RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W FKS1P38631 1876 aaKnown RBP2.57□□□□□ -2
SPO20YMR017W YKL075CP36083 450 aa2.57□□□□□ -2
SPO20YMR017W YHR125WP38831 101 aa2.57□□□□□ -2
SPO20YMR017W PET117Q02771 107 aa2.57□□□□□ -2
SPO20YMR017W YPR172WQ06608 200 aa2.57□□□□□ -2
SPO20YMR017W MHT1Q12525 324 aa2.57□□□□□ -2
SPO20YMR017W PUT1P09368 476 aa2.56□□□□□ -2
SPO20YMR017W NRG2P38082 220 aa2.56□□□□□ -2
SPO20YMR017W YJL027CP47063 138 aaPredicted RBP2.56□□□□□ -2
SPO20YMR017W INM2Q05533 292 aa2.56□□□□□ -2
SPO20YMR017W YLR126CQ12288 251 aa2.56□□□□□ -2
SPO20YMR017W COX5AP00424 153 aa2.55□□□□□ -2
SPO20YMR017W LDB7P38210 180 aa2.55□□□□□ -2
SPO20YMR017W GTR2P53290 341 aa2.55□□□□□ -2
SPO20YMR017W YMR279CQ03263 540 aa2.55□□□□□ -2
SPO20YMR017W KOG1P38873 1557 aa2.54□□□□□ -2
SPO20YMR017W SSN2P38931 1420 aa2.54□□□□□ -2
SPO20YMR017W CFT1Q06632 1357 aaKnown RBP2.54□□□□□ -2
SPO20YMR017W IPP1P00817 287 aaKnown RBP2.54□□□□□ -2
SPO20YMR017W DSF1P0CX08 502 aa2.54□□□□□ -2
SPO20YMR017W YNR073CP0CX09 502 aa2.54□□□□□ -2
SPO20YMR017W ERD2P18414 219 aa2.54□□□□□ -2
SPO20YMR017W YCR016WP25617 290 aaKnown RBP2.54□□□□□ -2
SPO20YMR017W DOA4P32571 926 aa2.54□□□□□ -2
SPO20YMR017W CTR2P38865 189 aa2.54□□□□□ -2
SPO20YMR017W YMR144WP40214 342 aaKnown RBP2.54□□□□□ -2
SPO20YMR017W RMR1P53060 241 aa2.54□□□□□ -2
SPO20YMR017W YGR026WP53217 278 aa2.54□□□□□ -2
SPO20YMR017W DCR2Q05924 578 aa2.54□□□□□ -2
SPO20YMR017W AKR2Q12013 749 aa2.54□□□□□ -2
SPO20YMR017W YHR086W-AQ3E746 53 aa2.54□□□□□ -2
SPO20YMR017W HIR3P47171 1648 aa2.53□□□□□ -2
SPO20YMR017W MSN4P33749 630 aa2.53□□□□□ -2
SPO20YMR017W MSA1Q08471 629 aa2.53□□□□□ -2
SPO20YMR017W YPL257WQ08974 193 aa2.53□□□□□ -2
SPO20YMR017W YPL229WQ99395 206 aa2.53□□□□□ -2
SPO20YMR017W THO2P53552 1597 aaKnown RBP2.53□□□□□ -2.01
SPO20YMR017W RPO26P20435 155 aa2.52□□□□□ -2.01
SPO20YMR017W MRPL25P23369 157 aa2.52□□□□□ -2.01
SPO20YMR017W RPS5P26783 225 aaKnown RBP2.52□□□□□ -2.01
SPO20YMR017W YPT52P36018 234 aaKnown RBP2.52□□□□□ -2.01
SPO20YMR017W FCY21P40039 528 aa2.52□□□□□ -2.01
SPO20YMR017W FIS1P40515 155 aa2.52□□□□□ -2.01
SPO20YMR017W HTL1Q9URQ5 78 aa2.52□□□□□ -2.01
SPO20YMR017W ADH3P07246 375 aaKnown RBP2.51□□□□□ -2.01
SPO20YMR017W SRB4P32569 687 aa2.51□□□□□ -2.01
SPO20YMR017W LIA1P47120 325 aaKnown RBP2.51□□□□□ -2.01
SPO20YMR017W NUP84P52891 726 aa2.51□□□□□ -2.01
SPO20YMR017W PRM15Q03262 622 aa2.51□□□□□ -2.01
SPO20YMR017W YLR283WQ05867 314 aa2.51□□□□□ -2.01
SPO20YMR017W DNA2P38859 1522 aa2.51□□□□□ -2.01
SPO20YMR017W SIR4P11978 1358 aa2.5□□□□□ -2.01
SPO20YMR017W MATALPHA1P0CY06 175 aa2.5□□□□□ -2.01
SPO20YMR017W HMLALPHA1P0CY07 175 aa2.5□□□□□ -2.01
SPO20YMR017W SNA3P14359 133 aa2.5□□□□□ -2.01
SPO20YMR017W CUE1P38428 203 aa2.5□□□□□ -2.01
SPO20YMR017W CAT5P41735 233 aa2.5□□□□□ -2.01
SPO20YMR017W HAM1P47119 197 aaKnown RBP2.5□□□□□ -2.01
SPO20YMR017W XRN1P22147 1528 aaKnown RBP2.49□□□□□ -2.01
SPO20YMR017W YAR068WP39564 161 aa2.49□□□□□ -2.01
SPO20YMR017W RPA43P46669 326 aa2.49□□□□□ -2.01
SPO20YMR017W YJR056CP47115 236 aa2.49□□□□□ -2.01
SPO20YMR017W ILM1P47155 203 aa2.49□□□□□ -2.01
SPO20YMR017W ATG39Q06159 398 aa2.49□□□□□ -2.01
SPO20YMR017W NIP7Q08962 181 aaKnown RBP2.49□□□□□ -2.01
SPO20YMR017W ESP1Q03018 1630 aa2.49□□□□□ -2.01
SPO20YMR017W REV3P14284 1504 aa2.48□□□□□ -2.01
SPO20YMR017W DOG1P38774 246 aa2.48□□□□□ -2.01
SPO20YMR017W YJR149WP47177 404 aa2.48□□□□□ -2.01
SPO20YMR017W DAD3P69850 94 aa2.48□□□□□ -2.01
SPO20YMR017W YOR020W-AQ3E824 90 aa2.48□□□□□ -2.01
SPO20YMR017W SIN3P22579 1536 aa2.47□□□□□ -2.01
SPO20YMR017W VMA11P32842 164 aa2.47□□□□□ -2.01
SPO20YMR017W RIB1P38066 345 aa2.47□□□□□ -2.01
SPO20YMR017W RPF1P38805 295 aaKnown RBP2.47□□□□□ -2.01
SPO20YMR017W MCM22P47167 239 aa2.47□□□□□ -2.01
SPO20YMR017W TRM9P49957 279 aa2.47□□□□□ -2.01
SPO20YMR017W NOP13P53883 403 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
SPO20YMR017W ATO3Q12359 275 aa2.47□□□□□ -2.01
SPO20YMR017W MYO2P19524 1574 aaKnown RBP2.47□□□□□ -2.01
SPO20YMR017W SSK2P53599 1579 aa2.47□□□□□ -2.01
SPO20YMR017W RPL9AP05738 191 aaKnown RBP2.46□□□□□ -2.02
SPO20YMR017W GRX2P17695 143 aaKnown RBP2.46□□□□□ -2.02
SPO20YMR017W PEX4P29340 183 aa2.46□□□□□ -2.02
SPO20YMR017W VPS21P36017 210 aaKnown RBP2.46□□□□□ -2.02
SPO20YMR017W YER085CP40058 173 aa2.46□□□□□ -2.02
SPO20YMR017W RPC17P47076 161 aa2.46□□□□□ -2.02
SPO20YMR017W RPL9BP51401 191 aaKnown RBP2.46□□□□□ -2.02
SPO20YMR017W ATG2P53855 1592 aa2.45□□□□□ -2.02
SPO20YMR017W YHR139C-AO13536 103 aa2.45□□□□□ -2.02
SPO20YMR017W BCY1P07278 416 aaKnown RBP2.45□□□□□ -2.02
SPO20YMR017W FCY2P17064 533 aa2.45□□□□□ -2.02
SPO20YMR017W CDC10P25342 322 aaKnown RBP2.45□□□□□ -2.02
SPO20YMR017W NTF2P33331 125 aaKnown RBP2.45□□□□□ -2.02
SPO20YMR017W PEX17P40155 199 aa2.45□□□□□ -2.02
SPO20YMR017W NSA1P53136 463 aaPredicted RBP2.45□□□□□ -2.02
SPO20YMR017W TOS8P53147 276 aa2.45□□□□□ -2.02
SPO20YMR017W MRPS8Q03799 155 aa2.45□□□□□ -2.02
SPO20YMR017W YML096WQ04489 525 aa2.45□□□□□ -2.02
SPO20YMR017W MSW1P04803 379 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 94.8 ms