RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR3, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR3	YLR411W	YDR541C	Q03049	344 aa		4.65	□□□□□ -1.67
CTR3	YLR411W	YMR252C	Q04814	134 aa		4.65	□□□□□ -1.67
CTR3	YLR411W	NOC4	Q06512	552 aa	Predicted RBP	4.65	□□□□□ -1.67
CTR3	YLR411W	SKS1	Q12505	502 aa		4.65	□□□□□ -1.67
CTR3	YLR411W	MATALPHA1	P0CY06	175 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	HMLALPHA1	P0CY07	175 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	CPR4	P25334	318 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	BUB3	P26449	341 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	ERG24	P32462	438 aa	Known RBP	4.64	□□□□□ -1.67
CTR3	YLR411W	TCM62	P38228	572 aa	Known RBP	4.64	□□□□□ -1.67
CTR3	YLR411W	SDS24	P38314	527 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	PGD1	P40356	397 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	GTT1	P40582	234 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	SFH5	P47008	294 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	TAD2	P47058	250 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	LSM8	P47093	109 aa	Known RBP	4.64	□□□□□ -1.67
CTR3	YLR411W	CGR1	P53188	120 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	FMP48	P53233	369 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	YPR172W	Q06608	200 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	YOR114W	Q12219	294 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	YJR112W-A	Q3E743	109 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	YOS9	Q99220	542 aa		4.64	□□□□□ -1.67
CTR3	YLR411W	PHO2	P07269	559 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	PET494	P07390	489 aa	Predicted RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	SSA3	P09435	649 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	MRS3	P10566	314 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	ZRC1	P20107	442 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	APA2	P22108	325 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	IFM1	P25038	676 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	SUI1	P32911	108 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	ARC19	P33204	171 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	MSN4	P33749	630 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	SEF1	P34228	1148 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	GPX1	P36014	167 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	YKL071W	P36086	256 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	ATP3	P38077	311 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	PEX32	P38292	413 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	YHR210C	P38893	341 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	PRP39	P39682	629 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	RMD6	P39975	231 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	RPL13B	P40212	199 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	MRX5	P47007	382 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	SNN1	P48232	102 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	MTM1	P53320	366 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	CRZ1	P53968	678 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	RHO3	Q00245	231 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	SNX41	Q04053	625 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	RPC11	Q04307	110 aa	Predicted RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	SMA2	Q04658	369 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	MRPL51	Q06090	140 aa	Predicted RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	YPR091C	Q06833	770 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	BRX1	Q08235	291 aa	Known RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	YOR365C	Q08844	703 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	YPR063C	Q12160	140 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	SET6	Q12529	373 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	RPL13A	Q12690	199 aa	Predicted RBP	4.63	□□□□□ -1.67
CTR3	YLR411W	YMR230W-A	Q3E7B5	62 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	VMA9	Q3E7B6	73 aa		4.63	□□□□□ -1.67
CTR3	YLR411W	YLR422W	Q06409	1932 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	TDH2	P00358	332 aa	Known RBP	4.62	□□□□□ -1.67
CTR3	YLR411W	SEC62	P21825	274 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	COS9	P36034	407 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	MRPL27	P36526	146 aa	Predicted RBP	4.62	□□□□□ -1.67
CTR3	YLR411W	CHK1	P38147	527 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	ERV15	P38312	142 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	MTC4	P38335	694 aa	Known RBP	4.62	□□□□□ -1.67
CTR3	YLR411W	TRR2	P38816	342 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	SEN34	P39707	275 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	VPS52	P39904	641 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
CTR3	YLR411W	MOG1	P47123	218 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	TOS2	P50078	622 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	YGL159W	P53110	370 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	CDH1	P53197	566 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	RSM27	P53305	110 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	ATG10	Q07879	167 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	TMS1	Q12116	473 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	PCC1	Q3E833	88 aa		4.62	□□□□□ -1.67
CTR3	YLR411W	CDC7	P06243	507 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	ADK1	P07170	222 aa	Known RBP	4.61	□□□□□ -1.67
CTR3	YLR411W	ELO2	P25358	347 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	TIM12	P32830	109 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	PRS3	P38689	320 aa	Known RBP	4.61	□□□□□ -1.67
CTR3	YLR411W	MOB1	P40484	314 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	AVT7	P40501	490 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	PAM16	P42949	149 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	IKS1	P47042	667 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	NIF3	P53081	288 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	PNC1	P53184	216 aa	Known RBP	4.61	□□□□□ -1.67
CTR3	YLR411W	YGR066C	P53242	292 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	FYV6	P53913	173 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	YCL001W-A	P87012	153 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	BNA7	Q04066	261 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	NNT1	Q05874	261 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	MDM30	Q05930	598 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	YTH1	Q06102	208 aa	Predicted RBP	4.61	□□□□□ -1.67
CTR3	YLR411W	TAZ1	Q06510	381 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	MMT2	Q08970	484 aa		4.61	□□□□□ -1.67
CTR3	YLR411W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.61	□□□□□ -1.67
CTR3	YLR411W	UBR1	P19812	1950 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms