RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W PAN6P40459 309 aa1.73□□□□□ -2.13
VPS8YAL002W BXI1P48558 297 aa1.73□□□□□ -2.13
VPS8YAL002W RPL4BP49626 362 aaKnown RBP1.73□□□□□ -2.13
VPS8YAL002W DYN2Q02647 92 aa1.73□□□□□ -2.13
VPS8YAL002W SDC1Q03323 175 aa1.73□□□□□ -2.13
VPS8YAL002W PKR1Q03880 122 aaKnown RBP1.73□□□□□ -2.13
VPS8YAL002W GAS2Q06135 555 aa1.73□□□□□ -2.13
VPS8YAL002W YLR030WQ07967 263 aa1.73□□□□□ -2.13
VPS8YAL002W ATX2Q12067 313 aa1.73□□□□□ -2.13
VPS8YAL002W CMD1P06787 147 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W MRS1P07266 363 aa1.72□□□□□ -2.13
VPS8YAL002W ERD2P18414 219 aa1.72□□□□□ -2.13
VPS8YAL002W TCA17P32613 152 aa1.72□□□□□ -2.13
VPS8YAL002W MRP21P38175 177 aa1.72□□□□□ -2.13
VPS8YAL002W CHL4P38907 458 aa1.72□□□□□ -2.13
VPS8YAL002W SEN34P39707 275 aa1.72□□□□□ -2.13
VPS8YAL002W YER137CP40083 148 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W YNL208WP40159 199 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W YMR144WP40214 342 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W YML096WQ04489 525 aa1.72□□□□□ -2.13
VPS8YAL002W YOL024WQ08172 172 aa1.72□□□□□ -2.13
VPS8YAL002W YPL257WQ08974 193 aa1.72□□□□□ -2.13
VPS8YAL002W YPL245WQ12179 454 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W COS2P0CX12 379 aa1.72□□□□□ -2.13
VPS8YAL002W COS3P0CX13 379 aa1.72□□□□□ -2.13
VPS8YAL002W NHP6AP11632 93 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W SEC22P22214 214 aa1.72□□□□□ -2.13
VPS8YAL002W MIR1P23641 311 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W ECM14P38836 430 aa1.72□□□□□ -2.13
VPS8YAL002W NVJ1P38881 321 aa1.72□□□□□ -2.13
VPS8YAL002W PCI8P40512 444 aa1.72□□□□□ -2.13
VPS8YAL002W FAR7P43592 221 aa1.72□□□□□ -2.13
VPS8YAL002W RBL2P48606 106 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W COG7P53195 279 aa1.72□□□□□ -2.13
VPS8YAL002W TMA20P89886 181 aaPredicted RBP1.72□□□□□ -2.13
VPS8YAL002W MAK3Q03503 176 aa1.72□□□□□ -2.13
VPS8YAL002W UTP15Q04305 513 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W HNT1Q04344 158 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W RRP40Q08285 240 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W DBF2P22204 572 aa1.72□□□□□ -2.13
VPS8YAL002W MBA1P38300 278 aa1.72□□□□□ -2.13
VPS8YAL002W LSM12P38828 187 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W PET8P38921 284 aa1.72□□□□□ -2.13
VPS8YAL002W CFD1P40558 293 aa1.72□□□□□ -2.13
VPS8YAL002W APS3P47064 194 aa1.72□□□□□ -2.13
VPS8YAL002W YJR111CP47148 283 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W UBC12P52491 188 aa1.72□□□□□ -2.13
VPS8YAL002W PLP1Q04004 230 aa1.72□□□□□ -2.13
VPS8YAL002W HPT1Q04178 221 aaKnown RBP1.72□□□□□ -2.13
VPS8YAL002W YMR254CQ04838 102 aa1.72□□□□□ -2.13
VPS8YAL002W CDC28P00546 298 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W YCR022CP25620 114 aa1.71□□□□□ -2.14
VPS8YAL002W SSH1P38353 490 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W SCS3P53012 380 aa1.71□□□□□ -2.14
VPS8YAL002W MRH4P53166 561 aa1.71□□□□□ -2.14
VPS8YAL002W MPA43P53583 542 aaPredicted RBP1.71□□□□□ -2.14
VPS8YAL002W YNL046WP53956 172 aa1.71□□□□□ -2.14
VPS8YAL002W RMI1Q02685 241 aa1.71□□□□□ -2.14
VPS8YAL002W SWP1Q02795 286 aa1.71□□□□□ -2.14
VPS8YAL002W TDA1Q03533 586 aa1.71□□□□□ -2.14
VPS8YAL002W RFU1Q08003 200 aa1.71□□□□□ -2.14
VPS8YAL002W YLR046CQ12253 270 aa1.71□□□□□ -2.14
VPS8YAL002W RPS18AP0CX55 146 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W RPS18BP0CX56 146 aaPredicted RBP1.71□□□□□ -2.14
VPS8YAL002W ATR1P13090 542 aa1.71□□□□□ -2.14
VPS8YAL002W CUP2P15315 225 aa1.71□□□□□ -2.14
VPS8YAL002W AIM17P23180 465 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W ATG15P25641 520 aa1.71□□□□□ -2.14
VPS8YAL002W CAM1P29547 415 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W APS1P35181 156 aa1.71□□□□□ -2.14
VPS8YAL002W MRPL39P36533 70 aa1.71□□□□□ -2.14
VPS8YAL002W IPI1P38803 334 aaPredicted RBP1.71□□□□□ -2.14
VPS8YAL002W YGR201CP42936 225 aa1.71□□□□□ -2.14
VPS8YAL002W YNL184CP53876 108 aa1.71□□□□□ -2.14
VPS8YAL002W DID2P69771 204 aa1.71□□□□□ -2.14
VPS8YAL002W AIM34Q03673 198 aa1.71□□□□□ -2.14
VPS8YAL002W YML108WQ03759 105 aa1.71□□□□□ -2.14
VPS8YAL002W HCR1Q05775 265 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W YPL229WQ99395 206 aa1.71□□□□□ -2.14
VPS8YAL002W BEM2P39960 2167 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W TRP1P00912 224 aa1.71□□□□□ -2.14
VPS8YAL002W RNA14P25298 677 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W ILV6P25605 309 aaKnown RBP1.71□□□□□ -2.14
VPS8YAL002W GPX1P36014 167 aa1.71□□□□□ -2.14
VPS8YAL002W PEX17P40155 199 aa1.71□□□□□ -2.14
VPS8YAL002W YIL067CP40514 678 aa1.71□□□□□ -2.14
VPS8YAL002W CRZ1P53968 678 aa1.71□□□□□ -2.14
VPS8YAL002W HSK3P69852 69 aa1.71□□□□□ -2.14
VPS8YAL002W SYC1Q08553 188 aaPredicted RBP1.71□□□□□ -2.14
VPS8YAL002W FDH1Q08911 376 aa1.71□□□□□ -2.14
VPS8YAL002W TIR4Q12218 487 aaPredicted RBP1.71□□□□□ -2.14
VPS8YAL002W COX5AP00424 153 aa1.7□□□□□ -2.14
VPS8YAL002W MCK1P21965 375 aaKnown RBP1.7□□□□□ -2.14
VPS8YAL002W MRPL20P22354 195 aaPredicted RBP1.7□□□□□ -2.14
VPS8YAL002W YCR023CP25351 611 aa1.7□□□□□ -2.14
VPS8YAL002W ATS1P31386 333 aa1.7□□□□□ -2.14
VPS8YAL002W HEK2P38199 381 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
VPS8YAL002W ARN2P38724 620 aa1.7□□□□□ -2.14
VPS8YAL002W PEX22P39718 180 aa1.7□□□□□ -2.14
VPS8YAL002W ALB1P47019 175 aaPredicted RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms