RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 RPL1AP0CX43 217 aaKnown RBP-3.08□□□□□ -2.9
snR53snR53 RPL1BP0CX44 217 aaKnown RBP-3.08□□□□□ -2.9
snR53snR53 SNA3P14359 133 aa-3.08□□□□□ -2.9
snR53snR53 ERG24P32462 438 aaKnown RBP-3.08□□□□□ -2.9
snR53snR53 TPM2P40414 161 aa-3.08□□□□□ -2.9
snR53snR53 SOL1P50278 321 aa-3.08□□□□□ -2.9
snR53snR53 YGR168CP53293 376 aa-3.08□□□□□ -2.9
snR53snR53 YMR226CQ05016 267 aaKnown RBP-3.08□□□□□ -2.9
snR53snR53 YRA1Q12159 226 aaKnown RBP-3.08□□□□□ -2.9
snR53snR53 SPO24Q3E752 67 aa-3.08□□□□□ -2.9
snR53snR53 SWI1P09547 1314 aa-3.09□□□□□ -2.9
snR53snR53 SEC11P15367 167 aa-3.09□□□□□ -2.9
snR53snR53 RPT5P33297 434 aaKnown RBP-3.09□□□□□ -2.9
snR53snR53 YGL159WP53110 370 aa-3.09□□□□□ -2.9
snR53snR53 GTR2P53290 341 aa-3.09□□□□□ -2.9
snR53snR53 FAR8Q05040 523 aa-3.09□□□□□ -2.9
snR53snR53 YER189WP40104 122 aa-3.1□□□□□ -2.91
snR53snR53 MET31Q03081 177 aa-3.1□□□□□ -2.91
snR53snR53 ELP6Q04868 273 aa-3.1□□□□□ -2.91
snR53snR53 PBP4Q07362 185 aaKnown RBP-3.1□□□□□ -2.91
snR53snR53 YFH1Q07540 174 aa-3.1□□□□□ -2.91
snR53snR53 RAD28Q12021 506 aa-3.1□□□□□ -2.91
snR53snR53 YAL064W-BO13512 126 aa-3.11□□□□□ -2.91
snR53snR53 LAS1P36146 502 aaPredicted RBP-3.11□□□□□ -2.91
snR53snR53 ALP1P38971 573 aa-3.11□□□□□ -2.91
snR53snR53 HPA3P39979 161 aa-3.11□□□□□ -2.91
snR53snR53 KAP114P53067 1004 aa-3.11□□□□□ -2.91
snR53snR53 YGL034CP53186 121 aa-3.11□□□□□ -2.91
snR53snR53 TUS1Q06412 1307 aa-3.12□□□□□ -2.91
snR53snR53 CDC8P00572 216 aa-3.12□□□□□ -2.91
snR53snR53 VMA22P38784 181 aa-3.12□□□□□ -2.91
snR53snR53 MPP10P47083 593 aaKnown RBP-3.12□□□□□ -2.91
snR53snR53 ALG11P53954 548 aaKnown RBP-3.12□□□□□ -2.91
snR53snR53 GRE1Q08969 168 aa-3.12□□□□□ -2.91
snR53snR53 YLR236CA0A023PZG4 107 aa-3.13□□□□□ -2.91
snR53snR53 SEN2P16658 377 aa-3.13□□□□□ -2.91
snR53snR53 HEK2P38199 381 aaKnown RBP RIP-Chip data-3.13□□□□□ -2.91not detected
snR53snR53 APE4P38821 490 aa-3.13□□□□□ -2.91
snR53snR53 SER33P40510 469 aa-3.13□□□□□ -2.91
snR53snR53 IBA57P47158 497 aa-3.13□□□□□ -2.91
snR53snR53 YLR287CQ05881 355 aa-3.13□□□□□ -2.91
snR53snR53 PER33Q12144 273 aa-3.13□□□□□ -2.91
snR53snR53 DPB3P27344 201 aa-3.14□□□□□ -2.91
snR53snR53 PRE6P40303 254 aaKnown RBP-3.14□□□□□ -2.91
snR53snR53 UPS3Q04006 179 aa-3.14□□□□□ -2.91
snR53snR53 CUE4Q04201 117 aaPredicted RBP-3.14□□□□□ -2.91
snR53snR53 YOR034C-AQ3E735 80 aa-3.14□□□□□ -2.91
snR53snR53 UBC6P33296 250 aaPredicted RBP-3.15□□□□□ -2.91
snR53snR53 RPB7P34087 171 aa-3.15□□□□□ -2.91
snR53snR53 YKL063CP35725 167 aa-3.15□□□□□ -2.91
snR53snR53 SWD2P36104 329 aaPredicted RBP-3.15□□□□□ -2.91
snR53snR53 MRX3P38172 270 aa-3.15□□□□□ -2.91
snR53snR53 RMT2Q03305 412 aa-3.15□□□□□ -2.91
snR53snR53 YPL257WQ08974 193 aa-3.15□□□□□ -2.91
snR53snR53 MRPS28P21771 286 aa-3.16□□□□□ -2.92
snR53snR53 POF1P25576 258 aa-3.16□□□□□ -2.92
snR53snR53 YPT52P36018 234 aaKnown RBP-3.16□□□□□ -2.92
snR53snR53 YAR068WP39564 161 aa-3.16□□□□□ -2.92
snR53snR53 INA22P40576 216 aa-3.16□□□□□ -2.92
snR53snR53 SEC10Q06245 871 aa-3.16□□□□□ -2.92
snR53snR53 APC9Q12107 265 aa-3.16□□□□□ -2.92
snR53snR53 YKL162CP36052 402 aa-3.17□□□□□ -2.92
snR53snR53 RPC37P36121 282 aa-3.17□□□□□ -2.92
snR53snR53 HIS2P38635 335 aa-3.17□□□□□ -2.92
snR53snR53 HTD2P38790 280 aaKnown RBP-3.17□□□□□ -2.92
snR53snR53 YPL073CP40323 161 aa-3.17□□□□□ -2.92
snR53snR53 YNL050CP53952 270 aa-3.17□□□□□ -2.92
snR53snR53 UTP6Q02354 440 aaKnown RBP-3.17□□□□□ -2.92
snR53snR53 YDC1Q02896 317 aa-3.17□□□□□ -2.92
snR53snR53 ABZ2Q03266 374 aa-3.17□□□□□ -2.92
snR53snR53 BUD21Q08492 214 aaPredicted RBP-3.17□□□□□ -2.92
snR53snR53 YOS9Q99220 542 aa-3.17□□□□□ -2.92
snR53snR53 ATG40Q99325 256 aa-3.17□□□□□ -2.92
snR53snR53 ROM2P51862 1356 aaKnown RBP-3.17□□□□□ -2.92
snR53snR53 FAS1P07149 2051 aaKnown RBP-3.18□□□□□ -2.92
snR53snR53 ATP6P00854 259 aa-3.18□□□□□ -2.92
snR53snR53 YIA6P40556 373 aa-3.18□□□□□ -2.92
snR53snR53 EAF6P47128 113 aa-3.18□□□□□ -2.92
snR53snR53 RMR1P53060 241 aa-3.18□□□□□ -2.92
snR53snR53 LSB1P53281 241 aa-3.18□□□□□ -2.92
snR53snR53 YNL146WP53906 100 aa-3.18□□□□□ -2.92
snR53snR53 SER2P42941 309 aa-3.19□□□□□ -2.92
snR53snR53 YJR056CP47115 236 aa-3.19□□□□□ -2.92
snR53snR53 KEI1Q06346 221 aa-3.19□□□□□ -2.92
snR53snR53 TSR2Q06672 205 aaKnown RBP-3.19□□□□□ -2.92
snR53snR53 URA2P07259 2214 aaKnown RBP-3.2□□□□□ -2.92
snR53snR53 ICL1P28240 557 aaPredicted RBP-3.2□□□□□ -2.92
snR53snR53 DOG2P38773 246 aa-3.2□□□□□ -2.92
snR53snR53 ASR1Q06834 288 aa-3.2□□□□□ -2.92
snR53snR53 NIP7Q08962 181 aaKnown RBP-3.2□□□□□ -2.92
snR53snR53 YDR262WQ12331 272 aa-3.2□□□□□ -2.92
snR53snR53 FUR1P18562 216 aaKnown RBP-3.21□□□□□ -2.92
snR53snR53 POT1P27796 417 aaKnown RBP RIP-Chip data-3.21□□□□□ -2.92not detected
snR53snR53 MSN4P33749 630 aa-3.21□□□□□ -2.92
snR53snR53 ECM33P38248 429 aaKnown RBP-3.21□□□□□ -2.92
snR53snR53 UMP1P38293 148 aa-3.21□□□□□ -2.92
snR53snR53 BUD27P43573 796 aaKnown RBP RIP-Chip data-3.21□□□□□ -2.92not detected
snR53snR53 MLC1P53141 149 aa-3.21□□□□□ -2.92
snR53snR53 VPS71Q03433 280 aa-3.21□□□□□ -2.92
snR53snR53 TRM12Q04235 462 aa-3.21□□□□□ -2.92
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms