RNA–Protein interactions for RNA: YMR287C

DSS1, Transcript of 3'-5' exoribonuclease, yeast

Gene DSS1, Length 2,910 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSS1	YMR287C	RRP40	Q08285	240 aa	Known RBP	2.7	□□□□□ -1.98
DSS1	YMR287C	ISD11	Q6Q560	94 aa		2.7	□□□□□ -1.98
DSS1	YMR287C	YBR121C-A	P0C5L4	52 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	MGM101	P32787	269 aa	Known RBP	2.69	□□□□□ -1.98
DSS1	YMR287C	BRR6	P53062	197 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	YDR124W	Q04608	324 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	SNU23	Q12368	194 aa	Predicted RBP	2.69	□□□□□ -1.98
DSS1	YMR287C	YBL008W-A	Q3E821	79 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	YLR462W	O13556	202 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	TKL2	P33315	681 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	YEL075C	P39972	122 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	MIG2	P53035	382 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	GGA1	Q06336	557 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	IES3	Q12345	250 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	TUS1	Q06412	1307 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	BMH1	P29311	267 aa	Known RBP	2.69	□□□□□ -1.98
DSS1	YMR287C	MSA2	P36157	363 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	FAR8	Q05040	523 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	MRX4	Q12467	430 aa		2.69	□□□□□ -1.98
DSS1	YMR287C	NHP6B	P11633	99 aa	Known RBP	2.68	□□□□□ -1.98
DSS1	YMR287C	TCA17	P32613	152 aa		2.68	□□□□□ -1.98
DSS1	YMR287C	IKI1	P38874	309 aa		2.68	□□□□□ -1.98
DSS1	YMR287C	IRC18	P47056	224 aa		2.68	□□□□□ -1.98
DSS1	YMR287C	ALG9	P53868	555 aa	Known RBP	2.68	□□□□□ -1.98
DSS1	YMR287C	CHD1	P32657	1468 aa		2.68	□□□□□ -1.98
DSS1	YMR287C	YPK2	P18961	677 aa		2.67	□□□□□ -1.98
DSS1	YMR287C	TCD1	P38756	429 aa		2.67	□□□□□ -1.98
DSS1	YMR287C	NIP7	Q08962	181 aa	Known RBP	2.67	□□□□□ -1.98
DSS1	YMR287C	ASF2	P32448	525 aa	Predicted RBP	2.67	□□□□□ -1.98
DSS1	YMR287C	CUE1	P38428	203 aa		2.67	□□□□□ -1.98
DSS1	YMR287C	ABP140	Q08641	628 aa	Known RBP	2.67	□□□□□ -1.98
DSS1	YMR287C	QCR7	P00128	127 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	RAD10	P06838	210 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	STE18	P18852	110 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	AST1	P35183	429 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	RPF1	P38805	295 aa	Known RBP	2.66	□□□□□ -1.98
DSS1	YMR287C	YJR146W	P47174	117 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	NOP19	P53317	196 aa	Predicted RBP	2.66	□□□□□ -1.98
DSS1	YMR287C	GET4	Q12125	312 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	SIR4	P11978	1358 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	COG3	P40094	801 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	ADO1	P47143	340 aa	Known RBP	2.66	□□□□□ -1.98
DSS1	YMR287C	ERV29	P53337	310 aa		2.66	□□□□□ -1.98
DSS1	YMR287C	RHO3	Q00245	231 aa	Known RBP	2.66	□□□□□ -1.98
DSS1	YMR287C	URA6	P15700	204 aa		2.65	□□□□□ -1.98
DSS1	YMR287C	SCO1	P23833	295 aa		2.65	□□□□□ -1.98
DSS1	YMR287C	SGE1	P33335	543 aa		2.65	□□□□□ -1.98
DSS1	YMR287C	TIF34	P40217	347 aa	Known RBP	2.65	□□□□□ -1.98
DSS1	YMR287C	YIL059C	P40520	121 aa		2.65	□□□□□ -1.98
DSS1	YMR287C	YPR195C	Q06594	109 aa		2.65	□□□□□ -1.98
DSS1	YMR287C	KRE1	P17260	313 aa		2.65	□□□□□ -1.99
DSS1	YMR287C	PRE6	P40303	254 aa	Known RBP	2.65	□□□□□ -1.99
DSS1	YMR287C	ECO1	P43605	281 aa		2.65	□□□□□ -1.99
DSS1	YMR287C	NUP57	P48837	541 aa		2.65	□□□□□ -1.99
DSS1	YMR287C	SSQ1	Q05931	657 aa	Predicted RBP	2.65	□□□□□ -1.99
DSS1	YMR287C	YNG1	Q08465	219 aa		2.65	□□□□□ -1.99
DSS1	YMR287C	GRX2	P17695	143 aa	Known RBP	2.65	□□□□□ -1.99
DSS1	YMR287C	YCR087C-A	P37263	153 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	ECM33	P38248	429 aa	Known RBP	2.64	□□□□□ -1.99
DSS1	YMR287C	GTR2	P53290	341 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	APJ1	P53940	528 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	GRH1	Q04410	372 aa	Known RBP	2.64	□□□□□ -1.99
DSS1	YMR287C	YLR179C	Q06252	201 aa	Known RBP	2.64	□□□□□ -1.99
DSS1	YMR287C	Q0255	P03881	472 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	FMT1	P32785	401 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	CAT5	P41735	233 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	RSM27	P53305	110 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	PDR17	P53844	350 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	VPS68	Q12016	184 aa		2.64	□□□□□ -1.99
DSS1	YMR287C	YPT52	P36018	234 aa	Known RBP	2.63	□□□□□ -1.99
DSS1	YMR287C	GON7	P46984	123 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	RPL26A	P05743	127 aa	Known RBP	2.63	□□□□□ -1.99
DSS1	YMR287C	CCA1	P21269	546 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	BMT5	P40493	336 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	YJL144W	P47009	104 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	RPL26B	P53221	127 aa	Known RBP	2.63	□□□□□ -1.99
DSS1	YMR287C	GOT1	Q03554	138 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	INM2	Q05533	292 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	HRT1	Q08273	121 aa		2.63	□□□□□ -1.99
DSS1	YMR287C	CDC28	P00546	298 aa	Known RBP	2.62	□□□□□ -1.99
DSS1	YMR287C	IPP1	P00817	287 aa	Known RBP	2.62	□□□□□ -1.99
DSS1	YMR287C	DBF2	P22204	572 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	RNP1	P32385	249 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	ERG10	P41338	398 aa	Known RBP	2.62	□□□□□ -1.99
DSS1	YMR287C	SSU72	P53538	206 aa	Predicted RBP	2.62	□□□□□ -1.99
DSS1	YMR287C	OAC1	P32332	324 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	MRPL39	P36533	70 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	COX15	P40086	486 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	BNA7	Q04066	261 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	PEX12	Q04370	399 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	QCR6	P00127	147 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	RSA4	P25382	515 aa	Known RBP	2.62	□□□□□ -1.99
DSS1	YMR287C	SEC17	P32602	292 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	SSO1	P32867	290 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	RFC4	P40339	323 aa	Known RBP	2.62	□□□□□ -1.99
DSS1	YMR287C	YGL088W	P53151	121 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	YMR279C	Q03263	540 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	JLP1	Q12358	412 aa		2.62	□□□□□ -1.99
DSS1	YMR287C	REP2	P03872	296 aa		2.61	□□□□□ -1.99
DSS1	YMR287C	ERG24	P32462	438 aa	Known RBP	2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms