RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	RPL10	P41805	221 aa	Known RBP	3.37	□□□□□ -1.87
FDH1	YOR388C	POP1	P41812	875 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	NSE4	P43124	402 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	YJL016W	P47072	561 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	MCM22	P47167	239 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	YJR149W	P47177	404 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	TRM9	P49957	279 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	MDM34	P53083	459 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	YNL260C	P53846	198 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	TPS1	Q00764	495 aa	Known RBP	3.37	□□□□□ -1.87
FDH1	YOR388C	MET31	Q03081	177 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	ELP6	Q04868	273 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	NNT1	Q05874	261 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	GAS2	Q06135	555 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	YPL245W	Q12179	454 aa	Known RBP	3.37	□□□□□ -1.87
FDH1	YOR388C	PCC1	Q3E833	88 aa		3.37	□□□□□ -1.87
FDH1	YOR388C	BRR2	P32639	2163 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	TRA1	P38811	3744 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	YBR056W-A	I2HB52	66 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	YPR096C	O13587	100 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	MDM35	O60200	86 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	MES1	P00958	751 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	HHF1	P02309	103 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	LEU4	P06208	619 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	RIP1	P08067	215 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	GAL7	P08431	366 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	RPS18A	P0CX55	146 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	RPS18B	P0CX56	146 aa	Predicted RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	ZWF1	P11412	505 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	ERD2	P18414	219 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	SEC22	P22214	214 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	LDS1	P31379	325 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	SPO23	P33757	523 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	CBP4	P37267	147 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	SHE1	P38200	338 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	PTH1	P38876	190 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	ALP1	P38971	573 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	MEP1	P40260	492 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	YFL067W	P43537	175 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	SNN1	P48232	102 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	PMT5	P52867	743 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	SDT1	P53078	280 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	ASI3	P53983	676 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	YCL001W-A	P87012	153 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	PAL1	Q05518	499 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	PBA1	Q05778	276 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	DCR2	Q05924	578 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	MDM30	Q05930	598 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	GPN3	Q06543	272 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	YLR030W	Q07967	263 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	SCP1	Q08873	200 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	TMS1	Q12116	473 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	EAF3	Q12432	401 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	MHT1	Q12525	324 aa		3.36	□□□□□ -1.87
FDH1	YOR388C	CYR1	P08678	2026 aa	Known RBP	3.36	□□□□□ -1.87
FDH1	YOR388C	GCN1	P33892	2672 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	CAR2	P07991	424 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	MER1	P16523	270 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	PET9	P18239	318 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	FUR1	P18562	216 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	MAG1	P22134	296 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	IFM1	P25038	676 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	TRX3	P25372	127 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	VMA5	P31412	392 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	KRE6	P32486	720 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	SCM4	P32564	187 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	GLC7	P32598	312 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	SUR1	P33300	382 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	ECT1	P33412	323 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	YKL162C	P36052	402 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	RRN10	P38204	145 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	BMT2	P38278	337 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	ERV15	P38312	142 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	PRS3	P38689	320 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	MNL1	P38888	796 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	RMD6	P39975	231 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	PGD1	P40356	397 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	FMC1	P40491	155 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	PRM10	P42946	383 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	MRX5	P47007	382 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	TAD2	P47058	250 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	MOG1	P47123	218 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	AIM24	P47127	394 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	IBA57	P47158	497 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	AVT4	P50944	713 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	VOA1	P53262	265 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	SYF2	P53277	215 aa	Predicted RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	OGG1	P53397	376 aa	Predicted RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	SNO1	Q03144	224 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	SPO77	Q06134	477 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	ANT1	Q06497	328 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	MHR1	Q06630	226 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	RPN5	Q12250	445 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	RRP42	Q12277	265 aa	Predicted RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	DCN1	Q12395	269 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	YPR145C-A	Q2V2P0	78 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	YLR099W-A	Q3E798	87 aa		3.35	□□□□□ -1.87
FDH1	YOR388C	PRP8	P33334	2413 aa	Known RBP	3.35	□□□□□ -1.87
FDH1	YOR388C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.34	□□□□□ -1.87	not detected
FDH1	YOR388C	PUT1	P09368	476 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms