RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W RSM25P40496 264 aa1.01□□□□□ -2.25
SLX4YLR135W YJL144WP47009 104 aa1.01□□□□□ -2.25
SLX4YLR135W HAM1P47119 197 aaKnown RBP1.01□□□□□ -2.25
SLX4YLR135W ILM1P47155 203 aa1.01□□□□□ -2.25
SLX4YLR135W YJR141WP47172 347 aaPredicted RBP1.01□□□□□ -2.25
SLX4YLR135W RMR1P53060 241 aa1.01□□□□□ -2.25
SLX4YLR135W TOS8P53147 276 aa1.01□□□□□ -2.25
SLX4YLR135W YGL088WP53151 121 aa1.01□□□□□ -2.25
SLX4YLR135W RSM10Q03201 203 aa1.01□□□□□ -2.25
SLX4YLR135W BNA7Q04066 261 aa1.01□□□□□ -2.25
SLX4YLR135W CDC123Q05791 360 aa1.01□□□□□ -2.25
SLX4YLR135W TPO4Q12256 659 aa1.01□□□□□ -2.25
SLX4YLR135W GEP5Q12393 293 aa1.01□□□□□ -2.25
SLX4YLR135W YKL183C-AQ3E765 70 aa1.01□□□□□ -2.25
SLX4YLR135W RPL26AP05743 127 aaKnown RBP1□□□□□ -2.25
SLX4YLR135W CDC33P07260 213 aaKnown RBP1□□□□□ -2.25
SLX4YLR135W DPM1P14020 267 aaKnown RBP1□□□□□ -2.25
SLX4YLR135W STE18P18852 110 aa1□□□□□ -2.25
SLX4YLR135W CCA1P21269 546 aa1□□□□□ -2.25
SLX4YLR135W PRP18P33411 251 aaPredicted RBP1□□□□□ -2.25
SLX4YLR135W PRX1P34227 261 aaKnown RBP1□□□□□ -2.25
SLX4YLR135W COS8P38723 381 aa1□□□□□ -2.25
SLX4YLR135W PEX17P40155 199 aa1□□□□□ -2.25
SLX4YLR135W YJR056CP47115 236 aa1□□□□□ -2.25
SLX4YLR135W TRM9P49957 279 aa1□□□□□ -2.25
SLX4YLR135W BRR6P53062 197 aa1□□□□□ -2.25
SLX4YLR135W RPL26BP53221 127 aaKnown RBP1□□□□□ -2.25
SLX4YLR135W SYF2P53277 215 aaPredicted RBP1□□□□□ -2.25
SLX4YLR135W CAB4P53332 305 aa1□□□□□ -2.25
SLX4YLR135W MRPS17Q03246 237 aaPredicted RBP1□□□□□ -2.25
SLX4YLR135W YML108WQ03759 105 aa1□□□□□ -2.25
SLX4YLR135W PEX12Q04370 399 aa1□□□□□ -2.25
SLX4YLR135W SWI1P09547 1314 aa1□□□□□ -2.25
SLX4YLR135W COX5AP00424 153 aa1□□□□□ -2.25
SLX4YLR135W RAD10P06838 210 aa1□□□□□ -2.25
SLX4YLR135W KRE1P17260 313 aa1□□□□□ -2.25
SLX4YLR135W MIG1P27705 504 aa1□□□□□ -2.25
SLX4YLR135W SIP3P38717 1229 aa1□□□□□ -2.25
SLX4YLR135W RPA43P46669 326 aa1□□□□□ -2.25
SLX4YLR135W OST2P46964 130 aa1□□□□□ -2.25
SLX4YLR135W YJL016WP47072 561 aa1□□□□□ -2.25
SLX4YLR135W CWC23P52868 283 aaPredicted RBP1□□□□□ -2.25
SLX4YLR135W MGA1P53050 456 aa1□□□□□ -2.25
SLX4YLR135W YGL159WP53110 370 aa1□□□□□ -2.25
SLX4YLR135W CGR1P53188 120 aa1□□□□□ -2.25
SLX4YLR135W GTR2P53290 341 aa1□□□□□ -2.25
SLX4YLR135W ABF2Q02486 183 aa1□□□□□ -2.25
SLX4YLR135W INM2Q05533 292 aa1□□□□□ -2.25
SLX4YLR135W YLR030WQ07967 263 aa1□□□□□ -2.25
SLX4YLR135W FKS1P38631 1876 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W YPR096CO13587 100 aa0.99□□□□□ -2.25
SLX4YLR135W URA6P15700 204 aa0.99□□□□□ -2.25
SLX4YLR135W ERG24P32462 438 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W TAF14P35189 244 aa0.99□□□□□ -2.25
SLX4YLR135W SRY1P36007 326 aa0.99□□□□□ -2.25
SLX4YLR135W YPT52P36018 234 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W RCN1P36054 211 aa0.99□□□□□ -2.25
SLX4YLR135W RPF1P38805 295 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W ARC15P40518 154 aaRIP-Chip data0.99□□□□□ -2.25not detected
SLX4YLR135W IRC18P47056 224 aa0.99□□□□□ -2.25
SLX4YLR135W RAD17P48581 401 aa0.99□□□□□ -2.25
SLX4YLR135W CUS2P53830 285 aaPredicted RBP0.99□□□□□ -2.25
SLX4YLR135W YMR279CQ03263 540 aa0.99□□□□□ -2.25
SLX4YLR135W GRH1Q04410 372 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W MSA1Q08471 629 aa0.99□□□□□ -2.25
SLX4YLR135W JLP1Q12358 412 aa0.99□□□□□ -2.25
SLX4YLR135W GIS3Q12418 502 aa0.99□□□□□ -2.25
SLX4YLR135W LSO2Q3E772 92 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W SIR4P11978 1358 aa0.99□□□□□ -2.25
SLX4YLR135W Q0255P03881 472 aa0.99□□□□□ -2.25
SLX4YLR135W CBT1P36038 271 aaPredicted RBP0.99□□□□□ -2.25
SLX4YLR135W YGP1P38616 354 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W YNL194CP40169 301 aa0.99□□□□□ -2.25
SLX4YLR135W MRPL49P40858 161 aaPredicted RBP0.99□□□□□ -2.25
SLX4YLR135W CAT5P41735 233 aa0.99□□□□□ -2.25
SLX4YLR135W GON7P46984 123 aa0.99□□□□□ -2.25
SLX4YLR135W PIR5P46999 287 aa0.99□□□□□ -2.25
SLX4YLR135W NUP57P48837 541 aa0.99□□□□□ -2.25
SLX4YLR135W PRM8P53174 237 aa0.99□□□□□ -2.25
SLX4YLR135W ERV29P53337 310 aa0.99□□□□□ -2.25
SLX4YLR135W FYV6P53913 173 aa0.99□□□□□ -2.25
SLX4YLR135W YMR226CQ05016 267 aaKnown RBP0.99□□□□□ -2.25
SLX4YLR135W HEM25Q07534 307 aa0.99□□□□□ -2.25
SLX4YLR135W HRT1Q08273 121 aa0.99□□□□□ -2.25
SLX4YLR135W YOR020W-AQ3E824 90 aa0.99□□□□□ -2.25
SLX4YLR135W HTL1Q9URQ5 78 aa0.99□□□□□ -2.25
SLX4YLR135W IPP1P00817 287 aaKnown RBP0.98□□□□□ -2.25
SLX4YLR135W CDC36P06100 191 aaPredicted RBP0.98□□□□□ -2.25
SLX4YLR135W DSF1P0CX08 502 aa0.98□□□□□ -2.25
SLX4YLR135W YNR073CP0CX09 502 aa0.98□□□□□ -2.25
SLX4YLR135W SCO1P23833 295 aa0.98□□□□□ -2.25
SLX4YLR135W SCM4P32564 187 aa0.98□□□□□ -2.25
SLX4YLR135W MSA2P36157 363 aa0.98□□□□□ -2.25
SLX4YLR135W YHL026CP38740 315 aa0.98□□□□□ -2.25
SLX4YLR135W IKI1P38874 309 aa0.98□□□□□ -2.25
SLX4YLR135W YER188WP40103 239 aa0.98□□□□□ -2.25
SLX4YLR135W RFC4P40339 323 aaKnown RBP0.98□□□□□ -2.25
SLX4YLR135W SMD3P43321 101 aaKnown RBP0.98□□□□□ -2.25
SLX4YLR135W ADO1P47143 340 aaKnown RBP0.98□□□□□ -2.25
SLX4YLR135W SSU72P53538 206 aaPredicted RBP0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms