RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W KIN28P06242 306 aa1.6□□□□□ -2.15
RTP1YMR185W QCR2P07257 368 aa1.6□□□□□ -2.15
RTP1YMR185W RPB3P16370 318 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NUP1P20676 1076 aa1.6□□□□□ -2.15
RTP1YMR185W PDE1P22434 369 aa1.6□□□□□ -2.15
RTP1YMR185W PPH21P23594 369 aa1.6□□□□□ -2.15
RTP1YMR185W MIR1P23641 311 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W POP5P28005 173 aa1.6□□□□□ -2.15
RTP1YMR185W LAC1P28496 418 aa1.6□□□□□ -2.15
RTP1YMR185W DBF20P32328 564 aa1.6□□□□□ -2.15
RTP1YMR185W SRB5P32585 307 aa1.6□□□□□ -2.15
RTP1YMR185W SUI1P32911 108 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SNC2P33328 115 aa1.6□□□□□ -2.15
RTP1YMR185W TRM7P38238 310 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SLM6P38343 150 aa1.6□□□□□ -2.15
RTP1YMR185W ANS1P38832 159 aa1.6□□□□□ -2.15
RTP1YMR185W WSS1P38838 269 aa1.6□□□□□ -2.15
RTP1YMR185W PZF1P39933 429 aa1.6□□□□□ -2.15
RTP1YMR185W AZF1P41696 914 aa1.6□□□□□ -2.15
RTP1YMR185W YJR120WP47157 116 aa1.6□□□□□ -2.15
RTP1YMR185W UFD1P53044 361 aa1.6□□□□□ -2.15
RTP1YMR185W ERG25P53045 309 aa1.6□□□□□ -2.15
RTP1YMR185W YGR042WP53227 271 aa1.6□□□□□ -2.15
RTP1YMR185W LEE1Q02799 301 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W PNG1Q02890 363 aa1.6□□□□□ -2.15
RTP1YMR185W ERP1Q05359 219 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NMA1Q06178 401 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W YLR456WQ06199 204 aa1.6□□□□□ -2.15
RTP1YMR185W PIN3Q06449 215 aa1.6□□□□□ -2.15
RTP1YMR185W MHR1Q06630 226 aa1.6□□□□□ -2.15
RTP1YMR185W PFA4Q12006 378 aa1.6□□□□□ -2.15
RTP1YMR185W RAD28Q12021 506 aa1.6□□□□□ -2.15
RTP1YMR185W YOR114WQ12219 294 aa1.6□□□□□ -2.15
RTP1YMR185W VAM3Q12241 283 aa1.6□□□□□ -2.15
RTP1YMR185W YOP1Q12402 180 aa1.6□□□□□ -2.15
RTP1YMR185W ODC2Q99297 307 aa1.6□□□□□ -2.15
RTP1YMR185W ATP5P09457 212 aa1.6□□□□□ -2.15
RTP1YMR185W ADH7P25377 361 aa1.6□□□□□ -2.15
RTP1YMR185W RFA3P26755 122 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NTF2P33331 125 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SLC1P33333 303 aa1.6□□□□□ -2.15
RTP1YMR185W PAD1P33751 242 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
RTP1YMR185W SSS1P35179 80 aa1.6□□□□□ -2.15
RTP1YMR185W SRP102P36057 244 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W PAN3P36102 679 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W MRPL15P36523 253 aa1.6□□□□□ -2.15
RTP1YMR185W YBR013CP38215 129 aa1.6□□□□□ -2.15
RTP1YMR185W HSP10P38910 106 aa1.6□□□□□ -2.15
RTP1YMR185W OSW5P40219 148 aa1.6□□□□□ -2.15
RTP1YMR185W RFC2P40348 353 aa1.6□□□□□ -2.15
RTP1YMR185W SMD3P43321 101 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W NIT2P47016 307 aa1.6□□□□□ -2.15
RTP1YMR185W YJR056CP47115 236 aa1.6□□□□□ -2.15
RTP1YMR185W SEH1P53011 349 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W YGL185CP53100 379 aa1.6□□□□□ -2.15
RTP1YMR185W YGR066CP53242 292 aa1.6□□□□□ -2.15
RTP1YMR185W HOL1P53389 586 aa1.6□□□□□ -2.15
RTP1YMR185W OGG1P53397 376 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W YIF1P53845 314 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W TDA7P53882 636 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W REC102Q02721 264 aa1.6□□□□□ -2.15
RTP1YMR185W RTT103Q05543 409 aa1.6□□□□□ -2.15
RTP1YMR185W SRL2Q12020 392 aa1.6□□□□□ -2.15
RTP1YMR185W FCF2Q12035 217 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W MCP1Q12106 302 aa1.6□□□□□ -2.15
RTP1YMR185W FYV7Q12247 151 aa1.6□□□□□ -2.15
RTP1YMR185W YDR262WQ12331 272 aa1.6□□□□□ -2.15
RTP1YMR185W SWM1Q12379 170 aa1.6□□□□□ -2.15
RTP1YMR185W YLR111WQ12528 110 aa1.6□□□□□ -2.15
RTP1YMR185W YJR112W-AQ3E743 109 aa1.6□□□□□ -2.15
RTP1YMR185W FLO9P39712 1322 aa1.6□□□□□ -2.15
RTP1YMR185W RPL31AP0C2H8 113 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W RPL31BP0C2H9 113 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W FRS1P15624 595 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W CDC43P18898 376 aa1.6□□□□□ -2.15
RTP1YMR185W EHD3P28817 500 aa1.6□□□□□ -2.15
RTP1YMR185W PRE2P30656 287 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W MDH3P32419 343 aaKnown RBP RIP-Chip data1.6□□□□□ -2.15not detected
RTP1YMR185W ECM34P38728 170 aa1.6□□□□□ -2.15
RTP1YMR185W FLX1P40464 311 aa1.6□□□□□ -2.15
RTP1YMR185W MOB2P43563 287 aa1.6□□□□□ -2.15
RTP1YMR185W YJL016WP47072 561 aa1.6□□□□□ -2.15
RTP1YMR185W BXI1P48558 297 aa1.6□□□□□ -2.15
RTP1YMR185W YGL262WP53054 175 aa1.6□□□□□ -2.15
RTP1YMR185W RMD9P53140 646 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W SLX9P53251 210 aaPredicted RBP1.6□□□□□ -2.15
RTP1YMR185W RHO5P53879 331 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W CYT2Q00873 224 aa1.6□□□□□ -2.15
RTP1YMR185W CAB5Q03941 241 aa1.6□□□□□ -2.15
RTP1YMR185W THI74Q04083 370 aa1.6□□□□□ -2.15
RTP1YMR185W MRX8Q05473 314 aa1.6□□□□□ -2.15
RTP1YMR185W MRX9Q07349 420 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W BSC6Q08280 497 aa1.6□□□□□ -2.15
RTP1YMR185W IRC13Q08630 104 aa1.6□□□□□ -2.15
RTP1YMR185W SRO7Q12038 1033 aa1.6□□□□□ -2.15
RTP1YMR185W ATX2Q12067 313 aa1.6□□□□□ -2.15
RTP1YMR185W YDL085C-AQ3E7B7 68 aaKnown RBP1.6□□□□□ -2.15
RTP1YMR185W CCH1P50077 2039 aa1.59□□□□□ -2.15
RTP1YMR185W CDC28P00546 298 aaKnown RBP1.59□□□□□ -2.15
RTP1YMR185W OPI3P05375 206 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms