RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C RAD10P06838 210 aa1.89□□□□□ -2.11
YPT52YKR014C YMR31P19955 123 aa1.89□□□□□ -2.11
YPT52YKR014C RIB1P38066 345 aa1.89□□□□□ -2.11
YPT52YKR014C RTC3P38804 111 aaPredicted RBP1.89□□□□□ -2.11
YPT52YKR014C PRE6P40303 254 aaKnown RBP1.89□□□□□ -2.11
YPT52YKR014C YRB1P41920 201 aaKnown RBP1.89□□□□□ -2.11
YPT52YKR014C TRM9P49957 279 aa1.89□□□□□ -2.11
YPT52YKR014C NSA1P53136 463 aaPredicted RBP1.89□□□□□ -2.11
YPT52YKR014C YNL046WP53956 172 aa1.89□□□□□ -2.11
YPT52YKR014C BNA7Q04066 261 aa1.89□□□□□ -2.11
YPT52YKR014C AGC1Q12482 902 aa1.89□□□□□ -2.11
YPT52YKR014C NOT5Q12514 560 aaPredicted RBP1.89□□□□□ -2.11
YPT52YKR014C BCY1P07278 416 aaKnown RBP1.88□□□□□ -2.11
YPT52YKR014C DPM1P14020 267 aaKnown RBP1.88□□□□□ -2.11
YPT52YKR014C STE18P18852 110 aa1.88□□□□□ -2.11
YPT52YKR014C SSO1P32867 290 aa1.88□□□□□ -2.11
YPT52YKR014C NTF2P33331 125 aaKnown RBP1.88□□□□□ -2.11
YPT52YKR014C PRP18P33411 251 aaPredicted RBP1.88□□□□□ -2.11
YPT52YKR014C YER189WP40104 122 aa1.88□□□□□ -2.11
YPT52YKR014C MIC26P50087 233 aa1.88□□□□□ -2.11
YPT52YKR014C CGI121Q03705 181 aaKnown RBP1.88□□□□□ -2.11
YPT52YKR014C GRX3Q03835 250 aa1.88□□□□□ -2.11
YPT52YKR014C YMR114CQ04471 368 aaKnown RBP1.88□□□□□ -2.11
YPT52YKR014C CDC123Q05791 360 aa1.88□□□□□ -2.11
YPT52YKR014C BBP1Q12365 385 aa1.88□□□□□ -2.11
YPT52YKR014C EMP46Q12396 444 aa1.88□□□□□ -2.11
YPT52YKR014C YKL183C-AQ3E765 70 aa1.88□□□□□ -2.11
YPT52YKR014C MON2P48563 1636 aaPredicted RBP1.88□□□□□ -2.11
YPT52YKR014C IPP1P00817 287 aaKnown RBP1.87□□□□□ -2.11
YPT52YKR014C CDC33P07260 213 aaKnown RBP1.87□□□□□ -2.11
YPT52YKR014C YBR121C-AP0C5L4 52 aa1.87□□□□□ -2.11
YPT52YKR014C SNA3P14359 133 aa1.87□□□□□ -2.11
YPT52YKR014C ERD2P18414 219 aa1.87□□□□□ -2.11
YPT52YKR014C CBT1P36038 271 aaPredicted RBP1.87□□□□□ -2.11
YPT52YKR014C URA8P38627 578 aaPredicted RBP1.87□□□□□ -2.11
YPT52YKR014C ERG28P40030 148 aa1.87□□□□□ -2.11
YPT52YKR014C GON7P46984 123 aa1.87□□□□□ -2.11
YPT52YKR014C MCM22P47167 239 aa1.87□□□□□ -2.11
YPT52YKR014C CGR1P53188 120 aa1.87□□□□□ -2.11
YPT52YKR014C HEM25Q07534 307 aa1.87□□□□□ -2.11
YPT52YKR014C ADF1Q2V2Q1 113 aa1.87□□□□□ -2.11
YPT52YKR014C NCB2Q92317 146 aa1.87□□□□□ -2.11
YPT52YKR014C FKS1P38631 1876 aaKnown RBP1.86□□□□□ -2.11
YPT52YKR014C YLR462WO13556 202 aa1.86□□□□□ -2.11
YPT52YKR014C RPL28P02406 149 aaKnown RBP1.86□□□□□ -2.11
YPT52YKR014C CDC36P06100 191 aaPredicted RBP1.86□□□□□ -2.11
YPT52YKR014C SPT3P06844 337 aa1.86□□□□□ -2.11
YPT52YKR014C SGA1P08019 549 aa1.86□□□□□ -2.11
YPT52YKR014C SCO1P23833 295 aa1.86□□□□□ -2.11
YPT52YKR014C ERG24P32462 438 aaKnown RBP1.86□□□□□ -2.11
YPT52YKR014C RCN1P36054 211 aa1.86□□□□□ -2.11
YPT52YKR014C YEL075CP39972 122 aa1.86□□□□□ -2.11
YPT52YKR014C YNL194CP40169 301 aa1.86□□□□□ -2.11
YPT52YKR014C ILM1P47155 203 aa1.86□□□□□ -2.11
YPT52YKR014C YJR149WP47177 404 aa1.86□□□□□ -2.11
YPT52YKR014C RAD17P48581 401 aa1.86□□□□□ -2.11
YPT52YKR014C YGL159WP53110 370 aa1.86□□□□□ -2.11
YPT52YKR014C FAR8Q05040 523 aa1.86□□□□□ -2.11
YPT52YKR014C YPR172WQ06608 200 aa1.86□□□□□ -2.11
YPT52YKR014C YLR030WQ07967 263 aa1.86□□□□□ -2.11
YPT52YKR014C YOR268CQ08734 132 aa1.86□□□□□ -2.11
YPT52YKR014C DCN1Q12395 269 aa1.86□□□□□ -2.11
YPT52YKR014C DRS2P39524 1355 aa1.85□□□□□ -2.11
YPT52YKR014C MSA2P36157 363 aa1.85□□□□□ -2.11
YPT52YKR014C SIP3P38717 1229 aa1.85□□□□□ -2.11
YPT52YKR014C COS8P38723 381 aa1.85□□□□□ -2.11
YPT52YKR014C COG3P40094 801 aa1.85□□□□□ -2.11
YPT52YKR014C CAT5P41735 233 aa1.85□□□□□ -2.11
YPT52YKR014C OST2P46964 130 aa1.85□□□□□ -2.11
YPT52YKR014C HAM1P47119 197 aaKnown RBP1.85□□□□□ -2.11
YPT52YKR014C CWC23P52868 283 aaPredicted RBP1.85□□□□□ -2.11
YPT52YKR014C RMR1P53060 241 aa1.85□□□□□ -2.11
YPT52YKR014C ALG13P53178 202 aa1.85□□□□□ -2.11
YPT52YKR014C FYV6P53913 173 aa1.85□□□□□ -2.11
YPT52YKR014C SLM2P53955 656 aa1.85□□□□□ -2.11
YPT52YKR014C RSM10Q03201 203 aa1.85□□□□□ -2.11
YPT52YKR014C INM2Q05533 292 aa1.85□□□□□ -2.11
YPT52YKR014C MSA1Q08471 629 aa1.85□□□□□ -2.11
YPT52YKR014C TPO4Q12256 659 aa1.85□□□□□ -2.11
YPT52YKR014C JLP1Q12358 412 aa1.85□□□□□ -2.11
YPT52YKR014C YPL229WQ99395 206 aa1.85□□□□□ -2.11
YPT52YKR014C HTL1Q9URQ5 78 aa1.85□□□□□ -2.11
YPT52YKR014C DSF1P0CX08 502 aa1.84□□□□□ -2.11
YPT52YKR014C YNR073CP0CX09 502 aa1.84□□□□□ -2.11
YPT52YKR014C URA6P15700 204 aa1.84□□□□□ -2.11
YPT52YKR014C NRG2P38082 220 aa1.84□□□□□ -2.11
YPT52YKR014C PEX17P40155 199 aa1.84□□□□□ -2.11
YPT52YKR014C ADO1P47143 340 aaKnown RBP1.84□□□□□ -2.11
YPT52YKR014C YJR146WP47174 117 aa1.84□□□□□ -2.11
YPT52YKR014C BAT2P47176 376 aaKnown RBP1.84□□□□□ -2.11
YPT52YKR014C NUP57P48837 541 aa1.84□□□□□ -2.11
YPT52YKR014C BRR6P53062 197 aa1.84□□□□□ -2.11
YPT52YKR014C TOS8P53147 276 aa1.84□□□□□ -2.11
YPT52YKR014C GTR2P53290 341 aa1.84□□□□□ -2.11
YPT52YKR014C PEX12Q04370 399 aa1.84□□□□□ -2.11
YPT52YKR014C YPL257WQ08974 193 aa1.84□□□□□ -2.11
YPT52YKR014C SAS5Q99314 248 aa1.84□□□□□ -2.11
YPT52YKR014C COX5AP00424 153 aa1.83□□□□□ -2.12
YPT52YKR014C IDH1P28834 360 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
YPT52YKR014C PRX1P34227 261 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms