RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C PRM15Q03262 622 aa2.13□□□□□ -2.07
VPS25YJR102C INM2Q05533 292 aa2.13□□□□□ -2.07
VPS25YJR102C YPL257WQ08974 193 aa2.13□□□□□ -2.07
VPS25YJR102C ADH3P07246 375 aaKnown RBP2.12□□□□□ -2.07
VPS25YJR102C DSF1P0CX08 502 aa2.12□□□□□ -2.07
VPS25YJR102C YNR073CP0CX09 502 aa2.12□□□□□ -2.07
VPS25YJR102C FIS1P40515 155 aa2.12□□□□□ -2.07
VPS25YJR102C YGR026WP53217 278 aa2.12□□□□□ -2.07
VPS25YJR102C YNL046WP53956 172 aa2.12□□□□□ -2.07
VPS25YJR102C PET117Q02771 107 aa2.12□□□□□ -2.07
VPS25YJR102C YMR279CQ03263 540 aa2.12□□□□□ -2.07
VPS25YJR102C SEI1Q06058 285 aa2.12□□□□□ -2.07
VPS25YJR102C YCR016WP25617 290 aaKnown RBP2.11□□□□□ -2.07
VPS25YJR102C SRB4P32569 687 aa2.11□□□□□ -2.07
VPS25YJR102C MSN4P33749 630 aa2.11□□□□□ -2.07
VPS25YJR102C LDB7P38210 180 aa2.11□□□□□ -2.07
VPS25YJR102C FMC1P40491 155 aa2.11□□□□□ -2.07
VPS25YJR102C RMR1P53060 241 aa2.11□□□□□ -2.07
VPS25YJR102C GTR2P53290 341 aa2.11□□□□□ -2.07
VPS25YJR102C SRL4Q03085 281 aa2.11□□□□□ -2.07
VPS25YJR102C KRE28Q04431 385 aa2.11□□□□□ -2.07
VPS25YJR102C YPR172WQ06608 200 aa2.11□□□□□ -2.07
VPS25YJR102C AKR2Q12013 749 aa2.11□□□□□ -2.07
VPS25YJR102C SMD3P43321 101 aaKnown RBP2.1□□□□□ -2.07
VPS25YJR102C DCR2Q05924 578 aa2.1□□□□□ -2.07
VPS25YJR102C ATO3Q12359 275 aa2.1□□□□□ -2.07
VPS25YJR102C HTL1Q9URQ5 78 aa2.1□□□□□ -2.07
VPS25YJR102C COX5AP00424 153 aa2.09□□□□□ -2.07
VPS25YJR102C MRPL25P23369 157 aa2.09□□□□□ -2.07
VPS25YJR102C CUE1P38428 203 aa2.09□□□□□ -2.07
VPS25YJR102C YAR068WP39564 161 aa2.09□□□□□ -2.07
VPS25YJR102C ILM1P47155 203 aa2.09□□□□□ -2.07
VPS25YJR102C ATG39Q06159 398 aa2.09□□□□□ -2.07
VPS25YJR102C MSA1Q08471 629 aa2.09□□□□□ -2.07
VPS25YJR102C YPT52P36018 234 aaKnown RBP2.08□□□□□ -2.08
VPS25YJR102C FCY21P40039 528 aa2.08□□□□□ -2.08
VPS25YJR102C LIA1P47120 325 aaKnown RBP2.08□□□□□ -2.08
VPS25YJR102C RPL9AP05738 191 aaKnown RBP2.07□□□□□ -2.08
VPS25YJR102C MATALPHA1P0CY06 175 aa2.07□□□□□ -2.08
VPS25YJR102C HMLALPHA1P0CY07 175 aa2.07□□□□□ -2.08
VPS25YJR102C ERD2P18414 219 aa2.07□□□□□ -2.08
VPS25YJR102C YKL075CP36083 450 aa2.07□□□□□ -2.08
VPS25YJR102C CAT5P41735 233 aa2.07□□□□□ -2.08
VPS25YJR102C CIS3P47001 227 aa2.07□□□□□ -2.08
VPS25YJR102C HAM1P47119 197 aaKnown RBP2.07□□□□□ -2.08
VPS25YJR102C RPL9BP51401 191 aaKnown RBP2.07□□□□□ -2.08
VPS25YJR102C RPS5P26783 225 aaKnown RBP2.06□□□□□ -2.08
VPS25YJR102C CTR2P38865 189 aa2.06□□□□□ -2.08
VPS25YJR102C BAT2P47176 376 aaKnown RBP2.06□□□□□ -2.08
VPS25YJR102C SSQ1Q05931 657 aaPredicted RBP2.06□□□□□ -2.08
VPS25YJR102C NIP7Q08962 181 aaKnown RBP2.06□□□□□ -2.08
VPS25YJR102C YOR020W-AQ3E824 90 aa2.06□□□□□ -2.08
VPS25YJR102C SNA3P14359 133 aa2.05□□□□□ -2.08
VPS25YJR102C FCY2P17064 533 aa2.05□□□□□ -2.08
VPS25YJR102C PEX4P29340 183 aa2.05□□□□□ -2.08
VPS25YJR102C RIB1P38066 345 aa2.05□□□□□ -2.08
VPS25YJR102C YIL001WP40560 513 aa2.05□□□□□ -2.08
VPS25YJR102C TRM9P49957 279 aa2.05□□□□□ -2.08
VPS25YJR102C NSA1P53136 463 aaPredicted RBP2.05□□□□□ -2.08
VPS25YJR102C YML096WQ04489 525 aa2.05□□□□□ -2.08
VPS25YJR102C SIR4P11978 1358 aa2.05□□□□□ -2.08
VPS25YJR102C MSW1P04803 379 aa2.04□□□□□ -2.08
VPS25YJR102C FBA1P14540 359 aaKnown RBP2.04□□□□□ -2.08
VPS25YJR102C CDC10P25342 322 aaKnown RBP2.04□□□□□ -2.08
VPS25YJR102C NUP84P52891 726 aa2.04□□□□□ -2.08
VPS25YJR102C YGR219WP53307 113 aa2.04□□□□□ -2.08
VPS25YJR102C MRPS8Q03799 155 aa2.04□□□□□ -2.08
VPS25YJR102C RPF1P38805 295 aaKnown RBP2.03□□□□□ -2.08
VPS25YJR102C LSM4P40070 187 aaKnown RBP2.03□□□□□ -2.08
VPS25YJR102C YFR054CP43622 192 aa2.03□□□□□ -2.08
VPS25YJR102C YJR056CP47115 236 aa2.03□□□□□ -2.08
VPS25YJR102C DAD3P69850 94 aa2.03□□□□□ -2.08
VPS25YJR102C YLR283WQ05867 314 aa2.03□□□□□ -2.08
VPS25YJR102C YPL229WQ99395 206 aa2.03□□□□□ -2.08
VPS25YJR102C DRS2P39524 1355 aa2.02□□□□□ -2.09
VPS25YJR102C MDH3P32419 343 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
VPS25YJR102C VPS21P36017 210 aaKnown RBP2.02□□□□□ -2.09
VPS25YJR102C RPA43P46669 326 aa2.02□□□□□ -2.09
VPS25YJR102C ERV29P53337 310 aa2.02□□□□□ -2.09
VPS25YJR102C NOP13P53883 403 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
VPS25YJR102C BOL1Q3E793 110 aa2.02□□□□□ -2.09
VPS25YJR102C RAS2P01120 322 aaKnown RBP2.01□□□□□ -2.09
VPS25YJR102C RPO26P20435 155 aa2.01□□□□□ -2.09
VPS25YJR102C SCL1P21243 252 aaKnown RBP2.01□□□□□ -2.09
VPS25YJR102C YBR063CP38083 404 aa2.01□□□□□ -2.09
VPS25YJR102C PHO88P38264 188 aaPredicted RBP2.01□□□□□ -2.09
VPS25YJR102C DOG1P38774 246 aa2.01□□□□□ -2.09
VPS25YJR102C COX15P40086 486 aa2.01□□□□□ -2.09
VPS25YJR102C MCM22P47167 239 aa2.01□□□□□ -2.09
VPS25YJR102C YMD8Q03697 442 aa2.01□□□□□ -2.09
VPS25YJR102C NEJ1Q06148 342 aa2.01□□□□□ -2.09
VPS25YJR102C RHO1P06780 209 aaKnown RBP2□□□□□ -2.09
VPS25YJR102C BCY1P07278 416 aaKnown RBP2□□□□□ -2.09
VPS25YJR102C YPR170W-BP0C5R9 85 aa2□□□□□ -2.09
VPS25YJR102C GRX2P17695 143 aaKnown RBP2□□□□□ -2.09
VPS25YJR102C OAC1P32332 324 aa2□□□□□ -2.09
VPS25YJR102C ECM33P38248 429 aaKnown RBP2□□□□□ -2.09
VPS25YJR102C YER085CP40058 173 aa2□□□□□ -2.09
VPS25YJR102C PEX17P40155 199 aa2□□□□□ -2.09
VPS25YJR102C YJR149WP47177 404 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms