RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C BUD25P85052 153 aa0.54□□□□□ -2.32
NIP100YPL174C RSM10Q03201 203 aa0.54□□□□□ -2.32
NIP100YPL174C ADH6Q04894 360 aaKnown RBP0.54□□□□□ -2.32
NIP100YPL174C MRPL37P36532 105 aa0.53□□□□□ -2.32
NIP100YPL174C YKE4P40544 346 aa0.53□□□□□ -2.32
NIP100YPL174C LSB1P53281 241 aa0.53□□□□□ -2.32
NIP100YPL174C CDC14Q00684 551 aa0.53□□□□□ -2.32
NIP100YPL174C SNU23Q12368 194 aaPredicted RBP0.53□□□□□ -2.32
NIP100YPL174C FCY2P17064 533 aa0.53□□□□□ -2.32
NIP100YPL174C JEN1P36035 616 aa0.53□□□□□ -2.32
NIP100YPL174C RCY1P39531 840 aa0.53□□□□□ -2.32
NIP100YPL174C SNZ3P43545 298 aa0.53□□□□□ -2.32
NIP100YPL174C NBP35P52920 328 aa0.53□□□□□ -2.32
NIP100YPL174C KAP114P53067 1004 aa0.53□□□□□ -2.32
NIP100YPL174C ALG11P53954 548 aaKnown RBP0.53□□□□□ -2.32
NIP100YPL174C MZM1Q03429 123 aaPredicted RBP0.53□□□□□ -2.32
NIP100YPL174C HTL1Q9URQ5 78 aa0.53□□□□□ -2.32
NIP100YPL174C YOR093CQ12275 1648 aa0.53□□□□□ -2.33
NIP100YPL174C QCR8P08525 94 aa0.52□□□□□ -2.33
NIP100YPL174C YGL010WP25338 174 aa0.52□□□□□ -2.33
NIP100YPL174C AVT2P39981 480 aa0.52□□□□□ -2.33
NIP100YPL174C YGL159WP53110 370 aa0.52□□□□□ -2.33
NIP100YPL174C FAR8Q05040 523 aa0.52□□□□□ -2.33
NIP100YPL174C NEJ1Q06148 342 aa0.52□□□□□ -2.33
NIP100YPL174C SYC1Q08553 188 aaPredicted RBP0.52□□□□□ -2.33
NIP100YPL174C USB1Q12208 290 aaKnown RBP0.52□□□□□ -2.33
NIP100YPL174C EMP46Q12396 444 aa0.52□□□□□ -2.33
NIP100YPL174C DAL82P21705 255 aa0.52□□□□□ -2.33
NIP100YPL174C FMP33P46998 180 aa0.52□□□□□ -2.33
NIP100YPL174C GTR2P53290 341 aa0.52□□□□□ -2.33
NIP100YPL174C SPG4Q04438 115 aa0.52□□□□□ -2.33
NIP100YPL174C YLR030WQ07967 263 aa0.52□□□□□ -2.33
NIP100YPL174C RPL13BP40212 199 aaKnown RBP0.51□□□□□ -2.33
NIP100YPL174C LOC1P43586 204 aaPredicted RBP0.51□□□□□ -2.33
NIP100YPL174C ILM1P47155 203 aa0.51□□□□□ -2.33
NIP100YPL174C USE1P53146 245 aa0.51□□□□□ -2.33
NIP100YPL174C SNZ2P53824 298 aa0.51□□□□□ -2.33
NIP100YPL174C CSI2Q08054 341 aa0.51□□□□□ -2.33
NIP100YPL174C RPL13AQ12690 199 aaPredicted RBP0.51□□□□□ -2.33
NIP100YPL174C RNA15P25299 296 aaPredicted RBP0.51□□□□□ -2.33
NIP100YPL174C MRX3P38172 270 aa0.51□□□□□ -2.33
NIP100YPL174C PRS2P38620 318 aaKnown RBP0.51□□□□□ -2.33
NIP100YPL174C YMR144WP40214 342 aaKnown RBP0.51□□□□□ -2.33
NIP100YPL174C RPL33BP41056 107 aaKnown RBP0.51□□□□□ -2.33
NIP100YPL174C MRH4P53166 561 aa0.51□□□□□ -2.33
NIP100YPL174C DRS2P39524 1355 aa0.51□□□□□ -2.33
NIP100YPL174C YBR220CP38318 560 aa0.51□□□□□ -2.33
NIP100YPL174C YER135CP40082 130 aa0.51□□□□□ -2.33
NIP100YPL174C MPP6P53725 186 aaPredicted RBP0.51□□□□□ -2.33
NIP100YPL174C SML1Q04964 104 aa0.51□□□□□ -2.33
NIP100YPL174C YPL162CQ12042 273 aa0.51□□□□□ -2.33
NIP100YPL174C YOR020W-AQ3E824 90 aa0.51□□□□□ -2.33
NIP100YPL174C GPA2P10823 449 aa0.5□□□□□ -2.33
NIP100YPL174C YHR127WP38833 243 aaKnown RBP0.5□□□□□ -2.33
NIP100YPL174C DSN1P40568 576 aa0.5□□□□□ -2.33
NIP100YPL174C YGL034CP53186 121 aa0.5□□□□□ -2.33
NIP100YPL174C YMD8Q03697 442 aa0.5□□□□□ -2.33
NIP100YPL174C COX20Q04935 205 aa0.5□□□□□ -2.33
NIP100YPL174C PGD1P40356 397 aa0.5□□□□□ -2.33
NIP100YPL174C INO80P53115 1489 aa0.5□□□□□ -2.33
NIP100YPL174C HEM25Q07534 307 aa0.5□□□□□ -2.33
NIP100YPL174C MRPS28P21771 286 aa0.49□□□□□ -2.33
NIP100YPL174C YPT52P36018 234 aaKnown RBP0.49□□□□□ -2.33
NIP100YPL174C DOG1P38774 246 aa0.49□□□□□ -2.33
NIP100YPL174C YJR079WP47126 109 aa0.49□□□□□ -2.33
NIP100YPL174C NUP57P48837 541 aa0.49□□□□□ -2.33
NIP100YPL174C SNF8Q12483 233 aa0.49□□□□□ -2.33
NIP100YPL174C MEP1P40260 492 aa0.49□□□□□ -2.33
NIP100YPL174C HAM1P47119 197 aaKnown RBP0.49□□□□□ -2.33
NIP100YPL174C GPI8P49018 411 aa0.49□□□□□ -2.33
NIP100YPL174C YOL107WQ12239 342 aa0.49□□□□□ -2.33
NIP100YPL174C THO2P53552 1597 aaKnown RBP0.48□□□□□ -2.33
NIP100YPL174C PDR15Q04182 1529 aaKnown RBP0.48□□□□□ -2.33
NIP100YPL174C TOR1P35169 2470 aa0.48□□□□□ -2.33
NIP100YPL174C CDC8P00572 216 aa0.48□□□□□ -2.33
NIP100YPL174C YPR170W-BP0C5R9 85 aa0.48□□□□□ -2.33
NIP100YPL174C DDI2P0CH63 225 aa0.48□□□□□ -2.33
NIP100YPL174C DDI3P0CH64 225 aa0.48□□□□□ -2.33
NIP100YPL174C SNA3P14359 133 aa0.48□□□□□ -2.33
NIP100YPL174C PET9P18239 318 aaKnown RBP0.48□□□□□ -2.33
NIP100YPL174C YHR180WP38868 163 aa0.48□□□□□ -2.33
NIP100YPL174C YPR172WQ06608 200 aa0.48□□□□□ -2.33
NIP100YPL174C RIO1Q12196 484 aaKnown RBP0.48□□□□□ -2.33
NIP100YPL174C COX5AP00424 153 aa0.48□□□□□ -2.33
NIP100YPL174C BFR1P38934 470 aaKnown RBP RIP-Chip data0.48□□□□□ -2.33not detected
NIP100YPL174C SMD3P43321 101 aaKnown RBP0.48□□□□□ -2.33
NIP100YPL174C TOS8P53147 276 aa0.48□□□□□ -2.33
NIP100YPL174C SAY1P53324 424 aa0.48□□□□□ -2.33
NIP100YPL174C SIR4P11978 1358 aa0.47□□□□□ -2.33
NIP100YPL174C DNF2Q12675 1612 aa0.47□□□□□ -2.33
NIP100YPL174C FZF1P32805 299 aa0.47□□□□□ -2.33
NIP100YPL174C GLE2P40066 365 aa0.47□□□□□ -2.33
NIP100YPL174C CAT5P41735 233 aa0.47□□□□□ -2.33
NIP100YPL174C YJR056CP47115 236 aa0.47□□□□□ -2.33
NIP100YPL174C MRPL50P53724 139 aa0.47□□□□□ -2.33
NIP100YPL174C YOR186WQ08560 144 aa0.47□□□□□ -2.33
NIP100YPL174C YCT1Q12235 531 aa0.47□□□□□ -2.33
NIP100YPL174C NTE1Q04958 1679 aa0.47□□□□□ -2.33
NIP100YPL174C RPL2AP0CX45 254 aaKnown RBP0.47□□□□□ -2.33
NIP100YPL174C RPL2BP0CX46 254 aaKnown RBP0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms