 198 aa4.29□□□□□ -1.72
CDC28YBR160W MAK32P23060 363 aa4.29□□□□□ -1.72
CDC28YBR160W EHD3P28817 500 aa4.29□□□□□ -1.72
CDC28YBR160W MRPL15P36523 253 aa4.29□□□□□ -1.72
CDC28YBR160W UMP1P38293 148 aa4.29□□□□□ -1.72
CDC28YBR160W SLM6P38343 150 aa4.29□□□□□ -1.72
CDC28YBR160W RRP3P38712 501 aaKnown RBP4.29□□□□□ -1.72
CDC28YBR160W RTS2P40962 232 aa4.29□□□□□ -1.72
CDC28YBR160W MOB2P43563 287 aa4.29□□□□□ -1.72
CDC28YBR160W RMD9P53140 646 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms