RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C ARG80P07249 177 aa2.86□□□□□ -1.95
PCI8YIL071C RPL3P14126 387 aaKnown RBP2.86□□□□□ -1.95
PCI8YIL071C UTR1P21373 530 aa2.86□□□□□ -1.95
PCI8YIL071C GPI12P23797 304 aa2.86□□□□□ -1.95
PCI8YIL071C MDH3P32419 343 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
PCI8YIL071C PAD1P33751 242 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
PCI8YIL071C VPS51P36116 164 aa2.86□□□□□ -1.95
PCI8YIL071C CHK1P38147 527 aa2.86□□□□□ -1.95
PCI8YIL071C RRF1P38771 230 aa2.86□□□□□ -1.95
PCI8YIL071C RTT105P40063 208 aa2.86□□□□□ -1.95
PCI8YIL071C NAS2P40555 220 aa2.86□□□□□ -1.95
PCI8YIL071C HXT9P40885 567 aa2.86□□□□□ -1.95
PCI8YIL071C SFH5P47008 294 aa2.86□□□□□ -1.95
PCI8YIL071C YGL204CP53089 101 aa2.86□□□□□ -1.95
PCI8YIL071C HXT11P54862 567 aa2.86□□□□□ -1.95
PCI8YIL071C RPL6AQ02326 176 aaKnown RBP2.86□□□□□ -1.95
PCI8YIL071C VBA1Q04301 562 aa2.86□□□□□ -1.95
PCI8YIL071C RBS1Q05672 457 aaKnown RBP2.86□□□□□ -1.95
PCI8YIL071C PEX30Q06169 523 aa2.86□□□□□ -1.95
PCI8YIL071C HRT1Q08273 121 aa2.86□□□□□ -1.95
PCI8YIL071C RDR1Q08904 546 aa2.86□□□□□ -1.95
PCI8YIL071C YDL109CQ12103 647 aa2.86□□□□□ -1.95
PCI8YIL071C RTC5Q12108 567 aaKnown RBP2.86□□□□□ -1.95
PCI8YIL071C TMS1Q12116 473 aa2.86□□□□□ -1.95
PCI8YIL071C ISA2Q12425 185 aa2.86□□□□□ -1.95
PCI8YIL071C YGL194C-AQ2V2P6 80 aa2.86□□□□□ -1.95
PCI8YIL071C CDC39P25655 2108 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C SEC16P48415 2195 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C PRB1P09232 635 aa2.85□□□□□ -1.95
PCI8YIL071C PUT1P09368 476 aa2.85□□□□□ -1.95
PCI8YIL071C RNA14P25298 677 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C YCR016WP25617 290 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C YEL045CP32616 141 aa2.85□□□□□ -1.95
PCI8YIL071C MSN4P33749 630 aa2.85□□□□□ -1.95
PCI8YIL071C WBP1P33767 430 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C YBR144CP34215 104 aa2.85□□□□□ -1.95
PCI8YIL071C TAF14P35189 244 aa2.85□□□□□ -1.95
PCI8YIL071C NSG1P38837 291 aa2.85□□□□□ -1.95
PCI8YIL071C SER3P40054 469 aa2.85□□□□□ -1.95
PCI8YIL071C YIL086CP40503 102 aa2.85□□□□□ -1.95
PCI8YIL071C YIL060WP40519 144 aa2.85□□□□□ -1.95
PCI8YIL071C YFR054CP43622 192 aa2.85□□□□□ -1.95
PCI8YIL071C AIM25P47140 327 aa2.85□□□□□ -1.95
PCI8YIL071C ECM27P47144 725 aa2.85□□□□□ -1.95
PCI8YIL071C POP6P53218 158 aa2.85□□□□□ -1.95
PCI8YIL071C VHT1P53241 593 aa2.85□□□□□ -1.95
PCI8YIL071C OGG1P53397 376 aaPredicted RBP2.85□□□□□ -1.95
PCI8YIL071C DID2P69771 204 aa2.85□□□□□ -1.95
PCI8YIL071C PRM15Q03262 622 aa2.85□□□□□ -1.95
PCI8YIL071C YML108WQ03759 105 aa2.85□□□□□ -1.95
PCI8YIL071C UTP15Q04305 513 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C PAL1Q05518 499 aaKnown RBP2.85□□□□□ -1.95
PCI8YIL071C MRPL51Q06090 140 aaPredicted RBP2.85□□□□□ -1.95
PCI8YIL071C HEM25Q07534 307 aa2.85□□□□□ -1.95
PCI8YIL071C YLR030WQ07967 263 aa2.85□□□□□ -1.95
PCI8YIL071C COQ10Q08058 207 aa2.85□□□□□ -1.95
PCI8YIL071C YOR385WQ08909 290 aa2.85□□□□□ -1.95
PCI8YIL071C MCP1Q12106 302 aa2.85□□□□□ -1.95
PCI8YIL071C RLM1Q12224 676 aa2.85□□□□□ -1.95
PCI8YIL071C OPI3P05375 206 aa2.84□□□□□ -1.96
PCI8YIL071C IMG1P25626 169 aa2.84□□□□□ -1.96
PCI8YIL071C PPA2P28239 310 aa2.84□□□□□ -1.96
PCI8YIL071C ITR1P30605 584 aa2.84□□□□□ -1.96
PCI8YIL071C FAA1P30624 700 aaKnown RBP2.84□□□□□ -1.96
PCI8YIL071C ACB1P31787 87 aa2.84□□□□□ -1.96
PCI8YIL071C GPX1P36014 167 aa2.84□□□□□ -1.96
PCI8YIL071C NAT2P37293 288 aa2.84□□□□□ -1.96
PCI8YIL071C MTC4P38335 694 aaKnown RBP2.84□□□□□ -1.96
PCI8YIL071C PHO90P39535 881 aa2.84□□□□□ -1.96
PCI8YIL071C PTI1P39927 425 aaPredicted RBP2.84□□□□□ -1.96
PCI8YIL071C SMB1P40018 196 aaKnown RBP2.84□□□□□ -1.96
PCI8YIL071C RFC4P40339 323 aaKnown RBP2.84□□□□□ -1.96
PCI8YIL071C TIR3P40552 269 aa2.84□□□□□ -1.96
PCI8YIL071C HXT14P42833 540 aa2.84□□□□□ -1.96
PCI8YIL071C OTU1P43558 301 aa2.84□□□□□ -1.96
PCI8YIL071C CCC1P47818 322 aa2.84□□□□□ -1.96
PCI8YIL071C UBC12P52491 188 aa2.84□□□□□ -1.96
PCI8YIL071C YGR042WP53227 271 aa2.84□□□□□ -1.96
PCI8YIL071C BUD25P85052 153 aa2.84□□□□□ -1.96
PCI8YIL071C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.84□□□□□ -1.96not detected
PCI8YIL071C DCR2Q05924 578 aa2.84□□□□□ -1.96
PCI8YIL071C SEI1Q06058 285 aa2.84□□□□□ -1.96
PCI8YIL071C BTS1Q12051 335 aa2.84□□□□□ -1.96
PCI8YIL071C AEP3Q12089 606 aa2.84□□□□□ -1.96
PCI8YIL071C ORT1Q12375 292 aa2.84□□□□□ -1.96
PCI8YIL071C YOR343CQ12484 108 aa2.84□□□□□ -1.96
PCI8YIL071C YOS9Q99220 542 aa2.84□□□□□ -1.96
PCI8YIL071C BLM10P43583 2143 aa2.83□□□□□ -1.96
PCI8YIL071C RPL15AP05748 204 aaKnown RBP2.83□□□□□ -1.96
PCI8YIL071C YSF3P0C074 85 aaPredicted RBP2.83□□□□□ -1.96
PCI8YIL071C DSF1P0CX08 502 aa2.83□□□□□ -1.96
PCI8YIL071C YNR073CP0CX09 502 aa2.83□□□□□ -1.96
PCI8YIL071C MATALPHA1P0CY06 175 aa2.83□□□□□ -1.96
PCI8YIL071C HMLALPHA1P0CY07 175 aa2.83□□□□□ -1.96
PCI8YIL071C SCO1P23833 295 aa2.83□□□□□ -1.96
PCI8YIL071C MRP17P28778 131 aa2.83□□□□□ -1.96
PCI8YIL071C HSP150P32478 413 aa2.83□□□□□ -1.96
PCI8YIL071C FMT1P32785 401 aa2.83□□□□□ -1.96
PCI8YIL071C EMP24P32803 203 aaKnown RBP2.83□□□□□ -1.96
PCI8YIL071C SRY1P36007 326 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms