RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C RFA1P22336 621 aaKnown RBP8.91□□□□□ -0.98
SHM2YLR058C RNA14P25298 677 aaKnown RBP8.91□□□□□ -0.98
SHM2YLR058C ATG22P25568 528 aa8.91□□□□□ -0.98
SHM2YLR058C SKP1P52286 194 aa8.91□□□□□ -0.98
SHM2YLR058C YMR279CQ03263 540 aa8.91□□□□□ -0.98
SHM2YLR058C YDR248CQ03786 193 aa8.91□□□□□ -0.98
SHM2YLR058C PIN3Q06449 215 aa8.91□□□□□ -0.98
SHM2YLR058C YOR186WQ08560 144 aa8.91□□□□□ -0.98
SHM2YLR058C EAF3Q12432 401 aa8.91□□□□□ -0.98
SHM2YLR058C FSH3Q99369 266 aa8.91□□□□□ -0.98
SHM2YLR058C AAC1P04710 309 aa8.9□□□□□ -0.98
SHM2YLR058C RPS31P05759 152 aaKnown RBP8.9□□□□□ -0.98
SHM2YLR058C HNM1P19807 563 aa8.9□□□□□ -0.98
SHM2YLR058C BUD23P25627 275 aaPredicted RBP8.9□□□□□ -0.98
SHM2YLR058C PEX4P29340 183 aa8.9□□□□□ -0.98
SHM2YLR058C ACH1P32316 526 aa8.9□□□□□ -0.98
SHM2YLR058C MRPL3P36516 390 aa8.9□□□□□ -0.98
SHM2YLR058C MRPL27P36526 146 aaPredicted RBP8.9□□□□□ -0.98
SHM2YLR058C GWT1P47026 490 aa8.9□□□□□ -0.98
SHM2YLR058C RSM27P53305 110 aa8.9□□□□□ -0.98
SHM2YLR058C SED1Q01589 338 aa8.9□□□□□ -0.98
SHM2YLR058C MRPL13Q02204 264 aa8.9□□□□□ -0.98
SHM2YLR058C MRPS16Q02608 121 aa8.9□□□□□ -0.98
SHM2YLR058C YTH1Q06102 208 aaPredicted RBP8.9□□□□□ -0.98
SHM2YLR058C YOR385WQ08909 290 aa8.9□□□□□ -0.98
SHM2YLR058C RPL25P04456 142 aaKnown RBP8.89□□□□□ -0.99
SHM2YLR058C RAD52P06778 471 aaKnown RBP8.89□□□□□ -0.99
SHM2YLR058C SPS4P09937 338 aa8.89□□□□□ -0.99
SHM2YLR058C NHP6BP11633 99 aaKnown RBP8.89□□□□□ -0.99
SHM2YLR058C FIG1P38224 298 aa8.89□□□□□ -0.99
SHM2YLR058C GIM3P53900 129 aa8.89□□□□□ -0.99
SHM2YLR058C SCM3Q12334 223 aa8.89□□□□□ -0.99
SHM2YLR058C RDI1Q12434 202 aa8.89□□□□□ -0.99
SHM2YLR058C IFM1P25038 676 aa8.88□□□□□ -0.99
SHM2YLR058C DAL80P26343 269 aa8.88□□□□□ -0.99
SHM2YLR058C FMT1P32785 401 aa8.88□□□□□ -0.99
SHM2YLR058C NAT2P37293 288 aa8.88□□□□□ -0.99
SHM2YLR058C YCK3P39962 524 aa8.88□□□□□ -0.99
SHM2YLR058C DIE2P50076 525 aa8.88□□□□□ -0.99
SHM2YLR058C ARG5,6Q01217 863 aa8.88□□□□□ -0.99
SHM2YLR058C MPD1Q12404 318 aaKnown RBP8.88□□□□□ -0.99
SHM2YLR058C YLL053CP0CD98 152 aa8.88□□□□□ -0.99
SHM2YLR058C YOX1P34161 385 aa8.88□□□□□ -0.99
SHM2YLR058C YKL107WP34251 309 aa8.88□□□□□ -0.99
SHM2YLR058C TAF4P50105 388 aa8.88□□□□□ -0.99
SHM2YLR058C GPG1P53130 126 aa8.88□□□□□ -0.99
SHM2YLR058C PET122P10355 254 aa8.87□□□□□ -0.99
SHM2YLR058C IMP1P28627 190 aa8.87□□□□□ -0.99
SHM2YLR058C PPQ1P32945 549 aa8.87□□□□□ -0.99
SHM2YLR058C YKL187CP34231 750 aa8.87□□□□□ -0.99
SHM2YLR058C FLO10P36170 1169 aa8.87□□□□□ -0.99
SHM2YLR058C SHM2P37291 469 aaKnown RBP8.87□□□□□ -0.99
SHM2YLR058C YML018CQ03730 393 aa8.87□□□□□ -0.99
SHM2YLR058C YMR254CQ04838 102 aa8.87□□□□□ -0.99
SHM2YLR058C GRC3Q07845 632 aa8.87□□□□□ -0.99
SHM2YLR058C YLR108CQ12259 485 aa8.87□□□□□ -0.99
SHM2YLR058C PET20Q99373 253 aa8.87□□□□□ -0.99
SHM2YLR058C GCN3P14741 305 aa8.86□□□□□ -0.99
SHM2YLR058C YCR101CP25607 182 aa8.86□□□□□ -0.99
SHM2YLR058C ERG3P32353 365 aa8.86□□□□□ -0.99
SHM2YLR058C SPC29P33419 253 aa8.86□□□□□ -0.99
SHM2YLR058C ECM14P38836 430 aa8.86□□□□□ -0.99
SHM2YLR058C LNP1P38878 278 aa8.86□□□□□ -0.99
SHM2YLR058C BOL3P39724 118 aa8.86□□□□□ -0.99
SHM2YLR058C GAT2P40209 560 aa8.86□□□□□ -0.99
SHM2YLR058C QRI1P43123 477 aaKnown RBP8.86□□□□□ -0.99
SHM2YLR058C MRX5P47007 382 aa8.86□□□□□ -0.99
SHM2YLR058C LSM1P47017 172 aaKnown RBP8.86□□□□□ -0.99
SHM2YLR058C GTF1P53260 183 aaPredicted RBP8.86□□□□□ -0.99
SHM2YLR058C VBA1Q04301 562 aa8.86□□□□□ -0.99
SHM2YLR058C SYM1Q06563 197 aa8.86□□□□□ -0.99
SHM2YLR058C FCY22Q12119 530 aa8.86□□□□□ -0.99
SHM2YLR058C URA3P03962 267 aa8.85□□□□□ -0.99
SHM2YLR058C YML003WP0CF16 290 aa8.85□□□□□ -0.99
SHM2YLR058C CPR4P25334 318 aa8.85□□□□□ -0.99
SHM2YLR058C PRS2P38620 318 aaKnown RBP8.85□□□□□ -0.99
SHM2YLR058C RMD6P39975 231 aa8.85□□□□□ -0.99
SHM2YLR058C CCS1P40202 249 aaKnown RBP8.85□□□□□ -0.99
SHM2YLR058C RPS0BP46654 252 aaKnown RBP8.85□□□□□ -0.99
SHM2YLR058C YJR011CP47086 261 aaPredicted RBP8.85□□□□□ -0.99
SHM2YLR058C ALG9P53868 555 aaKnown RBP8.85□□□□□ -0.99
SHM2YLR058C RPL39P04650 51 aa8.84□□□□□ -0.99
SHM2YLR058C OCH1P31755 480 aa8.84□□□□□ -0.99
SHM2YLR058C PAN3P36102 679 aaPredicted RBP8.84□□□□□ -0.99
SHM2YLR058C EDS1P38073 919 aa8.84□□□□□ -0.99
SHM2YLR058C YBR197CP38306 217 aa8.84□□□□□ -0.99
SHM2YLR058C GON7P46984 123 aa8.84□□□□□ -0.99
SHM2YLR058C OKP1P53298 406 aa8.84□□□□□ -0.99
SHM2YLR058C PRM15Q03262 622 aa8.84□□□□□ -0.99
SHM2YLR058C YDR114CQ04597 100 aa8.84□□□□□ -0.99
SHM2YLR058C GRX2P17695 143 aaKnown RBP8.83□□□□□ -1
SHM2YLR058C DIT1P21623 536 aa8.83□□□□□ -1
SHM2YLR058C MNS1P32906 549 aa8.83□□□□□ -1
SHM2YLR058C HNT2P49775 206 aa8.83□□□□□ -1
SHM2YLR058C YPL067CQ02754 198 aa8.83□□□□□ -1
SHM2YLR058C NRG1Q03125 231 aa8.83□□□□□ -1
SHM2YLR058C NGL2Q03264 515 aaKnown RBP8.83□□□□□ -1
SHM2YLR058C PML1Q07930 204 aaPredicted RBP8.83□□□□□ -1
SHM2YLR058C TRM13Q12383 476 aa8.83□□□□□ -1
SHM2YLR058C SAR1P20606 190 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms