RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	PET20	Q99373	253 aa		4.66	□□□□□ -1.66
GEP3	YOR205C	REP2	P03872	296 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	RPL25	P04456	142 aa	Known RBP	4.65	□□□□□ -1.66
GEP3	YOR205C	PET122	P10355	254 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	DIT1	P21623	536 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	VAM7	P32912	316 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	UTP30	P36144	274 aa	Known RBP	4.65	□□□□□ -1.66
GEP3	YOR205C	MRPL27	P36526	146 aa	Predicted RBP	4.65	□□□□□ -1.66
GEP3	YOR205C	SSN8	P47821	323 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	UFD1	P53044	361 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	not detected
GEP3	YOR205C	YPL077C	Q02831	240 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	HAS1	Q03532	505 aa	Known RBP	4.65	□□□□□ -1.66
GEP3	YOR205C	YOR186W	Q08560	144 aa		4.65	□□□□□ -1.66
GEP3	YOR205C	RRS1	Q08746	203 aa	Known RBP	4.65	□□□□□ -1.66
GEP3	YOR205C	CDC28	P00546	298 aa	Known RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	RPS31	P05759	152 aa	Known RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	HNM1	P19807	563 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	SAG1	P20840	650 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	IFM1	P25038	676 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	YCR101C	P25607	182 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	ATG15	P25641	520 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	GLC7	P32598	312 aa	Known RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	REC114	P32841	428 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	COS8	P38723	381 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	VMA22	P38784	181 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	YER079W	P40052	210 aa	Known RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	SWM2	P40342	146 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	YJR011C	P47086	261 aa	Predicted RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	YDC1	Q02896	317 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	CAB5	Q03941	241 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	PLP1	Q04004	230 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	PIN3	Q06449	215 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	MED4	Q12343	284 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	EAF3	Q12432	401 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	ARG80	P07249	177 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	MSI1	P13712	422 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	RFA1	P22336	621 aa	Known RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	SUA5	P32579	426 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	FMT1	P32785	401 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	MRPL36	P36531	177 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	LAG1	P38703	411 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	RRF1	P38771	230 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	YER137C	P40083	148 aa	Known RBP	4.64	□□□□□ -1.67
GEP3	YOR205C	YPL067C	Q02754	198 aa		4.64	□□□□□ -1.67
GEP3	YOR205C	AAC1	P04710	309 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	YLL053C	P0CD98	152 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	RPS23A	P0CX29	145 aa	Known RBP	4.63	□□□□□ -1.67
GEP3	YOR205C	RPS23B	P0CX30	145 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	CPR4	P25334	318 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	FIG1	P38224	298 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	FAT1	P38225	669 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	YBR220C	P38318	560 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	PRS3	P38689	320 aa	Known RBP	4.63	□□□□□ -1.67
GEP3	YOR205C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
GEP3	YOR205C	OST1	P41543	476 aa	Known RBP	4.63	□□□□□ -1.67
GEP3	YOR205C	EGT2	P42835	1041 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	YGR210C	P42942	411 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	MRX5	P47007	382 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	YIP5	P53108	310 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	TYW3	P53177	273 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	DLT1	Q04216	342 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	YMR254C	Q04838	102 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	SCP1	Q08873	200 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	NCE102	Q12207	173 aa	RIP-Chip data	4.63	□□□□□ -1.67	not detected
GEP3	YOR205C	UBA3	Q99344	299 aa		4.63	□□□□□ -1.67
GEP3	YOR205C	PEX4	P29340	183 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	ACB1	P31787	87 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	VMA8	P32610	256 aa	Known RBP	4.62	□□□□□ -1.67
GEP3	YOR205C	FLO10	P36170	1169 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	POP8	P38208	133 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	PRS2	P38620	318 aa	Known RBP	4.62	□□□□□ -1.67
GEP3	YOR205C	YMR144W	P40214	342 aa	Known RBP	4.62	□□□□□ -1.67
GEP3	YOR205C	TOK1	P40310	691 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	BMT5	P40493	336 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	ECM27	P47144	725 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	OKP1	P53298	406 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	CRZ1	P53968	678 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	SMX3	P54999	86 aa	Predicted RBP	4.62	□□□□□ -1.67
GEP3	YOR205C	PRM15	Q03262	622 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	GRC3	Q07845	632 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	VAM3	Q12241	283 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	ATG40	Q99325	256 aa		4.62	□□□□□ -1.67
GEP3	YOR205C	MAG1	P22134	296 aa	Known RBP	4.61	□□□□□ -1.67
GEP3	YOR205C	YBR197C	P38306	217 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	YFL051C	P43552	160 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	HNT2	P49775	206 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	TAF4	P50105	388 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	YDR286C	Q05530	114 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	UPS1	Q05776	175 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	SYM1	Q06563	197 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	YNG1	Q08465	219 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	FCY22	Q12119	530 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	YML003W	P0CF16	290 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	CKA1	P15790	372 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	STF2	P16965	84 aa		4.61	□□□□□ -1.67
GEP3	YOR205C	OLE1	P21147	510 aa	Known RBP	4.61	□□□□□ -1.67
GEP3	YOR205C	RPI1	P23250	407 aa	Known RBP	4.61	□□□□□ -1.67
GEP3	YOR205C	YCR016W	P25617	290 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms