RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YJR149W	P47177	404 aa		3.79	□□□□□ -1.8
RSA3	YLR221C	SYF2	P53277	215 aa	Predicted RBP	3.79	□□□□□ -1.8
RSA3	YLR221C	FAR8	Q05040	523 aa		3.79	□□□□□ -1.8
RSA3	YLR221C	IPP1	P00817	287 aa	Known RBP	3.78	□□□□□ -1.8
RSA3	YLR221C	YGP1	P38616	354 aa	Known RBP	3.78	□□□□□ -1.8
RSA3	YLR221C	COS8	P38723	381 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	ERG28	P40030	148 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	YER084W	P40057	128 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	HAM1	P47119	197 aa	Known RBP	3.78	□□□□□ -1.8
RSA3	YLR221C	YPR172W	Q06608	200 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	HEM25	Q07534	307 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	YOR268C	Q08734	132 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	ADF1	Q2V2Q1	113 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	YKL183C-A	Q3E765	70 aa		3.78	□□□□□ -1.8
RSA3	YLR221C	SGA1	P08019	549 aa		3.77	□□□□□ -1.81
RSA3	YLR221C	PRP18	P33411	251 aa	Predicted RBP	3.77	□□□□□ -1.81
RSA3	YLR221C	RCN1	P36054	211 aa		3.77	□□□□□ -1.81
RSA3	YLR221C	GON7	P46984	123 aa		3.77	□□□□□ -1.81
RSA3	YLR221C	RMR1	P53060	241 aa		3.77	□□□□□ -1.81
RSA3	YLR221C	FYV6	P53913	173 aa		3.77	□□□□□ -1.81
RSA3	YLR221C	DCN1	Q12395	269 aa		3.77	□□□□□ -1.81
RSA3	YLR221C	CDC33	P07260	213 aa	Known RBP	3.76	□□□□□ -1.81
RSA3	YLR221C	CBT1	P36038	271 aa	Predicted RBP	3.76	□□□□□ -1.81
RSA3	YLR221C	YKR032W	P36127	104 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	OST2	P46964	130 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	PIR5	P46999	287 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	RAD17	P48581	401 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	YML108W	Q03759	105 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	INM2	Q05533	292 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	TPO4	Q12256	659 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	BBP1	Q12365	385 aa		3.76	□□□□□ -1.81
RSA3	YLR221C	RPL28	P02406	149 aa	Known RBP	3.75	□□□□□ -1.81
RSA3	YLR221C	ERG24	P32462	438 aa	Known RBP	3.75	□□□□□ -1.81
RSA3	YLR221C	SDH4	P37298	181 aa		3.75	□□□□□ -1.81
RSA3	YLR221C	YGL159W	P53110	370 aa		3.75	□□□□□ -1.81
RSA3	YLR221C	YLR030W	Q07967	263 aa		3.75	□□□□□ -1.81
RSA3	YLR221C	YPL257W	Q08974	193 aa		3.75	□□□□□ -1.81
RSA3	YLR221C	HTL1	Q9URQ5	78 aa		3.75	□□□□□ -1.81
RSA3	YLR221C	SIR4	P11978	1358 aa		3.75	□□□□□ -1.81
RSA3	YLR221C	CDC36	P06100	191 aa	Predicted RBP	3.74	□□□□□ -1.81
RSA3	YLR221C	URA6	P15700	204 aa		3.74	□□□□□ -1.81
RSA3	YLR221C	SIP3	P38717	1229 aa		3.74	□□□□□ -1.81
RSA3	YLR221C	YNL194C	P40169	301 aa		3.74	□□□□□ -1.81
RSA3	YLR221C	TIF34	P40217	347 aa	Known RBP	3.74	□□□□□ -1.81
RSA3	YLR221C	CCH1	P50077	2039 aa		3.74	□□□□□ -1.81
RSA3	YLR221C	DPM1	P14020	267 aa	Known RBP	3.73	□□□□□ -1.81
RSA3	YLR221C	MSA2	P36157	363 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	COG3	P40094	801 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	CAT5	P41735	233 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	YJL016W	P47072	561 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	NUP57	P48837	541 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	BRR6	P53062	197 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	GTR2	P53290	341 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	RSM10	Q03201	203 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	PEX12	Q04370	399 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	MSA1	Q08471	629 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	JLP1	Q12358	412 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	SAS5	Q99314	248 aa		3.73	□□□□□ -1.81
RSA3	YLR221C	PEX17	P40155	199 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	ARC15	P40518	154 aa	RIP-Chip data	3.72	□□□□□ -1.81	not detected
RSA3	YLR221C	MGA1	P53050	456 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	TOS8	P53147	276 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	ALG13	P53178	202 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	SSU72	P53538	206 aa	Predicted RBP	3.72	□□□□□ -1.81
RSA3	YLR221C	APJ1	P53940	528 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	GRH1	Q04410	372 aa	Known RBP	3.72	□□□□□ -1.81
RSA3	YLR221C	YMR226C	Q05016	267 aa	Known RBP	3.72	□□□□□ -1.81
RSA3	YLR221C	CLP1	Q08685	445 aa	Predicted RBP	3.72	□□□□□ -1.81
RSA3	YLR221C	YOR020W-A	Q3E824	90 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	YPL229W	Q99395	206 aa		3.72	□□□□□ -1.81
RSA3	YLR221C	ADH3	P07246	375 aa	Known RBP	3.71	□□□□□ -1.82
RSA3	YLR221C	CWC23	P52868	283 aa	Predicted RBP	3.71	□□□□□ -1.82
RSA3	YLR221C	ABF2	Q02486	183 aa		3.71	□□□□□ -1.82
RSA3	YLR221C	DSF1	P0CX08	502 aa		3.7	□□□□□ -1.82
RSA3	YLR221C	YNR073C	P0CX09	502 aa		3.7	□□□□□ -1.82
RSA3	YLR221C	PRX1	P34227	261 aa	Known RBP	3.7	□□□□□ -1.82
RSA3	YLR221C	YPT52	P36018	234 aa	Known RBP	3.7	□□□□□ -1.82
RSA3	YLR221C	FIS1	P40515	155 aa		3.7	□□□□□ -1.82
RSA3	YLR221C	ADO1	P47143	340 aa	Known RBP	3.7	□□□□□ -1.82
RSA3	YLR221C	YMR279C	Q03263	540 aa		3.7	□□□□□ -1.82
RSA3	YLR221C	YML096W	Q04489	525 aa		3.7	□□□□□ -1.82
RSA3	YLR221C	SSQ1	Q05931	657 aa	Predicted RBP	3.7	□□□□□ -1.82
RSA3	YLR221C	LSO2	Q3E772	92 aa	Known RBP	3.7	□□□□□ -1.82
RSA3	YLR221C	DRS2	P39524	1355 aa		3.7	□□□□□ -1.82
RSA3	YLR221C	JIP3	O13555	125 aa		3.69	□□□□□ -1.82
RSA3	YLR221C	COX5A	P00424	153 aa		3.69	□□□□□ -1.82
RSA3	YLR221C	RPL26A	P05743	127 aa	Known RBP	3.69	□□□□□ -1.82
RSA3	YLR221C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.69	□□□□□ -1.82	not detected
RSA3	YLR221C	YER188W	P40103	239 aa		3.69	□□□□□ -1.82
RSA3	YLR221C	RFC4	P40339	323 aa	Known RBP	3.69	□□□□□ -1.82
RSA3	YLR221C	YJR056C	P47115	236 aa		3.69	□□□□□ -1.82
RSA3	YLR221C	RPL26B	P53221	127 aa	Known RBP	3.69	□□□□□ -1.82
RSA3	YLR221C	ERV29	P53337	310 aa		3.69	□□□□□ -1.82
RSA3	YLR221C	MRPS17	Q03246	237 aa	Predicted RBP	3.69	□□□□□ -1.82
RSA3	YLR221C	HRT1	Q08273	121 aa		3.69	□□□□□ -1.82
RSA3	YLR221C	CCA1	P21269	546 aa		3.68	□□□□□ -1.82
RSA3	YLR221C	RPF1	P38805	295 aa	Known RBP	3.68	□□□□□ -1.82
RSA3	YLR221C	YHR125W	P38831	101 aa		3.68	□□□□□ -1.82
RSA3	YLR221C	CUS2	P53830	285 aa	Predicted RBP	3.68	□□□□□ -1.82
RSA3	YLR221C	DID2	P69771	204 aa		3.68	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms