RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	YOR376W	Q08900	122 aa		4.39	□□□□□ -1.71
DOA1	YKL213C	RRI1	Q12468	440 aa		4.39	□□□□□ -1.71
DOA1	YKL213C	DAT1	P13483	248 aa	Known RBP	4.38	□□□□□ -1.71
DOA1	YKL213C	NUP1	P20676	1076 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	PHD1	P36093	366 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	AHP1	P38013	176 aa	Known RBP	4.38	□□□□□ -1.71
DOA1	YKL213C	MRPL16	P38064	232 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	PAC2	P39937	518 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	YNL195C	P40168	261 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	SDP1	P40479	209 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	BNA2	P47125	453 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	DIE2	P50076	525 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	RIB4	P50861	169 aa	Predicted RBP	4.38	□□□□□ -1.71
DOA1	YKL213C	VPS73	P53142	486 aa	Known RBP	4.38	□□□□□ -1.71
DOA1	YKL213C	HXT11	P54862	567 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	YMR099C	Q03161	297 aa	Known RBP	4.38	□□□□□ -1.71
DOA1	YKL213C	SEI1	Q06058	285 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	TAD3	Q9URQ3	322 aa		4.38	□□□□□ -1.71
DOA1	YKL213C	TPI1	P00942	248 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	POF1	P25576	258 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	MRPL24	P36525	258 aa	Predicted RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	MRPL36	P36531	177 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	ERV15	P38312	142 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	YBR285W	P38354	144 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	YJL118W	P47022	219 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	YJR011C	P47086	261 aa	Predicted RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	YNL184C	P53876	108 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	APS2	Q00381	147 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	YKR011C	Q02209	353 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	NUP53	Q03790	475 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	DAL4	Q04895	635 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	NPC2	Q12408	173 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	SFG1	Q12507	346 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	HBN1	Q96VH4	193 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	FLP1	P03870	423 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	PHO2	P07269	559 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	RPL31A	P0C2H8	113 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	RPL31B	P0C2H9	113 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	RPS18A	P0CX55	146 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	RPS18B	P0CX56	146 aa	Predicted RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	ARF1	P11076	181 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	PDA1	P16387	420 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	SPO7	P18410	259 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	ATP10	P18496	279 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	YCR023C	P25351	611 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	OCH1	P31755	480 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	ECT1	P33412	323 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	NSG1	P38837	291 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	CTF8	P38877	133 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	ALP1	P38971	573 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	RRG9	P40156	214 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	HXT9	P40885	567 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	NSE4	P43124	402 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	BAT2	P47176	376 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	UBC7	Q02159	165 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	ATG21	Q02887	496 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	SMP3	Q04174	516 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	FSF1	Q12029	327 aa	Known RBP	4.37	□□□□□ -1.71
DOA1	YKL213C	TY1A-BR	Q12217	440 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	MHF1	Q3E835	90 aa		4.37	□□□□□ -1.71
DOA1	YKL213C	ECM15	P35195	104 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	COS9	P36034	407 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	MIC12	P38341	106 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	SOL3	P38858	249 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	MLH1	P38920	769 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	SHO1	P40073	367 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YNL194C	P40169	301 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YFL054C	P43549	646 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	CUZ1	P53899	274 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	CAB5	Q03941	241 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	CAC2	Q04199	468 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YLR446W	Q06204	433 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YPR015C	Q12531	247 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YPL119C-A	Q3E751	87 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YKL183C-A	Q3E765	70 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YPR014C	Q6B0W2	109 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	DET1	Q99288	334 aa	Known RBP	4.36	□□□□□ -1.71
DOA1	YKL213C	GLT1	Q12680	2145 aa	Known RBP	4.36	□□□□□ -1.71
DOA1	YKL213C	TPK3	P05986	398 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YFR010W-A	P0C5N0	62 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	RPL43A	P0CX25	92 aa	Known RBP	4.36	□□□□□ -1.71
DOA1	YKL213C	RPL43B	P0CX26	92 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	TFS1	P14306	219 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	CUP2	P15315	225 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	RPB10	P22139	70 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YCR100C	P25606	316 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	YCR102C	P25608	368 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	EHD3	P28817	500 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	ERG9	P29704	444 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	LDS1	P31379	325 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	HSP150	P32478	413 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	OM14	P38325	134 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	PHM8	P40025	321 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	SEC24	P40482	926 aa	Known RBP	4.36	□□□□□ -1.71
DOA1	YKL213C	CHA4	P43634	648 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	HMS2	P47175	358 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	COS10	P52924	374 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	ABF2	Q02486	183 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	AIM34	Q03673	198 aa		4.36	□□□□□ -1.71
DOA1	YKL213C	SEC13	Q04491	297 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms