RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W SPS100P13130 326 aa3.3□□□□□ -1.88
ROD1YOR018W RPL3P14126 387 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W MRS4P23500 304 aa3.3□□□□□ -1.88
ROD1YOR018W RNA14P25298 677 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W HYM1P32464 399 aa3.3□□□□□ -1.88
ROD1YOR018W HIS7P33734 552 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W UMP1P38293 148 aa3.3□□□□□ -1.88
ROD1YOR018W YIL029CP40538 142 aa3.3□□□□□ -1.88
ROD1YOR018W OST1P41543 476 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W GPI14P47088 403 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W YGL159WP53110 370 aa3.3□□□□□ -1.88
ROD1YOR018W YLR108CQ12259 485 aa3.3□□□□□ -1.88
ROD1YOR018W SFG1Q12507 346 aa3.3□□□□□ -1.88
ROD1YOR018W CDC36P06100 191 aaPredicted RBP3.3□□□□□ -1.88
ROD1YOR018W HEM4P06174 275 aa3.3□□□□□ -1.88
ROD1YOR018W RPI1P23250 407 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W HXT2P23585 541 aa3.3□□□□□ -1.88
ROD1YOR018W GLC7P32598 312 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W SNC2P33328 115 aa3.3□□□□□ -1.88
ROD1YOR018W RCN1P36054 211 aa3.3□□□□□ -1.88
ROD1YOR018W MRPL39P36533 70 aa3.3□□□□□ -1.88
ROD1YOR018W PUG1P40100 303 aa3.3□□□□□ -1.88
ROD1YOR018W IDP2P41939 412 aa3.3□□□□□ -1.88
ROD1YOR018W TPN1P53099 579 aa3.3□□□□□ -1.88
ROD1YOR018W SAM50P53969 484 aa3.3□□□□□ -1.88
ROD1YOR018W RCE1Q03530 315 aa3.3□□□□□ -1.88
ROD1YOR018W TDA1Q03533 586 aa3.3□□□□□ -1.88
ROD1YOR018W YDR415CQ04033 374 aaPredicted RBP3.3□□□□□ -1.88
ROD1YOR018W HRI1Q05905 244 aaKnown RBP3.3□□□□□ -1.88
ROD1YOR018W STP4Q07351 490 aa3.3□□□□□ -1.88
ROD1YOR018W LAS17Q12446 633 aa3.3□□□□□ -1.88
ROD1YOR018W MATALPHA1P0CY06 175 aa3.29□□□□□ -1.88
ROD1YOR018W HMLALPHA1P0CY07 175 aa3.29□□□□□ -1.88
ROD1YOR018W SPO7P18410 259 aa3.29□□□□□ -1.88
ROD1YOR018W DEG1P31115 442 aaKnown RBP3.29□□□□□ -1.88
ROD1YOR018W YKL063CP35725 167 aa3.29□□□□□ -1.88
ROD1YOR018W MOB2P43563 287 aa3.29□□□□□ -1.88
ROD1YOR018W RPN14P53196 417 aa3.29□□□□□ -1.88
ROD1YOR018W CTF19Q02732 369 aa3.29□□□□□ -1.88
ROD1YOR018W UTP15Q04305 513 aaKnown RBP3.29□□□□□ -1.88
ROD1YOR018W COA4Q05809 96 aa3.29□□□□□ -1.88
ROD1YOR018W YOL118CQ08259 102 aa3.29□□□□□ -1.88
ROD1YOR018W SCEIP03882 235 aa3.29□□□□□ -1.88
ROD1YOR018W COQ2P32378 372 aa3.29□□□□□ -1.88
ROD1YOR018W PPQ1P32945 549 aa3.29□□□□□ -1.88
ROD1YOR018W PPZ2P33329 710 aa3.29□□□□□ -1.88
ROD1YOR018W YER079WP40052 210 aaKnown RBP3.29□□□□□ -1.88
ROD1YOR018W SLZ1P40167 298 aa3.29□□□□□ -1.88
ROD1YOR018W AIM25P47140 327 aa3.29□□□□□ -1.88
ROD1YOR018W MTL1P53214 551 aa3.29□□□□□ -1.88
ROD1YOR018W PEX30Q06169 523 aa3.29□□□□□ -1.88
ROD1YOR018W YOL024WQ08172 172 aa3.29□□□□□ -1.88
ROD1YOR018W FEX1Q08913 375 aa3.29□□□□□ -1.88
ROD1YOR018W RDI1Q12434 202 aa3.29□□□□□ -1.88
ROD1YOR018W IZH2Q12442 317 aa3.29□□□□□ -1.88
ROD1YOR018W YOR192C-CQ3E736 78 aa3.29□□□□□ -1.88
ROD1YOR018W RPL30P14120 105 aaKnown RBP3.28□□□□□ -1.88
ROD1YOR018W HNM1P19807 563 aa3.28□□□□□ -1.88
ROD1YOR018W BUD23P25627 275 aaPredicted RBP3.28□□□□□ -1.88
ROD1YOR018W VMA5P31412 392 aaKnown RBP3.28□□□□□ -1.88
ROD1YOR018W CLG1P35190 452 aa3.28□□□□□ -1.88
ROD1YOR018W MCH2P36032 473 aa3.28□□□□□ -1.88
ROD1YOR018W APL3P38065 1025 aa3.28□□□□□ -1.88
ROD1YOR018W YMR262WP38430 313 aa3.28□□□□□ -1.88
ROD1YOR018W SEN34P39707 275 aa3.28□□□□□ -1.88
ROD1YOR018W UFD1P53044 361 aa3.28□□□□□ -1.88
ROD1YOR018W MTM1P53320 366 aa3.28□□□□□ -1.88
ROD1YOR018W ARG5,6Q01217 863 aa3.28□□□□□ -1.88
ROD1YOR018W YOR029WQ12243 111 aa3.28□□□□□ -1.88
ROD1YOR018W VMA22P38784 181 aa3.28□□□□□ -1.88
ROD1YOR018W SIP18P50263 79 aa3.28□□□□□ -1.88
ROD1YOR018W ARO8P53090 500 aaKnown RBP3.28□□□□□ -1.88
ROD1YOR018W VBA1Q04301 562 aa3.28□□□□□ -1.88
ROD1YOR018W GAT3Q07928 141 aa3.28□□□□□ -1.88
ROD1YOR018W EAF3Q12432 401 aa3.28□□□□□ -1.88
ROD1YOR018W YGL194C-AQ2V2P6 80 aa3.28□□□□□ -1.88
ROD1YOR018W TDH2P00358 332 aaKnown RBP3.27□□□□□ -1.89
ROD1YOR018W SPS2P08459 502 aa3.27□□□□□ -1.89
ROD1YOR018W URA6P15700 204 aa3.27□□□□□ -1.89
ROD1YOR018W SAR1P20606 190 aaKnown RBP3.27□□□□□ -1.89
ROD1YOR018W SAG1P20840 650 aa3.27□□□□□ -1.89
ROD1YOR018W AFG1P32317 509 aa3.27□□□□□ -1.89
ROD1YOR018W UTP30P36144 274 aaKnown RBP3.27□□□□□ -1.89
ROD1YOR018W YBR242WP38331 238 aa3.27□□□□□ -1.89
ROD1YOR018W AVT4P50944 713 aa3.27□□□□□ -1.89
ROD1YOR018W UBC13P52490 153 aa3.27□□□□□ -1.89
ROD1YOR018W GTF1P53260 183 aaPredicted RBP3.27□□□□□ -1.89
ROD1YOR018W SCW4P53334 386 aaKnown RBP3.27□□□□□ -1.89
ROD1YOR018W YDR387CQ04162 555 aa3.27□□□□□ -1.89
ROD1YOR018W BPH1P25356 2167 aa3.27□□□□□ -1.89
ROD1YOR018W TDH3P00359 332 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
ROD1YOR018W CDC28P00546 298 aaKnown RBP3.27□□□□□ -1.89
ROD1YOR018W SRL3P36167 246 aa3.27□□□□□ -1.89
ROD1YOR018W XBP1P40489 647 aa3.27□□□□□ -1.89
ROD1YOR018W SYS1P41544 203 aa3.27□□□□□ -1.89
ROD1YOR018W NSA1P53136 463 aaPredicted RBP3.27□□□□□ -1.89
ROD1YOR018W ALG9P53868 555 aaKnown RBP3.27□□□□□ -1.89
ROD1YOR018W NRK1P53915 240 aa3.27□□□□□ -1.89
ROD1YOR018W HHT1P61830 136 aa3.27□□□□□ -1.89
ROD1YOR018W RSM23Q01163 450 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms