RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C SYS1P41544 203 aa2.38□□□□□ -2.03
SUB1YMR039C NIF3P53081 288 aa2.38□□□□□ -2.03
SUB1YMR039C CAX4P53223 239 aa2.38□□□□□ -2.03
SUB1YMR039C RSM27P53305 110 aa2.38□□□□□ -2.03
SUB1YMR039C NOP19P53317 196 aaPredicted RBP2.38□□□□□ -2.03
SUB1YMR039C YML108WQ03759 105 aa2.38□□□□□ -2.03
SUB1YMR039C TVP15Q03860 143 aa2.38□□□□□ -2.03
SUB1YMR039C YDR222WQ04925 415 aa2.38□□□□□ -2.03
SUB1YMR039C YOR186WQ08560 144 aa2.38□□□□□ -2.03
SUB1YMR039C SMT3Q12306 101 aaKnown RBP2.38□□□□□ -2.03
SUB1YMR039C CMC2Q3E7A4 109 aa2.38□□□□□ -2.03
SUB1YMR039C RAD9P14737 1309 aa2.38□□□□□ -2.03
SUB1YMR039C SIR4P11978 1358 aa2.37□□□□□ -2.03
SUB1YMR039C QCR7P00128 127 aa2.37□□□□□ -2.03
SUB1YMR039C CUP2P15315 225 aa2.37□□□□□ -2.03
SUB1YMR039C URA6P15700 204 aa2.37□□□□□ -2.03
SUB1YMR039C ERD2P18414 219 aa2.37□□□□□ -2.03
SUB1YMR039C PPH21P23594 369 aa2.37□□□□□ -2.03
SUB1YMR039C SSH1P38353 490 aaKnown RBP2.37□□□□□ -2.03
SUB1YMR039C ARN2P38724 620 aa2.37□□□□□ -2.03
SUB1YMR039C ILM1P47155 203 aa2.37□□□□□ -2.03
SUB1YMR039C ALG13P53178 202 aa2.37□□□□□ -2.03
SUB1YMR039C YNL046WP53956 172 aa2.37□□□□□ -2.03
SUB1YMR039C SMD1Q02260 146 aaPredicted RBP2.37□□□□□ -2.03
SUB1YMR039C YBL008W-AQ3E821 79 aa2.37□□□□□ -2.03
SUB1YMR039C YCL012CQ8J0M4 134 aa2.37□□□□□ -2.03
SUB1YMR039C YEL009C-AA0A023PZF2 135 aa2.36□□□□□ -2.03
SUB1YMR039C MET2P08465 486 aa2.36□□□□□ -2.03
SUB1YMR039C CPT1P17898 393 aa2.36□□□□□ -2.03
SUB1YMR039C RPB9P27999 122 aa2.36□□□□□ -2.03
SUB1YMR039C YCR087C-AP37263 153 aa2.36□□□□□ -2.03
SUB1YMR039C TEM1P38987 245 aa2.36□□□□□ -2.03
SUB1YMR039C BMT5P40493 336 aa2.36□□□□□ -2.03
SUB1YMR039C YJR141WP47172 347 aaPredicted RBP2.36□□□□□ -2.03
SUB1YMR039C RMR1P53060 241 aa2.36□□□□□ -2.03
SUB1YMR039C FAR8Q05040 523 aa2.36□□□□□ -2.03
SUB1YMR039C YPL150WQ12152 901 aa2.36□□□□□ -2.03
SUB1YMR039C ATG5Q12380 294 aa2.36□□□□□ -2.03
SUB1YMR039C TUS1Q06412 1307 aa2.36□□□□□ -2.03
SUB1YMR039C VPS51P36116 164 aa2.35□□□□□ -2.03
SUB1YMR039C SEC72P39742 193 aaKnown RBP2.35□□□□□ -2.03
SUB1YMR039C OST3P48439 350 aa2.35□□□□□ -2.03
SUB1YMR039C TOS8P53147 276 aa2.35□□□□□ -2.03
SUB1YMR039C OSH6Q02201 448 aa2.35□□□□□ -2.03
SUB1YMR039C GGA1Q06336 557 aa2.35□□□□□ -2.03
SUB1YMR039C YET3Q07451 203 aa2.35□□□□□ -2.03
SUB1YMR039C GPM2Q12008 311 aa2.35□□□□□ -2.03
SUB1YMR039C MRX4Q12467 430 aa2.35□□□□□ -2.03
SUB1YMR039C ISD11Q6Q560 94 aa2.35□□□□□ -2.03
SUB1YMR039C DRS2P39524 1355 aa2.35□□□□□ -2.03
SUB1YMR039C NUP157P40064 1391 aaKnown RBP2.35□□□□□ -2.03
SUB1YMR039C YOL163WP0CF20 169 aa2.34□□□□□ -2.03
SUB1YMR039C SFC1P33303 322 aa2.34□□□□□ -2.03
SUB1YMR039C ECM13P38195 257 aa2.34□□□□□ -2.03
SUB1YMR039C TRM7P38238 310 aaKnown RBP2.34□□□□□ -2.03
SUB1YMR039C YER189WP40104 122 aa2.34□□□□□ -2.03
SUB1YMR039C PEX17P40155 199 aa2.34□□□□□ -2.03
SUB1YMR039C YJL028WP47062 111 aa2.34□□□□□ -2.03
SUB1YMR039C BXI1P48558 297 aa2.34□□□□□ -2.03
SUB1YMR039C PDR17P53844 350 aa2.34□□□□□ -2.03
SUB1YMR039C YPL039WQ03080 316 aa2.34□□□□□ -2.03
SUB1YMR039C YMR279CQ03263 540 aa2.34□□□□□ -2.03
SUB1YMR039C GIM5Q04493 163 aa2.34□□□□□ -2.03
SUB1YMR039C FUS2Q05670 677 aa2.34□□□□□ -2.03
SUB1YMR039C SLD7Q08457 257 aa2.34□□□□□ -2.03
SUB1YMR039C TIM22Q12328 207 aa2.34□□□□□ -2.03
SUB1YMR039C LSO2Q3E772 92 aaKnown RBP2.34□□□□□ -2.03
SUB1YMR039C COX5AP00424 153 aa2.33□□□□□ -2.04
SUB1YMR039C RPS23AP0CX29 145 aaKnown RBP2.33□□□□□ -2.04
SUB1YMR039C RPS23BP0CX30 145 aa2.33□□□□□ -2.04
SUB1YMR039C YAK1P14680 807 aa2.33□□□□□ -2.04
SUB1YMR039C APS1P35181 156 aa2.33□□□□□ -2.04
SUB1YMR039C MAK5P38112 773 aaPredicted RBP2.33□□□□□ -2.04
SUB1YMR039C SPL2P38839 148 aa2.33□□□□□ -2.04
SUB1YMR039C SUR2P38992 349 aa2.33□□□□□ -2.04
SUB1YMR039C MMS2P53152 137 aa2.33□□□□□ -2.04
SUB1YMR039C YGL034CP53186 121 aa2.33□□□□□ -2.04
SUB1YMR039C DID2P69771 204 aa2.33□□□□□ -2.04
SUB1YMR039C YDR248CQ03786 193 aa2.33□□□□□ -2.04
SUB1YMR039C EMP46Q12396 444 aa2.33□□□□□ -2.04
SUB1YMR039C ZWF1P11412 505 aaKnown RBP2.32□□□□□ -2.04
SUB1YMR039C GCN3P14741 305 aa2.32□□□□□ -2.04
SUB1YMR039C SNF6P18888 332 aa2.32□□□□□ -2.04
SUB1YMR039C SEC22P22214 214 aa2.32□□□□□ -2.04
SUB1YMR039C PRE7P23724 241 aaKnown RBP2.32□□□□□ -2.04
SUB1YMR039C RNP1P32385 249 aa2.32□□□□□ -2.04
SUB1YMR039C SRY1P36007 326 aa2.32□□□□□ -2.04
SUB1YMR039C YPT52P36018 234 aaKnown RBP2.32□□□□□ -2.04
SUB1YMR039C CAF4P36130 643 aa2.32□□□□□ -2.04
SUB1YMR039C SDH4P37298 181 aa2.32□□□□□ -2.04
SUB1YMR039C YBL081WP38180 368 aaKnown RBP2.32□□□□□ -2.04
SUB1YMR039C SHG1P38337 142 aa2.32□□□□□ -2.04
SUB1YMR039C FAR7P43592 221 aa2.32□□□□□ -2.04
SUB1YMR039C YJL016WP47072 561 aa2.32□□□□□ -2.04
SUB1YMR039C PRM8P53174 237 aa2.32□□□□□ -2.04
SUB1YMR039C EMI1Q04406 187 aa2.32□□□□□ -2.04
SUB1YMR039C BRX1Q08235 291 aaKnown RBP2.32□□□□□ -2.04
SUB1YMR039C YNG1Q08465 219 aa2.32□□□□□ -2.04
SUB1YMR039C GRE1Q08969 168 aa2.32□□□□□ -2.04
SUB1YMR039C YPL264CQ08980 353 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms