RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W BXI1P48558 297 aa3.17□□□□□ -1.9
VPS27YNR006W YMR315WQ04869 349 aaKnown RBP3.17□□□□□ -1.9
VPS27YNR006W JID1Q12350 301 aa3.17□□□□□ -1.9
VPS27YNR006W RPO31P04051 1460 aa3.17□□□□□ -1.9
VPS27YNR006W YOR1P53049 1477 aa3.17□□□□□ -1.9
VPS27YNR006W SDH3P33421 198 aa3.16□□□□□ -1.9
VPS27YNR006W CLG1P35190 452 aa3.16□□□□□ -1.9
VPS27YNR006W HMT1P38074 348 aa3.16□□□□□ -1.9
VPS27YNR006W BAT1P38891 393 aaKnown RBP3.16□□□□□ -1.9
VPS27YNR006W SEO1P39709 593 aa3.16□□□□□ -1.9
VPS27YNR006W LIP2Q06005 328 aa3.16□□□□□ -1.9
VPS27YNR006W PET20Q99373 253 aa3.16□□□□□ -1.9
VPS27YNR006W YCF1P39109 1515 aaKnown RBP3.16□□□□□ -1.9
VPS27YNR006W PSK1P31374 1356 aa3.16□□□□□ -1.9
VPS27YNR006W MRPL39P36533 70 aa3.16□□□□□ -1.9
VPS27YNR006W YER076CP40049 302 aa3.16□□□□□ -1.9
VPS27YNR006W ICE2P40499 491 aa3.16□□□□□ -1.9
VPS27YNR006W YFL064CP43540 174 aa3.16□□□□□ -1.9
VPS27YNR006W YGL235WP53071 178 aa3.16□□□□□ -1.9
VPS27YNR006W AAH1P53909 347 aa3.16□□□□□ -1.9
VPS27YNR006W SPC2Q04969 178 aa3.16□□□□□ -1.9
VPS27YNR006W TY1B-HO13535 1793 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-DR5P0C2I2 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-DR6P0C2I3 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-LR2P0C2I5 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-LR3P0C2I6 1755 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W TY1B-PR1P0C2I9 1755 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W TY1B-PR2P0C2J0 1756 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-PR3P0C2J1 1755 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W TY1B-JR1P47098 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-ML2Q03434 1755 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W TY1B-ER1Q03612 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-ML1Q04711 1755 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W TY1B-BRQ12193 1756 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-GR2Q12269 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-OLQ12273 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-GR3Q12316 1755 aa3.15□□□□□ -1.91
VPS27YNR006W TY1B-PLQ12414 1755 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W TY1B-ORQ92393 1755 aa3.15□□□□□ -1.91
VPS27YNR006W MRS1P07266 363 aa3.15□□□□□ -1.91
VPS27YNR006W SEC4P07560 215 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W DPM1P14020 267 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W BGL2P15703 313 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W SOL2P37262 315 aa3.15□□□□□ -1.91
VPS27YNR006W RFS1P38234 210 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W STB1P42845 420 aa3.15□□□□□ -1.91
VPS27YNR006W NUP49Q02199 472 aa3.15□□□□□ -1.91
VPS27YNR006W GGA1Q06336 557 aa3.15□□□□□ -1.91
VPS27YNR006W SYC1Q08553 188 aaPredicted RBP3.15□□□□□ -1.91
VPS27YNR006W YOR283WQ12040 230 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W NSL1Q12143 216 aa3.15□□□□□ -1.91
VPS27YNR006W TOP2P06786 1428 aaKnown RBP3.15□□□□□ -1.91
VPS27YNR006W MLP2P40457 1679 aa3.14□□□□□ -1.91
VPS27YNR006W RPS24AP0CX31 135 aaKnown RBP3.14□□□□□ -1.91
VPS27YNR006W RPS24BP0CX32 135 aaKnown RBP3.14□□□□□ -1.91
VPS27YNR006W CUP2P15315 225 aa3.14□□□□□ -1.91
VPS27YNR006W TAH1P25638 111 aaPredicted RBP3.14□□□□□ -1.91
VPS27YNR006W IMP1P28627 190 aa3.14□□□□□ -1.91
VPS27YNR006W CAT2P32796 670 aaKnown RBP3.14□□□□□ -1.91
VPS27YNR006W SRP102P36057 244 aaPredicted RBP3.14□□□□□ -1.91
VPS27YNR006W ECM14P38836 430 aa3.14□□□□□ -1.91
VPS27YNR006W TIM17P39515 158 aa3.14□□□□□ -1.91
VPS27YNR006W YIL012WP40551 113 aa3.14□□□□□ -1.91
VPS27YNR006W FMP48P53233 369 aa3.14□□□□□ -1.91
VPS27YNR006W RMI1Q02685 241 aa3.14□□□□□ -1.91
VPS27YNR006W YDR248CQ03786 193 aa3.14□□□□□ -1.91
VPS27YNR006W PBA1Q05778 276 aa3.14□□□□□ -1.91
VPS27YNR006W NDD1Q08887 554 aa3.14□□□□□ -1.91
VPS27YNR006W RPL21BQ12672 160 aaKnown RBP3.14□□□□□ -1.91
VPS27YNR006W LSO2Q3E772 92 aaKnown RBP3.14□□□□□ -1.91
VPS27YNR006W ARO7P32178 256 aa3.13□□□□□ -1.91
VPS27YNR006W OXA1P39952 402 aa3.13□□□□□ -1.91
VPS27YNR006W RRG9P40156 214 aa3.13□□□□□ -1.91
VPS27YNR006W REE1P40893 198 aa3.13□□□□□ -1.91
VPS27YNR006W YGR018CP53211 109 aa3.13□□□□□ -1.91
VPS27YNR006W ELP3Q02908 557 aaKnown RBP3.13□□□□□ -1.91
VPS27YNR006W INM2Q05533 292 aa3.13□□□□□ -1.91
VPS27YNR006W BMH1P29311 267 aaKnown RBP3.13□□□□□ -1.91
VPS27YNR006W APS1P35181 156 aa3.13□□□□□ -1.91
VPS27YNR006W PTH1P38876 190 aaKnown RBP3.13□□□□□ -1.91
VPS27YNR006W EDC3P39998 551 aaKnown RBP3.13□□□□□ -1.91
VPS27YNR006W FAR7P43592 221 aa3.13□□□□□ -1.91
VPS27YNR006W UBC12P52491 188 aa3.13□□□□□ -1.91
VPS27YNR006W RNH201P53942 307 aa3.13□□□□□ -1.91
VPS27YNR006W YOL024WQ08172 172 aa3.13□□□□□ -1.91
VPS27YNR006W YLR050CQ12155 161 aaKnown RBP3.13□□□□□ -1.91
VPS27YNR006W TRM10Q12400 293 aa3.13□□□□□ -1.91
VPS27YNR006W MGT1P26188 188 aa3.12□□□□□ -1.91
VPS27YNR006W UBC8P28263 218 aa3.12□□□□□ -1.91
VPS27YNR006W SNQ2P32568 1501 aaKnown RBP3.12□□□□□ -1.91
VPS27YNR006W TIP20P33891 701 aa3.12□□□□□ -1.91
VPS27YNR006W POP7P38291 140 aa3.12□□□□□ -1.91
VPS27YNR006W ARN2P38724 620 aa3.12□□□□□ -1.91
VPS27YNR006W EFM1P38732 585 aa3.12□□□□□ -1.91
VPS27YNR006W NQM1P53228 333 aaPredicted RBP3.12□□□□□ -1.91
VPS27YNR006W ABF2Q02486 183 aa3.12□□□□□ -1.91
VPS27YNR006W MRX11Q03079 207 aa3.12□□□□□ -1.91
VPS27YNR006W GOT1Q03554 138 aa3.12□□□□□ -1.91
VPS27YNR006W YMR244WQ04018 355 aa3.12□□□□□ -1.91
VPS27YNR006W PAL1Q05518 499 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms